KCC003123A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003123A_C01 KCC003123A_c01
gtccatatgccatacaacgcatgcctattgtgcCTCTGTTGCGTGGTCGTGTTCGTCCTG
TGCTGTGCCCCTCTCCCCTCCTCCCCGTATCCCCCTCCCGTGCGTGCGCGTGTACTTTCC
GTATCCCTCTTCTCCGTCTCCACCTACTGTGCCTATCCAAACGTGCTTGAACGAACGCTC
TAAACAAAGGCAATGTGCATAAAGCTAGTTGTCTGTTTGGCTTGACCTTTCTCGTTTGTA
TTGATCTGTGCAGCTGCGCGCCACACCGGACGCAGCTGCGCTAGATGTGTCCACTGGCGC
TGCTTTGTCGCCTTCGTCTCTCGAGCTGACGGTGCAGCTCCACCCGGCGGCCGCAACCGC
TCCTGCCAACGGTGGCGGCGCCTTCGCCTTCCCACAGGATGCCGCCAAGACCGACAGCTC
GCCCTTCGGCTTCGCCCTTCGGCTTCCCTCCCCTTCCTCAACCCTGCCCAAGATTCGTGC
CTGCGGCGCACGCTCAGAGCTCGGCACCACCAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003123A_C01 KCC003123A_c01
         (513 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD40600.1| OSJNBb0066J23.4 [Oryza sativa (japonica cultivar...    46  2e-04
emb|CAE03677.1| OSJNBa0042N22.21 [Oryza sativa (japonica cultiva...    45  7e-04
gb|AAF32493.1|AF093132_1 kexin-like protease KEX1 [Pneumocystis ...    42  0.003
pir||A86335 T20H2.9 protein - Arabidopsis thaliana gi|8778985|gb...    42  0.006
sp|P13983|EXTN_TOBAC Extensin precursor (Cell wall hydroxyprolin...    42  0.006

>emb|CAD40600.1| OSJNBb0066J23.4 [Oryza sativa (japonica cultivar-group)]
          Length = 1348

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +3

Query: 351  PQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
            P P +P    P+PS   PP P A PS  P   PP P PCP   P   ++ +APP
Sbjct: 912  PSPPVPPPRPPAPSPPAPPPPPAAPSP-PAPSPPPPPPCPSTPPKIRSRHAAPP 964

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 17/44 (38%), Positives = 19/44 (42%)
 Frame = +3

Query: 381  PSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
            P+P    PP P   P   P   PP P P P   P+  A S  PP
Sbjct: 904  PAPPSPPPPSPPVPPPRPPAPSPPAPPP-PPAAPSPPAPSPPPP 946

>emb|CAE03677.1| OSJNBa0042N22.21 [Oryza sativa (japonica cultivar-group)]
          Length = 815

 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHRMPPRPTARPS-ASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           P P +P    P+PS   PP PT  PS  +P   PP P PCP   P   ++ + PP
Sbjct: 452 PSPPVPPPRPPAPSPPAPPPPTPAPSPPAPPAPPPPPPPCPPAPPKTRSRQAPPP 506

>gb|AAF32493.1|AF093132_1 kexin-like protease KEX1 [Pneumocystis carinii f. sp. muris]
          Length = 1011

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 23/61 (37%), Positives = 33/61 (53%), Gaps = 3/61 (4%)
 Frame = +3

Query: 336 SSTRRPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFP---PLPQPCPRFVPAAHAQSSA 506
           +S   PQP   + + P+P  R PP+PT+ P++ P   P   P PQP P+ VP    Q + 
Sbjct: 788 TSEPAPQPTSESTSEPTP--RPPPQPTSEPTSEPTSEPTSEPSPQPTPQPVPQPAPQPAP 845

Query: 507 P 509
           P
Sbjct: 846 P 846

 Score = 35.4 bits (80), Expect = 0.43
 Identities = 21/59 (35%), Positives = 26/59 (43%)
 Frame = +3

Query: 336 SSTRRPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           +S   PQP  P  A P P+ +  P+P  +P A P   PP P P     P       APP
Sbjct: 724 TSEPTPQPAPPQPAPPQPAPQPAPQPAPQP-APPQPAPPQPVPPQPVPPQPMPSRPAPP 781

 Score = 35.0 bits (79), Expect = 0.56
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 351 PQPLLPTVAAPS--PSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           PQP     + P+  P+    P+PT +P   P   P  P+P P+  P   A    PP
Sbjct: 809 PQPTSEPTSEPTSEPTSEPSPQPTPQPVPQPAPQPAPPKPAPKPTPPKPAPKPTPP 864

