KCC003124A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003124A_C01 KCC003124A_c01
GATCAGTCGCTGCCTGTGAAGGACCACTACCTTACGCAGGGCAAGTGCCACGTGATCAGC
GCTGTGGCGGCTCCGGACGATGTGTACGGCAAGGTGAAGGTGGTGCTGGAGGGCTTGCAC
GCGCCGAAGAAGGCGGGCGTGACTGCGACAGTTTCGGCTACTCCTGCTGCGGCTGCTTTG
GAGGAGTTTGCGCTGCCGCCCGTGCCCGGCAGCCTGCCTGCCGACGCCCAGATCGTGTTC
GTGCTCGGCGGCCCCGGCAGCGGCAAGGGCACGCAATGCGATCAGATCAAGGAGGAGTAT
GAGTGCGTGCACCTCAGCGCCGGCGACCTGCTGCGCGCTGAGGTGAAGAGCGGCAGCGAG
GTTGGCCAGAAGTGCGAGGCGCTGATGAAGGAGGGCAAGCTCGTGCCGGTGGCTGTCACG
CTCAACCTGCTGAAGCGGGACATGATAGCCAGCGGCGGCAAGTTCTTCCTCATCGACGGC
TTTCCGCGCGCGCTGGACCAGGCGGCGCAGTTTGAGAGCAGCATTATGCCGTGCAAGACG
GTGCTGTTCTTTGACTGCCCGGAGGAGGAGATGGAGAAGCGCCTGCTGAAGCGCGGGGAG
ACCAGCGGCCGCAGCGACGACAACGCCGACACCATTCGCAAGCGCTTCCGCACCTTCCTG
GATCAGTCGCTGCCTGTGAAGGACCACTACCTTACGCAGGGCAAGTGCCACGTGATCAGC
GCTGTGGCGGCTCCGGACGATGTGTACGGCAAGGTGAAGGTGGTGCTGGAGGGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003124A_C01 KCC003124A_c01
         (775 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_330000.1| hypothetical protein [Neurospora crassa] gi|289...   206  4e-52
ref|NP_509884.1| adenylate kinase (22.6 kD) (XL906) [Caenorhabdi...   187  2e-46
ref|NP_850868.1| predicted protein [Arabidopsis thaliana] gi|249...   186  3e-46
gb|AAP31910.1| adenylate kinase [Schistosoma japonicum]               186  3e-46
ref|NP_850867.1| predicted protein [Arabidopsis thaliana]             186  3e-46

>ref|XP_330000.1| hypothetical protein [Neurospora crassa] gi|28926251|gb|EAA35232.1|
           hypothetical protein [Neurospora crassa]
          Length = 225

 Score =  206 bits (523), Expect = 4e-52
 Identities = 107/210 (50%), Positives = 145/210 (68%), Gaps = 8/210 (3%)
 Frame = +1

Query: 154 SATPAAAALEEFALPPVPGSLPADAQIVFVLGGPGSGKGTQCDQIKEEYECVHLSAGDLL 333
           +++ +AAA    A    P   P+D  ++FVLGGPG+GKGTQC ++  +Y   HLSAGDLL
Sbjct: 6   TSSSSAAAAPAPATTTTPAFSPSDVTVIFVLGGPGAGKGTQCARLVRDYGFTHLSAGDLL 65

Query: 334 RAEV-KSGSEVGQKCEALMKEGKLVPVAVTLNLLK---RDMIASG----GKFFLIDGFPR 489
           RAE  + GS+ GQ     +K G +VP+ VT+ LL+   RD + SG    G+F LIDGFPR
Sbjct: 66  RAEQDRPGSQYGQLIRDCIKNGAIVPMEVTVALLENAMRDTLVSGKTKTGRF-LIDGFPR 124

Query: 490 ALDQAAQFESSIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 669
            +DQA +FE  + P K VLF+DCPE+EMEKRLL+RG+TSGR DDNA++IRKRFRTF++ S
Sbjct: 125 KMDQAVKFEEVVCPAKMVLFYDCPEQEMEKRLLERGKTSGREDDNAESIRKRFRTFVETS 184

Query: 670 LPVKDHYLTQGKCHVISAVAAPDDVYGKVK 759
           +PV DHY  +GK   + +   P+ VY + +
Sbjct: 185 MPVVDHYEREGKVVKVDSTPGPEKVYEETR 214

>ref|NP_509884.1| adenylate kinase (22.6 kD) (XL906) [Caenorhabditis elegans]
           gi|20455034|sp|Q20140|KAD1_CAEEL Probable adenylate
           kinase isoenzyme F38B2.4 (ATP-AMP transphosphorylase)
           gi|7500774|pir||T21947 hypothetical protein F38B2.4 -
           Caenorhabditis elegans gi|3876832|emb|CAA90364.1|
           Hypothetical protein F38B2.4 [Caenorhabditis elegans]
           gi|12276048|gb|AAG50236.1|AF304123_1 adenylate kinase 1
           [Caenorhabditis elegans]
          Length = 210

 Score =  187 bits (474), Expect = 2e-46
 Identities = 99/187 (52%), Positives = 126/187 (66%), Gaps = 3/187 (1%)
 Frame = +1

Query: 220 ADAQIVFVLGGPGSGKGTQCDQIKEEYECVHLSAGDLLRAEVKSGSEVGQKCEALMKEGK 399
           A   I F++GGPGSGKGTQCD+I  +Y   HLS+GDLLR EVKSGS  G +  A+M+ G 
Sbjct: 18  AGVPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGA 77

