KCC003115A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003115A_C01 KCC003115A_c01
gcaagggtggaaACGGCGTGGTGCGCATTGCTAAGAACCTAATCACGGGCGAGGAGTACG
CCTGCAAGAGCATCCGCAAGGTCTTAACGGATGCTAGCGAGAAGAAGAAGCAGGGCCATC
TAGACAGCATCCGGCGCGAGATTCAGGTCATGACCAAGCTCAGCGGCAGCCTAAACATTG
TAAAGCTGGAGGACGTGTTTGAGGACGAGGAGAACGTCCACATCGTGATGGAACACTGCG
CGGGCGGCGAGCTGTGGCACCGCATCGGCGACAGCCACTACTCTGAGCGCACGGTTGCCT
CGTTCATGCGTGCCGTGCTGCGCACGTTGGCCCAGTGCCATGCACAGCACATCCTGCACC
GCGACATCAAGCCGGGCAACTTCATGCTGCTGTCCGGCGACGACCGCGCGCCGCTCAAGG
CCATTGACTTCGGTTTGGCGGCGCCCTTCGACCCGGAGCAGCTGCCGCGCACGGATTTGG
GGCTGGAGGGCACGCCCTGGTATATGGCGCCCGAGACGCTGCGCGGCGAGTGGCTGCCGT
CTAGCGACCTCTGGGCTGCGGGCGTGATGGCGTTCCAGATGCTGTGCGGCCGCTTCCCCT
TCGACGACAAGAAGAACGTGTACGCGCCCGCCATCACCGCCATCTGGCGCTCCGTGCTCA
ACGACGAGCTGGACTTTGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003115A_C01 KCC003115A_c01
         (679 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_197437.1| calcium-dependent protein kinase, putative (CDP...   176  4e-43
gb|AAN17388.1| Putative calcium dependent protein kinase [Oryza ...   173  2e-42
dbj|BAA85396.1| ESTs C22369(C12239),C22370(C12239), AU057852(S21...   173  2e-42
gb|AAC05270.1| calcium dependent protein kinase [Oryza sativa]        173  2e-42
ref|NP_196779.1| calcium-dependent protein kinase, putative (CDP...   173  2e-42

>ref|NP_197437.1| calcium-dependent protein kinase, putative (CDPK) [Arabidopsis
           thaliana]
          Length = 523

 Score =  176 bits (445), Expect = 4e-43
 Identities = 89/226 (39%), Positives = 145/226 (63%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3   KGGNGVVRIAKNLITGEEYACKSIRKVLTDASEKKKQGHLDSIRREIQVMTKLSGSLNIV 182
           +G  GV  +     TG ++ACK+I K      +   +  ++ +RRE+Q+M  L+G  NIV
Sbjct: 76  RGQFGVTHLCTQKATGLQFACKTIAK-----RKLVNKEDIEDVRREVQIMHHLTGQPNIV 130

Query: 183 KLEDVFEDEENVHIVMEHCAGGELWHRI-GDSHYSERTVASFMRAVLRTLAQCHAQHILH 359
           +L+  +ED+ +VH+VME CAGGEL+ RI    HYSER  AS +R +++ +  CH+  ++H
Sbjct: 131 ELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIIHTCHSMGVIH 190

Query: 360 RDIKPGNFMLLSGDDRAPLKAIDFGLAAPFDPEQLPRTDLGLEGTPWYMAPETLRGEWLP 539
           RD+KP NF+LLS D+ +PLKA DFGL+  + P ++ +    + G+ +Y+APE LR ++ P
Sbjct: 191 RDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFK---DIVGSAYYIAPEVLRRKYGP 247

Query: 540 SSDLWAAGVMAFQMLCGRFPFDDKKNVYAPAITAIWRSVLNDELDF 677
            +D+W+ GVM + +LCG  PF      +A +   I+ ++L+ ++DF
Sbjct: 248 EADIWSIGVMLYILLCGVPPF------WAESENGIFNAILSGQVDF 287

