KCC003109A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003109A_C01 KCC003109A_c01
ctgcctccccccgtggaggagtcgcaggtgctgccggtgctgcgcgcgctgcagggcgcc
gccaagcccGTCATCTACTACGGCGGCGGCTGCCTGGACGCGCAGGCGGAGCTGCGCGAG
TTCGCGGCGCGCACCGGCATCCCGCTGGCCAGCACCTTCATGGGGCTGGGCGTGGTGCCG
TCCACCGACCCCAACCACCTCCAAATGCTGGGCATGCACGGCACCGTGTTCGCCAACTAC
GCGGTGGACCAGGCCGACCTGCTGGTGGCGCTGGGCGTGCGCTTCGACGACCGCGTCACC
GGCAAGCTGGACGCCTTCGCGGCGCGCGCGCGCATCGTGCACATCGACATTGACGCTGCC
GAGATCAGCAAGAACAAGACCGCGCACGTGCCGGTGTGTGGCGACGTGAAGCAGGCGCTC
AGCCACCTGAACCGCCTGCTGGCCGCGGAGCCGCTGCCCGCAGACAAGTGGGCGGGCTGG
CGCGCCGAGCTGGCGGCCAAGCGCGCCGAGTTCCCCATGCGCTACCCGCAGCGCGACGAC
GCCATTGTGCCGCAGCACGCCATCCAGGTGCTGGGCGAGGAGACGCAGGGCGAGGCCATC
ATTACCACGGGCGTGGGCCAGCACCAGATGTGGGCGGCGCAGTGGTACCCCTA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003109A_C01 KCC003109A_c01
         (653 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07912 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas ...   440  e-122
pir||T07941 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas ...   439  e-122
pir||T07968 acetolactate synthase (EC 4.1.3.18) - Volvox carteri...   392  e-108
pir||T08085 acetolactate synthase (EC 4.1.3.18) precursor - Volv...   385  e-106
sp|P27819|ILV3_BRANA Acetolactate synthase III, chloroplast prec...   254  8e-67

>pir||T07912 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas reinhardtii
           gi|2435505|gb|AAB88292.1| acetolactate synthase
           [Chlamydomonas reinhardtii]
          Length = 683

 Score =  440 bits (1131), Expect = e-122
 Identities = 217/217 (100%), Positives = 217/217 (100%)
 Frame = +1

Query: 1   LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 180
           LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP
Sbjct: 281 LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 340

Query: 181 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 360
           STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA
Sbjct: 341 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 400

Query: 361 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 540
           EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD
Sbjct: 401 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 460

Query: 541 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 651
           AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP
Sbjct: 461 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 497

>pir||T07941 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas reinhardtii
           gi|2906139|gb|AAC03784.1| acetolactate synthase
           [Chlamydomonas reinhardtii]
          Length = 683

 Score =  439 bits (1128), Expect = e-122
 Identities = 216/217 (99%), Positives = 217/217 (99%)
 Frame = +1

Query: 1   LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 180
           LPPPVEESQVLPV+RALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP
Sbjct: 281 LPPPVEESQVLPVVRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 340

Query: 181 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 360
           STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA
Sbjct: 341 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 400

Query: 361 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 540
           EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD
Sbjct: 401 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 460

Query: 541 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 651
           AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP
Sbjct: 461 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 497

>pir||T07968 acetolactate synthase (EC 4.1.3.18) - Volvox carteri
           gi|2565317|gb|AAB88296.1| acetolactate synthase [Volvox
           carteri]
          Length = 681

 Score =  392 bits (1007), Expect = e-108
 Identities = 191/217 (88%), Positives = 207/217 (95%)
 Frame = +1

Query: 1   LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 180
           LPPPVEESQ++PVLRA+Q A+KPVIYYGGGCLDA+ ELREFAARTGIPLASTFMGLGVVP
Sbjct: 280 LPPPVEESQMIPVLRAIQSASKPVIYYGGGCLDARDELREFAARTGIPLASTFMGLGVVP 339

Query: 181 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 360
           + DPNHLQMLGMHGTV ANYAVDQADLLVALGVRFDDRVTG+LDAFA+RARIVH+DIDAA
Sbjct: 340 AEDPNHLQMLGMHGTVAANYAVDQADLLVALGVRFDDRVTGRLDAFASRARIVHVDIDAA 399