Query: 400 LVPVAVTLNLLKRDM---IASGGKFFLIDGFPRALDQAAQFESSIMPCKTVLFFDCPEEE 570
           LVP+ V L+L+K  M   I  G K FLIDG+PR + Q  QFES I   K VLFFD  EE 
Sbjct: 78  LVPLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFFDVAEET 137

Query: 571 MEKRLLKRGETSGRSDDNADTIRKRFRTFLDQSLPVKDHYLTQGKCHVISAVAAPDDVYG 750
           + KRLL R +TSGR+DDNADTI+KR  TF+  + PV D+Y ++GK   I+A  + DD++ 
Sbjct: 138 LVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIFA 197

Query: 751 KVKVVLE 771
            V   L+
Sbjct: 198 VVVANLD 204

>ref|NP_850868.1| predicted protein [Arabidopsis thaliana]
           gi|2497486|sp|O04905|UMPK_ARATH Uridylate kinase (UK)
           (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP
           kinase) gi|2121275|gb|AAB71135.1| UMP/CMP kinase
           [Arabidopsis thaliana]
          Length = 202

 Score =  186 bits (473), Expect = 3e-46
 Identities = 101/180 (56%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
 Frame = +1

Query: 232 IVFVLGGPGSGKGTQCDQIKEEYECVHLSAGDLLRAEVKSGSEVGQKCEALMKEGKLVPV 411
           ++FVLGGPGSGKGTQC  I E Y   HLSAGDLLRAE+KSGSE G   + ++KEGK+VP 
Sbjct: 16  VIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPS 75

Query: 412 AVTLNLLKRDMIASGGKFFLIDGFPRALDQAAQFE--SSIMPCKTVLFFDCPEEEMEKRL 585
            VT+ LL++ +  +G   FLIDGFPR  +  A FE  + I P K VLFFDCPEEEMEKRL
Sbjct: 76  EVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEP-KFVLFFDCPEEEMEKRL 134

Query: 586 LKRGETSGRSDDNADTIRKRFRTFLDQSLPVKDHYLTQGKCHVISAVAAPDDVYGKVKVV 765
           L  G   GR DDN +TIRKRF+ FL+ SLPV  +Y  +GK   I+A    + V+ +VK +
Sbjct: 135 L--GRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKAI 192

>gb|AAP31910.1| adenylate kinase [Schistosoma japonicum]
          Length = 197

 Score =  186 bits (473), Expect = 3e-46
 Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 2/181 (1%)
 Frame = +1

Query: 220 ADAQIVFVLGGPGSGKGTQCDQIKEEYECVHLSAGDLLRAEVKSGSEVGQKCEALMKEGK 399
           A A+++FVLGGPGSGKGTQC+++  ++   HLS+GDLLRAEV+SGS+ G++ +A+M+ G+
Sbjct: 7   AKAKVIFVLGGPGSGKGTQCEKLVHKFNFNHLSSGDLLRAEVQSGSQKGKELKAMMERGE 66

Query: 400 LVPVAVTLNLLKRDMIASGGK--FFLIDGFPRALDQAAQFESSIMPCKTVLFFDCPEEEM 573
           LVP+ V L+LLK  MI    K   FLIDG+PR LDQ  +FE  + PC  V+ FD  EE M
Sbjct: 67  LVPLEVVLSLLKEAMIKLVDKNCHFLIDGYPRELDQGLKFEKEVCPCLCVINFDVSEEVM 126

Query: 574 EKRLLKRGETSGRSDDNADTIRKRFRTFLDQSLPVKDHYLTQGKCHVISAVAAPDDVYGK 753
            KRLLKR ETS R DDN +TI KRFRTF + + PV ++Y  Q K   I A    DD++ K
Sbjct: 127 RKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEYYKKQNKVITIDASGTVDDIFEK 186

Query: 754 V 756
           +
Sbjct: 187 L 187

>ref|NP_850867.1| predicted protein [Arabidopsis thaliana]
          Length = 208

 Score =  186 bits (473), Expect = 3e-46
 Identities = 101/180 (56%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
 Frame = +1

Query: 232 IVFVLGGPGSGKGTQCDQIKEEYECVHLSAGDLLRAEVKSGSEVGQKCEALMKEGKLVPV 411
           ++FVLGGPGSGKGTQC  I E Y   HLSAGDLLRAE+KSGSE G   + ++KEGK+VP 
Sbjct: 16  VIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPS 75

Query: 412 AVTLNLLKRDMIASGGKFFLIDGFPRALDQAAQFE--SSIMPCKTVLFFDCPEEEMEKRL 585
            VT+ LL++ +  +G   FLIDGFPR  +  A FE  + I P K VLFFDCPEEEMEKRL
Sbjct: 76  EVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEP-KFVLFFDCPEEEMEKRL 134

Query: 586 LKRGETSGRSDDNADTIRKRFRTFLDQSLPVKDHYLTQGKCHVISAVAAPDDVYGKVKVV 765
           L  G   GR DDN +TIRKRF+ FL+ SLPV  +Y  +GK   I+A    + V+ +VK +
Sbjct: 135 L--GRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKAI 192



EST assemble image


clone accession position
1 LCL023e05_r AV627243 1 454
2 MXL089d05_r BP098209 21 385
3 LCL021c10_r AV627114 72 238
4 LCL018d09_r AV626935 95 545
5 MXL001a09_r BP092935 374 775




Chlamydomonas reinhardtii
Kazusa DNA Research Institute