KCC003105A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC003105A_C01 KCC003105A_c01
ccaccagcaccccgcccgccacagcggcccctgcggccggcagcgggccaaagcctggtg
gctCGGCAGCGACAACAGTGCCAGGGGGGACAGCTGTCGCTGCCTCGGCCCCTCTGCCCG
AGCTGCCCGCTGGTGTGGAGGCCGAGGCGGCACTACTGGCAGCTTTCAGCGAGGCGCCCA
CAGTCAGCAAGGCGGTGGTGCGCTCGGCGTCATCTAGCGGCGTGGTGCTGACGGCCACAG
TGCAGCAGAGGAACCTCCCTAACAACTCCCAGCGCCGCTACAACATTATGGCGGTGCTGC
CGGGAGGCGGAGTGGGGCCGGCCGTGGTGGGGCTCCCACAGGAGCTGAATGCAGACACTC
AACTTGTTAGTGTTTCACCTTCAGGCAGCCAGCAGCTGGTGGCGGTCAAGGGGCCGAACG
ACGCCACCAGTGTGATGCTGCAGCTGTGGCGGGGTGCCCGGGTTGTGATTGAGCTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003105A_C01 KCC003105A_c01
(476 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB89999.1| B1114B07.8 [Oryza sativa (japonica cultivar-group)] 53 2e-06
pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans 44 4e-06
gb|AAK30591.1|AF350262_1 major ampullate spidroin 1 [Argiope aur... 44 7e-04
ref|ZP_00044668.1| COG2274: ABC-type bacteriocin/lantibiotic exp... 44 7e-04
ref|ZP_00010929.1| COG0811: Biopolymer transport proteins [Rhodo... 44 0.001
>dbj|BAB89999.1| B1114B07.8 [Oryza sativa (japonica cultivar-group)]
Length = 373
Score = 52.8 bits (125), Expect = 2e-06
Identities = 39/112 (34%), Positives = 49/112 (42%), Gaps = 6/112 (5%)
Frame = +2
Query: 17 RHSGPCGRQRAKAWWLGSDNSARGDSCRCLGPSARAARWCGGRGGTTGSFQRGAHSQQGG 196
RH+ G R K +W S +S SC G R GG G G GA + G
Sbjct: 168 RHAIATGNDRTKTYWAPSSSSP---SCGGGGREGNGGRLTGGSSGDDGGSDGGARRRGSG 224
Query: 197 GALGVI*RRGADGHSAAEEPP*QLPAPL-QHYGGAAGRR-----SGAGRGGA 334
G RRG G +A E + A + +HYGGAA +R +GAGR A
Sbjct: 225 GTAARERRRGGTGTTARERRRGSMKAAVRRHYGGAAVKREVMDGNGAGREAA 276
>pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans
Length = 1585
Score = 43.9 bits (102), Expect(2) = 4e-06
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +2
Query: 137 GGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q------LPAPLQHYGGA 298
GG GG++ + G+ S GGG+ G G G SAA PP PAP GG
Sbjct: 819 GGGGGSSRGYSEGSSSGGGGGSSG-----GYSGGSAAPPPPPPPPPPAPAPAPAPSSGGY 873
Query: 299 AGRRSG---AGRGGAPTGAECRHSTC*CFTFRQPAAGGGQGAERRHQCDAAAVAGCP 460
+G SG AG GG +G S ++GGG G+ + +AA+ P
Sbjct: 874 SGGSSGGSAAGGGGGSSGGYSGGS----------SSGGGGGSSGGYSGGSAALPPPP 920
Score = 42.0 bits (97), Expect(2) = 4e-05
Identities = 31/84 (36%), Positives = 38/84 (44%), Gaps = 15/84 (17%)
Frame = +2
Query: 137 GGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAA------------EEPP*QLPAPL 280
GG GG++G + G+ S GGG+ G G G SAA PP PAP
Sbjct: 884 GGGGGSSGGYSGGSSSGGGGGSSG-----GYSGGSAALPPPPPPPPPPPPPPPAPAPAPA 938
Query: 281 QHYGGAAGRRSG---AGRGGAPTG 343
GG +G SG AG GG +G
Sbjct: 939 PSSGGYSGASSGGSAAGGGGGSSG 962
Score = 38.1 bits (87), Expect(2) = 0.006
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*QLPAPLQ-- 283
P A A GG +G G+ + GGG+ G G G SAA PP PAP
Sbjct: 1392 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPAPAPAPAP 1446
Query: 284 HYGGAAGRRSG---AGRGGAPTG 343
GG +G SG AG GG +G
Sbjct: 1447 SSGGYSGGSSGGSAAGGGGGSSG 1469
Score = 37.4 bits (85), Expect(2) = 0.006
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q------LP 271
P A A GG +G G+ + GGG+ G G G SAA PP P
Sbjct: 985 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPAPAP 1039
Query: 272 APLQHYGGAAGRRSG---AGRGGAPTGAECRHST 364
AP GG +G SG AG GG +G ST
Sbjct: 1040 APAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGST 1073
Score = 36.6 bits (83), Expect(2) = 0.033
Identities = 31/87 (35%), Positives = 37/87 (41%), Gaps = 9/87 (10%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q------LP 271
P A A GG +G G+ + GGG+ G G G SAA PP P
Sbjct: 1086 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPAPAP 1140
Query: 272 APLQHYGGAAGRRSG---AGRGGAPTG 343
AP GG +G SG AG GG +G
Sbjct: 1141 APAPSSGGYSGGSSGGSAAGGGGGSSG 1167
Score = 36.2 bits (82), Expect = 0.20
Identities = 34/112 (30%), Positives = 43/112 (38%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*QLPAPLQHY 289