 Score = 35.0 bits (79), Expect = 0.56
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFP---PLPQPCPRFVPAAHAQSSAPP 512
           +P P  P    P PS   PP+PT +P++ P   P      +P PR  P   ++ ++ P
Sbjct: 762 QPVPPQPVPPQPMPSRPAPPKPTPQPTSEPAPQPTSESTSEPTPRPPPQPTSEPTSEP 819

 Score = 34.3 bits (77), Expect = 0.95
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 342 TRRPQPLL--PTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           TR P P+   PTV  P+PS  + P  + +P++      P PQP P+  P   ++ ++ P
Sbjct: 638 TRSPSPIPGEPTVYLPTPSATISPSVSPQPTSESTS-EPTPQPTPQPTPQPTSEPTSEP 695

 Score = 32.7 bits (73), Expect = 2.8
 Identities = 17/59 (28%), Positives = 31/59 (51%), Gaps = 5/59 (8%)
 Frame = +3

Query: 351 PQPLLPTVAAPSP--SHRMPPRPTARPSASPFGFP---PLPQPCPRFVPAAHAQSSAPP 512
           PQP   + + P+P  + +  P+PT+ P++ P   P   P PQP P+      ++ ++ P
Sbjct: 665 PQPTSESTSEPTPQPTPQPTPQPTSEPTSEPTSEPTSKPTPQPTPQPTSEPTSEPTSEP 723

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 13/39 (33%), Positives = 18/39 (45%)
 Frame = +3

Query: 354 QPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCP 470
           +P       P+P    PP+P  +P+  P   P  PQP P
Sbjct: 722 EPTSEPTPQPAPPQPAPPQPAPQPAPQPAPQPAPPQPAP 760

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = +3

Query: 342 TRRPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFP---------PLPQPCPRFVPAAHA 494
           T +P P  PT   P P+      PT+ P++ P   P         P PQP P+  P    
Sbjct: 700 TSKPTPQ-PT---PQPTSEPTSEPTSEPTSEPTPQPAPPQPAPPQPAPQPAPQPAPQPAP 755

Query: 495 QSSAPP 512
              APP
Sbjct: 756 PQPAPP 761

>pir||A86335 T20H2.9 protein - Arabidopsis thaliana
           gi|8778985|gb|AAF79900.1|AC022472_9 Contains a strong
           similarity to Anther-specific proline-rich protein APG
           precursor from Arabidopsis thaliana gi|728867 and
           contains a Lipase/Acylhydrolase domain with GDSL-like
           motif PF|00657.  ESTs gb|AV531882, gb|AV533240,
           gb|AV534374, gb|AV533394, gb|AV532582, gb|AV533541 come
           from this gene
          Length = 1137

 Score = 41.6 bits (96), Expect = 0.006
 Identities = 19/55 (34%), Positives = 27/55 (48%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           +PQP  P   +PSP    PP+P  +P   P   P  P+P P+  P    + + PP
Sbjct: 104 KPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPP 158

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           +P P+ P    PSP    PP P+++P A     PP P PCP   P    Q   PP
Sbjct: 64  QPWPMNPPTPDPSPKPVAPPGPSSKPVA-----PPGPSPCPS--PPPKPQPKPPP 111

 Score = 37.0 bits (84), Expect = 0.15
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAP 509
           +P P       P PS   PP PT +P   P G PP P P P   P+     S P
Sbjct: 153 KPAPPPAPKPVPCPSPPKPPAPTPKP-VPPHGPPPKPAPAPTPAPSPKPAPSPP 205

 Score = 34.3 bits (77), Expect = 0.95
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHR--MPPRPTARPSASPFGFP-----PLPQPCPRFVPAAHAQSSAP 509
           P P    VA P PS +   PP P+  PS  P   P     P P PCP   P    +   P
Sbjct: 73  PDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPP 132

Query: 510 P 512
           P
Sbjct: 133 P 133

 Score = 33.1 bits (74), Expect = 2.1
 Identities = 18/51 (35%), Positives = 22/51 (42%), Gaps = 7/51 (13%)
 Frame = +3

Query: 381 PSPSHRMPPRPTARPSASPFGFPPLPQP-------CPRFVPAAHAQSSAPP 512
           P P  + PP P+  P  SP   PP PQP       CP   P    + + PP
Sbjct: 103 PKPQPKPPPAPSPSPCPSP---PPKPQPKPVPPPACPPTPPKPQPKPAPPP 150

