KCC003121A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003121A_C01 KCC003121A_c01
gaactctgtCATGTTACACAACCTCAGCTGCTGATGCTTTCATCGACCTGGTAACACTTT
GCGCCTGCACATTTGTGCATCGGGCACTATAGCCTTGCAAAGCTGCGAAAGAATACCCAC
ACACTGCCACACATATCAGCTCTCGTACAGCCATACACCATCGTTCAGTGCCACCATCAT
GGCTTTGTAACCCGTAACACGAACGGCTCGCAAATGCAAACCCCGGCAAGCCAACCTCTC
AACGACACGCGCATACGGTATGCCATATGCGCTAGTAAGACATGCATGTACAAGTCCCAC
AGCGTGACATGAAACATCGAACCTTGTGAACTGTCTACACACTAAAATTCATAGGCCAGC
ACGACTGAGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003121A_C01 KCC003121A_c01
         (370 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC04906.1| unnamed protein product [Homo sapiens]                 33  0.76
dbj|BAC11260.1| unnamed protein product [Homo sapiens]                 31  3.8
emb|CAD38913.1| hypothetical protein [Homo sapiens]                    31  3.8
dbj|BAB71506.1| unnamed protein product [Homo sapiens]                 31  3.8
ref|NP_653189.2| hypothetical protein FLJ32919 [Homo sapiens] gi...    31  3.8

>dbj|BAC04906.1| unnamed protein product [Homo sapiens]
          Length = 226

 Score = 33.5 bits (75), Expect = 0.76
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 116 PTHCHTYQLSYSHTPSFSATIMAL*PVTRTARKCKPRQANLSTTRAYGMPYALVRHAC 289
           PTH HT+ L++SHT   +       P+T T+    P   N+  T+       ++ H C
Sbjct: 166 PTHTHTHALTHSHTHIHTHMHSHTHPLTHTSTHTHPHTHNVWLTQDLVFMLMILAHPC 223

>dbj|BAC11260.1| unnamed protein product [Homo sapiens]
          Length = 404

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
 Frame = -2

Query: 192 GYKAMMVALNDGVWLYES*Y---VWQCVGILSQLCKAIVPDAQMCRRK 58
           G   + + LN+G W         V   +G L ++C+A +PD+++ RRK
Sbjct: 79  GLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRK 126

>emb|CAD38913.1| hypothetical protein [Homo sapiens]
          Length = 394

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
 Frame = -2

Query: 192 GYKAMMVALNDGVWLYES*Y---VWQCVGILSQLCKAIVPDAQMCRRK 58
           G   + + LN+G W         V   +G L ++C+A +PD+++ RRK
Sbjct: 57  GLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRK 104

>dbj|BAB71506.1| unnamed protein product [Homo sapiens]
          Length = 285

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
 Frame = -2

Query: 192 GYKAMMVALNDGVWLYES*Y---VWQCVGILSQLCKAIVPDAQMCRRK 58
           G   + + LN+G W         V   +G L ++C+A +PD+++ RRK
Sbjct: 11  GLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRK 58

>ref|NP_653189.2| hypothetical protein FLJ32919 [Homo sapiens]
           gi|21040490|gb|AAH30621.1| Hypothetical protein FLJ32919
           [Homo sapiens]
          Length = 343

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
 Frame = -2

Query: 192 GYKAMMVALNDGVWLYES*Y---VWQCVGILSQLCKAIVPDAQMCRRK 58
           G   + + LN+G W         V   +G L ++C+A +PD+++ RRK
Sbjct: 11  GLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRK 58



EST assemble image


clone accession position
1 MXL096h02_r BP098644 1 416
2 LCL018b09_r AV626924 55 363




Chlamydomonas reinhardtii
Kazusa DNA Research Institute