P A A GG +G G+ + GGG+ G G G SAA PP P P
Sbjct: 1135 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPPPAP 1189
Query: 290 GGAAGRRSGAGRGGAPTGAECRHSTC*CFTFRQPAAGGGQGAERRHQCDAAA 445
A SG GG+ G+ AAGGG G+ + +AA
Sbjct: 1190 APAPAPSSGGYSGGSSGGS---------------AAGGGGGSSGGYSGGSAA 1226
Score = 35.8 bits (81), Expect(2) = 0.055
Identities = 31/89 (34%), Positives = 37/89 (40%), Gaps = 11/89 (12%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAA--------EEPP*Q 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1186 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPPPAP 1240
Query: 266 LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1241 APAPAPSSGGYSGGSSGGSAAGGGGGSSG 1269
Score = 35.8 bits (81), Expect(2) = 0.055
Identities = 31/89 (34%), Positives = 37/89 (40%), Gaps = 11/89 (12%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1289 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPPPAP 1343
Query: 266 LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1344 APAPAPSSGGYSGGSSGGSAAGGGGGSSG 1372
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 31/90 (34%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1489 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYTGGSAAPPPPPPPPPPPPPA 1543
Query: 266 -LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1544 PAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1573
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 31/90 (34%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1237 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYTGGSAAPPPPPPPPPPPPPA 1291
Query: 266 -LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1292 PAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1321
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 31/90 (34%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1437 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYTGGSAAPPPPPPPPPPPPPA 1491
Query: 266 -LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1492 PAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1521
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 31/90 (34%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G SAA PP
Sbjct: 1340 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYTGGSAAPPPPPPPPPPPPPA 1394
Query: 266 -LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1395 PAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1424
Score = 34.7 bits (78), Expect(2) = 0.12
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G+ G+ + GGG+ G G G SAA PP
Sbjct: 930 PPAPAPAPAPSSGGYSGASSGGSAAGGGGGSSG-----GYSGGSAAPPPPPPPPPPPPPP 984
Query: 266 ----LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 985 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1017
Score = 33.9 bits (76), Expect = 1.00
Identities = 30/90 (33%), Positives = 36/90 (39%), Gaps = 12/90 (13%)
Frame = +2
Query: 110 PSARAARWCGGRGGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-------- 265
P A A GG +G G+ + GGG+ G G G S A PP
Sbjct: 1034 PPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSG-----GYSGGSTAPPPPPPPPPPPPPA 1088
Query: 266 -LPAPLQHYGGAAGRRSG---AGRGGAPTG 343
PAP GG +G SG AG GG +G
Sbjct: 1089 PAPAPAPSSGGYSGGSSGGSAAGGGGGSSG 1118
Score = 33.1 bits (74), Expect = 1.7
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Frame = +2
Query: 146 GGTTGSFQRGAHSQQGGGALGVI*RRGADGHSAAEEPP*Q-----LPAPLQHYGGAAGRR 310
GG++G G ++ GGG G G SAA PP PAP GG +G
Sbjct: 757 GGSSG----GGYASGGGGGGGSSGGSGGRYSSAAAPPPPPPPPPPAPAPAPSSGGYSGGS 812
Query: 311 SGAGRGGAPTGAECRHSTC*CFTFRQPAAGGGQGAERRHQCDAAA 445
SG G G+ +S ++GGG G+ + +AA
Sbjct: 813 SGDSAAGGGGGSSRGYS-------EGSSSGGGGGSSGGYSGGSAA 850
Score = 32.0 bits (71), Expect = 3.8
Identities = 26/81 (32%), Positives = 30/81 (36%)
Frame = -3
Query: 348 SAPVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSSAALWPSAPRR*MTPSAPPPC*LWAPR 169
+AP PP P P PA P +G GGS+A + SA PP
Sbjct: 1125 AAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPP------- 1177