>gb|AAN17388.1| Putative calcium dependent protein kinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 570

 Score =  173 bits (439), Expect = 2e-42
 Identities = 98/228 (42%), Positives = 140/228 (60%), Gaps = 3/228 (1%)
 Frame = +3

Query: 3   KGGNGVVRIAKNLITGEEYACKSI--RKVLTDASEKKKQGHLDSIRREIQVMTKLSGSLN 176
           +G  G   +   + TG EYACK+I  RK++T          ++ +RREIQ+M  LSG  N
Sbjct: 87  QGQFGTTYLCTEINTGCEYACKTIPKRKLITKED-------VEDVRREIQIMHHLSGHKN 139

Query: 177 IVKLEDVFEDEENVHIVMEHCAGGELWHRIGDS-HYSERTVASFMRAVLRTLAQCHAQHI 353
           +V ++DV+ED + VHIVME CAGGEL+ RI +  HYSER  A  +R ++  +A CH+  +
Sbjct: 140 VVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGV 199

Query: 354 LHRDIKPGNFMLLSGDDRAPLKAIDFGLAAPFDPEQLPRTDLGLEGTPWYMAPETLRGEW 533
           +HRD+KP NF+LL  DD   +KAIDFGL+  F P Q+      L G+P+Y+APE L   +
Sbjct: 200 MHRDLKPENFLLLDKDDDLSIKAIDFGLSVFFKPGQV---FTELVGSPYYVAPEVLHKRY 256

Query: 534 LPSSDLWAAGVMAFQMLCGRFPFDDKKNVYAPAITAIWRSVLNDELDF 677
            P SD+W+AGV+ + +L G  PF      +A     I+ +VL   +DF
Sbjct: 257 GPESDVWSAGVILYVLLSGVPPF------WAETQQGIFDAVLKGHIDF 298

>dbj|BAA85396.1| ESTs C22369(C12239),C22370(C12239),
           AU057852(S21844),AU057853(S21844) correspond to a region
           of the predicted gene.~similar to calcium dependent
           protein kinase. (AF048691) [Oryza sativa (japonica
           cultivar-group)] gi|26224784|gb|AAN76358.1|
           calcium-dependent protein kinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 542

 Score =  173 bits (439), Expect = 2e-42
 Identities = 98/228 (42%), Positives = 140/228 (60%), Gaps = 3/228 (1%)
 Frame = +3

Query: 3   KGGNGVVRIAKNLITGEEYACKSI--RKVLTDASEKKKQGHLDSIRREIQVMTKLSGSLN 176
           +G  G   +   + TG EYACK+I  RK++T          ++ +RREIQ+M  LSG  N
Sbjct: 87  QGQFGTTYLCTEINTGCEYACKTIPKRKLITKED-------VEDVRREIQIMHHLSGHKN 139

Query: 177 IVKLEDVFEDEENVHIVMEHCAGGELWHRIGDS-HYSERTVASFMRAVLRTLAQCHAQHI 353
           +V ++DV+ED + VHIVME CAGGEL+ RI +  HYSER  A  +R ++  +A CH+  +
Sbjct: 140 VVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGV 199

Query: 354 LHRDIKPGNFMLLSGDDRAPLKAIDFGLAAPFDPEQLPRTDLGLEGTPWYMAPETLRGEW 533
           +HRD+KP NF+LL  DD   +KAIDFGL+  F P Q+      L G+P+Y+APE L   +
Sbjct: 200 MHRDLKPENFLLLDKDDDLSIKAIDFGLSVFFKPGQV---FTELVGSPYYVAPEVLHKRY 256

Query: 534 LPSSDLWAAGVMAFQMLCGRFPFDDKKNVYAPAITAIWRSVLNDELDF 677
            P SD+W+AGV+ + +L G  PF      +A     I+ +VL   +DF
Sbjct: 257 GPESDVWSAGVILYVLLSGVPPF------WAETQQGIFDAVLKGHIDF 298