Query: 361 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 540
           EISKNKTAHVPVCGDVKQAL HLNR+L AEPL +D++  WRAELAAKRAEFP+RYPQRDD
Sbjct: 400 EISKNKTAHVPVCGDVKQALRHLNRMLEAEPL-SDRFVAWRAELAAKRAEFPLRYPQRDD 458

Query: 541 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 651
           AIVPQ+AIQVLGEET+GE IITTGVGQHQMWAAQWYP
Sbjct: 459 AIVPQYAIQVLGEETKGEVIITTGVGQHQMWAAQWYP 495

>pir||T08085 acetolactate synthase (EC 4.1.3.18) precursor - Volvox carteri
           gi|2921777|gb|AAC04854.1| acetolactate synthase [Volvox
           carteri]
          Length = 681

 Score =  385 bits (989), Expect = e-106
 Identities = 187/217 (86%), Positives = 204/217 (93%)
 Frame = +1

Query: 1   LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 180
           LPPPVEE +++PVLRA+Q A KP+IYYGGGCLDA+ ELREFAARTGIPLAS FMGLGVVP
Sbjct: 280 LPPPVEEYKMIPVLRAIQSATKPIIYYGGGCLDARNELREFAARTGIPLASKFMGLGVVP 339

Query: 181 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 360
           + DPNHLQMLGMHGTV ANYAVDQADLLVALGVRFDDRVTG+LDAFA+RARIVH+DIDAA
Sbjct: 340 AEDPNHLQMLGMHGTVAANYAVDQADLLVALGVRFDDRVTGRLDAFASRARIVHVDIDAA 399

Query: 361 EISKNKTAHVPVCGDVKQALSHLNRLLAAEPLPADKWAGWRAELAAKRAEFPMRYPQRDD 540
           EISKNKTAHVPVCGDVKQAL HLNR+L AEPL +D++  WRAELAAKRAEFP+RYPQRDD
Sbjct: 400 EISKNKTAHVPVCGDVKQALRHLNRMLEAEPL-SDRFVAWRAELAAKRAEFPLRYPQRDD 458

Query: 541 AIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWYP 651
           AIVPQ+AIQVLGEET+GE IITTGVGQHQMWAAQWYP
Sbjct: 459 AIVPQYAIQVLGEETKGEVIITTGVGQHQMWAAQWYP 495

>sp|P27819|ILV3_BRANA Acetolactate synthase III, chloroplast precursor (Acetohydroxy-acid
           synthase III) (ALS III) gi|320131|pir||S29838
           acetolactate synthase (EC 4.1.3.18) 3 precursor - rape
           gi|17776|emb|CAA77615.1| acetohydroxyacid synthase III
           [Brassica napus]
          Length = 652

 Score =  254 bits (649), Expect = 8e-67
 Identities = 131/218 (60%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
 Frame = +1

Query: 1   LPPPVEESQVLPVLRALQGAAKPVIYYGGGCLDAQAELREFAARTGIPLASTFMGLGVVP 180
           LP P E SQ+  ++R +  + +PV+Y GGG L++  EL  F   TGIP+AST MGLG  P
Sbjct: 262 LPQPPEVSQLGQIVRLISESKRPVLYVGGGSLNSSEELGRFVELTGIPVASTLMGLGSYP 321

Query: 181 STDPNHLQMLGMHGTVFANYAVDQADLLVALGVRFDDRVTGKLDAFAARARIVHIDIDAA 360
             D   LQMLGMHGTV+ANYAV+ +DLL+A GVRFDDRVTGKL+AFA+RA+IVHIDID+A
Sbjct: 322 CNDELSLQMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSA 381

Query: 361 EISKNKTAHVPVCGDVKQALSHLNRLL--AAEPLPADKWAGWRAELAAKRAEFPMRYPQR 534
           EI KNKT HV VCGDVK AL  +N++L   AE L  D +  WR+EL+ ++ +FP+ +   
Sbjct: 382 EIGKNKTPHVSVCGDVKLALQGMNKVLENRAEELKLD-FGVWRSELSEQKQKFPLSFKTF 440

Query: 535 DDAIVPQHAIQVLGEETQGEAIITTGVGQHQMWAAQWY 648
            +AI PQ+AIQVL E TQG+AII+TGVGQHQMWAAQ+Y
Sbjct: 441 GEAIPPQYAIQVLDELTQGKAIISTGVGQHQMWAAQFY 478



EST assemble image


clone accession position
1 LCL015b07_r AV626769 1 536
2 MX036e05_r BP087529 70 434
3 MX020a02_r BP086909 258 653




Chlamydomonas reinhardtii
Kazusa DNA Research Institute