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 18/53 (33%), Positives = 26/53 (48%), Gaps = 1/53 (1%)
 Frame = +3

Query: 354 QPLLPTVAAPSPSHRMPPRPTARPSASPFGFP-PLPQPCPRFVPAAHAQSSAP 509
           +P+ P   +P PS    P+P   P+ SP   P P P+P P+ VP      + P
Sbjct: 88  KPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPP 140

 Score = 31.6 bits (70), Expect = 6.2
 Identities = 15/42 (35%), Positives = 21/42 (49%), Gaps = 1/42 (2%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMP-PRPTARPSASPFGFPPLPQPCP 470
           +P+P+ P    P+P    P P P   P  +P   PP P+P P
Sbjct: 126 QPKPVPPPACPPTPPKPQPKPAPPPEPKPAP---PPAPKPVP 164

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 2/47 (4%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHRMPPRPTAR--PSASPFGFPPLPQPCPRFVPA 485
           P+P  PT   P P H  PP+P     P+ SP   P  P+P  + +PA
Sbjct: 169 PKPPAPT-PKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENKTIPA 214

>sp|P13983|EXTN_TOBAC Extensin precursor (Cell wall hydroxyproline-rich glycoprotein)
           gi|82169|pir||S06733 hydroxyproline-rich glycoprotein
           precursor - common tobacco gi|19867|emb|CAA32090.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 620

 Score = 41.6 bits (96), Expect = 0.006
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +3

Query: 348 RPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPP-----LPQPCPRFVPAAHAQSSAPP 512
           +P PL PT + P P++  PP PT  P    +  PP      P P P + P   A S  PP
Sbjct: 425 QPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPP 484

 Score = 39.7 bits (91), Expect = 0.023
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = +3

Query: 336 SSTRRPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           S  R+PQP  PT + P P++   P+P+   S  P  + P P P P + P   A S +PP
Sbjct: 255 SPRRQPQP--PTYSPPPPAYAQSPQPSPTYSPPPPTYSP-PPPSPIYSPPPPAYSPSPP 310

 Score = 36.2 bits (82), Expect = 0.25
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
 Frame = +3

Query: 366 PTVAAPSPSHRMPPRPTARPSASPFGFPP-----LPQPCPRFVPAAHAQSSAPP 512
           P    PSP   +PP P  +P    +  PP      PQP P + P     S  PP
Sbjct: 241 PPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPP 294

 Score = 35.0 bits (79), Expect = 0.56
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 354 QPLLPTVAAPSPSH-RMPPRP--TARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           QPL PT + P P    +PP P    RP    +G PP P   P F P    Q  +PP
Sbjct: 496 QPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTYGQPPSP---PTFSPPPPRQIHSPP 548

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPP-----LPQPCPRFVPAAHAQSSAPP 512
           P P  PT + P P++  PP   A+P   P  + P      P P P + P     S  PP
Sbjct: 402 PLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPP 460

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHRMPP-RPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAP 509
           PQP  PT + P P++  PP  P   P    +   P P P P F P   A S  P
Sbjct: 276 PQPS-PTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPP 328

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 342 TRRPQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQ--PCPRFVPAAHAQSSAPP 512
           T  P P  P  + P P +  PP P+  P    +  PP P   P P F P       +PP
Sbjct: 336 TYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPP 394

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = +3

Query: 351 PQPLLPTVAAPSPSHRMPPRPTARPSASPFGFPPLPQPCPRFVPAAHAQSSAPP 512
           P P       PSP++  PP   + P  SP   PP P   P   P      S PP
Sbjct: 268 PPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPP 321

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 19/62 (30%), Positives = 28/62 (44%), Gaps = 5/62 (8%)
 Frame = +3

Query: 342 TRRPQPLLPTVAAPSPSHRMPPRPTARPSASP----FGFPP-LPQPCPRFVPAAHAQSSA 506
           T  P P  P  + P P++   P PT  P+ SP    +  PP    P P ++P   +   +
Sbjct: 288 TYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYS 347

Query: 507 PP 512
           PP
Sbjct: 348 PP 349



EST assemble image


clone accession position
1 LCL074a08_r AV630142 1 307
2 LCL018b12_r AV626927 34 513




Chlamydomonas reinhardtii
Kazusa DNA Research Institute