Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003110A_C01 KCC003110A_c01
(482 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194858.1| 20S proteasome beta subunit A (PBA1) [Arabidops... 108 4e-23
gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome ... 107 7e-23
sp|P93395|PSB6_TOBAC Proteasome subunit beta type 6 precursor (P... 106 1e-22
dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa (... 103 1e-21
gb|AAP80693.1| proteasome subunit [Griffithsia japonica] 102 2e-21
>ref|NP_194858.1| 20S proteasome beta subunit A (PBA1) [Arabidopsis thaliana]
gi|7435895|pir||T04497 C 3.4.25.1 proteasome
endopeptidase complex () chain PBA1 [imported] -
Arabidopsis thaliana gi|2511594|emb|CAA74028.1|
multicatalytic endopeptidase complex, proteasome
precursor, beta subunit [Arabidopsis thaliana]
gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase
complex, proteasome precursor, beta subunit [Arabidopsis
thaliana] gi|3421099|gb|AAC32065.1| 20S proteasome
subunit PBA1 [Arabidopsis thaliana]
gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase
complex, proteasome precursor, beta subunit [Arabidopsis
thaliana] gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120
[Arabidopsis thaliana] gi|16323318|gb|AAL15414.1|
AT4g31300/F8F16_120 [Arabidopsis thaliana]
Length = 233
Score = 108 bits (269), Expect = 4e-23
Identities = 51/81 (62%), Positives = 63/81 (76%)
Frame = +2
Query: 239 PVSMGTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAI 418
P SMGTTII VT+NGGV+L ADSRTSTG Y+ANR +DKIT L DNVY RSGSAAD+Q +
Sbjct: 8 PHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVV 67
Query: 419 AGYVQHFIAQHQAEEGEHINV 481
+ YV++F+ QH + G+ V
Sbjct: 68 SDYVRYFLHQHTIQHGQPATV 88
>gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
Length = 223
Score = 107 bits (267), Expect = 7e-23
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +2
Query: 248 MGTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAIAGY 427
MGTTII VT+NGGV+L ADSRTSTG Y+ANR +DKIT L DNVY RSGSAAD+Q ++ Y
Sbjct: 1 MGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDY 60
Query: 428 VQHFIAQHQAEEGEHINV 481
V+HF+ QH + G+ V
Sbjct: 61 VRHFLHQHTIQHGQPATV 78
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type 6 precursor (Proteasome delta chain)
(Tobacco cryptogein-induced protein 7) (tcI 7)
gi|7435893|pir||T03985 C 3.4.25.1 proteasome
endopeptidase complex () delta chain - common tobacco
gi|1743356|emb|CAA70699.1| proteasome delta subunit
[Nicotiana tabacum]
Length = 234
Score = 106 bits (265), Expect = 1e-22
Identities = 51/81 (62%), Positives = 63/81 (76%)
Frame = +2
Query: 239 PVSMGTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAI 418
P SMGTTII VT+NGGV+L ADSRTSTG Y+ANR +DKIT L DNVY RSGSAAD+Q +
Sbjct: 9 PHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIV 68
Query: 419 AGYVQHFIAQHQAEEGEHINV 481
+ YV++F+ QH + G+ V
Sbjct: 69 SDYVRYFLHQHTIQLGQPATV 89
>dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa (japonica
cultivar-group)]
Length = 246
Score = 103 bits (256), Expect = 1e-21
Identities = 51/84 (60%), Positives = 63/84 (74%)
Frame = +2
Query: 230 TSTPVSMGTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADT 409
TS MGTTI+ V ++GGV+LAADSRTSTG Y+ANR +DKIT L DNVY RSGSAADT
Sbjct: 18 TSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADT 77
Query: 410 QAIAGYVQHFIAQHQAEEGEHINV 481
Q I+ YV++F+ QH + G+ V
Sbjct: 78 QVISDYVRYFLHQHTIQLGQPATV 101
>gb|AAP80693.1| proteasome subunit [Griffithsia japonica]
Length = 220
Score = 102 bits (255), Expect = 2e-21
Identities = 46/75 (61%), Positives = 63/75 (83%)
Frame = +2
Query: 245 SMGTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAIAG 424
SMGT+I+AVTF+GGV++ ADSRT+TG+YIANRV+DKITP+ D ++ RSGSAADTQ I+
Sbjct: 18 SMGTSIMAVTFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFVCRSGSAADTQIISD 77
Query: 425 YVQHFIAQHQAEEGE 469
Y +++++ H E GE
Sbjct: 78 YCRYYLSMHHIELGE 92