>gb|AAC05270.1| calcium dependent protein kinase [Oryza sativa]
          Length = 542

 Score =  173 bits (439), Expect = 2e-42
 Identities = 98/228 (42%), Positives = 140/228 (60%), Gaps = 3/228 (1%)
 Frame = +3

Query: 3   KGGNGVVRIAKNLITGEEYACKSI--RKVLTDASEKKKQGHLDSIRREIQVMTKLSGSLN 176
           +G  G   +   + TG EYACK+I  RK++T          ++ +RREIQ+M  LSG  N
Sbjct: 87  QGQFGTTYLCTEINTGCEYACKTIPKRKLITKED-------VEDVRREIQIMHHLSGHKN 139

Query: 177 IVKLEDVFEDEENVHIVMEHCAGGELWHRIGDS-HYSERTVASFMRAVLRTLAQCHAQHI 353
           +V ++DV+ED + VHIVME CAGGEL+ RI +  HYSER  A  +R ++  +A CH+  +
Sbjct: 140 VVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGV 199

Query: 354 LHRDIKPGNFMLLSGDDRAPLKAIDFGLAAPFDPEQLPRTDLGLEGTPWYMAPETLRGEW 533
           +HRD+KP NF+LL  DD   +KAIDFGL+  F P Q+      L G+P+Y+APE L   +
Sbjct: 200 MHRDLKPENFLLLDKDDDLSIKAIDFGLSVFFKPGQV---FTELVGSPYYVAPEVLHKRY 256

Query: 534 LPSSDLWAAGVMAFQMLCGRFPFDDKKNVYAPAITAIWRSVLNDELDF 677
            P SD+W+AGV+ + +L G  PF      +A     I+ +VL   +DF
Sbjct: 257 GPESDVWSAGVILYVLLSGVPPF------WAETQQGIFDAVLKGHIDF 298

>ref|NP_196779.1| calcium-dependent protein kinase, putative (CDPK) [Arabidopsis
           thaliana] gi|9759385|dbj|BAB10036.1| calcium-dependent
           protein kinase [Arabidopsis thaliana]
          Length = 528

 Score =  173 bits (438), Expect = 2e-42
 Identities = 87/226 (38%), Positives = 143/226 (62%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3   KGGNGVVRIAKNLITGEEYACKSIRKVLTDASEKKKQGHLDSIRREIQVMTKLSGSLNIV 182
           +G  GV  +     TG ++ACK+I K      +   +  ++ +RRE+Q+M  L+G  NIV
Sbjct: 81  RGQFGVTHLCTQKATGHQFACKTIAK-----RKLVNKEDIEDVRREVQIMHHLTGQPNIV 135

Query: 183 KLEDVFEDEENVHIVMEHCAGGELWHRI-GDSHYSERTVASFMRAVLRTLAQCHAQHILH 359
           +L+  +ED+ +VH+VME CAGGEL+ RI    HYSER  AS +R +++ +  CH+  ++H
Sbjct: 136 ELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIH 195

Query: 360 RDIKPGNFMLLSGDDRAPLKAIDFGLAAPFDPEQLPRTDLGLEGTPWYMAPETLRGEWLP 539
           RD+KP NF+LL+ D+ +PLKA DFGL+  + P ++ +    + G+ +Y+APE L+ ++ P
Sbjct: 196 RDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFK---DIVGSAYYIAPEVLKRKYGP 252

Query: 540 SSDLWAAGVMAFQMLCGRFPFDDKKNVYAPAITAIWRSVLNDELDF 677
            +D+W+ GVM + +LCG  PF      +A +   I+ ++L   +DF
Sbjct: 253 EADIWSIGVMLYILLCGVPPF------WAESENGIFNAILRGHVDF 292



EST assemble image


clone accession position
1 LCL092h08_r AV631377 1 410
2 MXL084e04_r BP097977 13 401
3 LCL017a07_r AV626871 184 292
4 LCL033f02_r AV627899 201 679




Chlamydomonas reinhardtii
Kazusa DNA Research Institute