Query: 168 *KLPVVPPRPPHQRAARAEGP 106
P PP PP A A P
Sbjct: 1178 ---PPPPPPPPPPAPAPAPAP 1195
Score = 31.2 bits (69), Expect = 6.5
Identities = 28/83 (33%), Positives = 32/83 (37%), Gaps = 2/83 (2%)
Frame = -3
Query: 348 SAPVGAPPRPAPLRLPAAPP*CCSG--AGSC*GGSSAALWPSAPRR*MTPSAPPPC*LWA 175
+AP PP P P PA P SG +G GGS+A + SA PP
Sbjct: 1174 AAPPPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPP----- 1228
Query: 174 PR*KLPVVPPRPPHQRAARAEGP 106
P PP PP A A P
Sbjct: 1229 -----PPPPPPPPPPAPAPAPAP 1246
Score = 30.8 bits (68), Expect = 8.4
Identities = 26/82 (31%), Positives = 30/82 (35%)
Frame = -3
Query: 351 HSAPVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSSAALWPSAPRR*MTPSAPPPC*LWAP 172
+S APP P P PA P +G GGS+A + SA PP
Sbjct: 1426 YSGGSAAPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPP------ 1479
Query: 171 R*KLPVVPPRPPHQRAARAEGP 106
P PP PP A A P
Sbjct: 1480 ---PPPPPPPPPPPAPAPAPAP 1498
Score = 29.3 bits (64), Expect(2) = 0.15
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 178 GASLKAASSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPAAGAAVAGG 11
G S S +S+ GSSG + + A+PP PP P PA A + G
Sbjct: 887 GGSSGGYSGGSSSGGGGGSSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSG 942
Score = 28.1 bits (61), Expect(2) = 1.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 157 SSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPAAGAAVAG 14
SS SA+ G S G +A PP PP P PA + G
Sbjct: 1455 SSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGG 1502
Score = 27.7 bits (60), Expect(2) = 6.6
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 178 GASLKAASSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPAAGAAVAG 14
G S + S +S+ GSSG + + A PP P P P++G G
Sbjct: 822 GGSSRGYSEGSSSGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGG 876
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 12 PPATAAPAAGSGPKPGGSAATTVPGG 89
PP APA SG GGS+ + GG
Sbjct: 795 PPPAPAPAPSSGGYSGGSSGDSAAGG 820
Score = 26.2 bits (56), Expect(2) = 0.15
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 348 SAPVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSSA 244
+AP PP P P PA P +G GGS+A
Sbjct: 849 AAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 883
Score = 25.8 bits (55), Expect(2) = 4e-05
Identities = 14/27 (51%), Positives = 16/27 (58%), Gaps = 1/27 (3%)
Frame = +3
Query: 12 PPATA-APAAGSGPKPGGSAATTVPGG 89
PPA A APA SG GGS+ + GG
Sbjct: 859 PPAPAPAPAPSSGGYSGGSSGGSAAGG 885
Score = 24.6 bits (52), Expect(2) = 8.4
Identities = 17/60 (28%), Positives = 21/60 (34%), Gaps = 10/60 (16%)
Frame = -2
Query: 160 ASSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPA----------AGAAVAGG 11
+SS + G SG A PP PP P PA +G + AGG
Sbjct: 897 SSSGGGGGSSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGASSGGSAAGG 956
Score = 24.6 bits (52), Expect(2) = 8.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 351 HSAPVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSS 247
+S APP P P PA P +G GGSS
Sbjct: 844 YSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSS 878
Score = 24.3 bits (51), Expect(2) = 1.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 342 PVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSSA 244
P PP P P PA P +G GGS+A
Sbjct: 1384 PPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAA 1416
Score = 23.1 bits (48), Expect(2) = 0.006
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 12 PPATAAPAAGSGPKPGGSAATTVPGGTA 95
PP APA P GG + + G A
Sbjct: 927 PPPPPAPAPAPAPSSGGYSGASSGGSAA 954
Score = 22.3 bits (46), Expect(2) = 0.006
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 12 PPATAAPAAGSGPKPGGSAATTVPGGTA 95
PP APA P GG + + G A
Sbjct: 1337 PPPPPAPAPAPAPSSGGYSGGSSGGSAA 1364
Score = 21.9 bits (45), Expect(2) = 6.6
Identities = 14/34 (41%), Positives = 15/34 (43%)
Frame = -3
Query: 348 SAPVGAPPRPAPLRLPAAPP*CCSGAGSC*GGSS 247
SA PP P P PA P +G GGSS
Sbjct: 784 SAAAPPPPPPPPPPAPAPAP----SSGGYSGGSS 813
Score = 21.2 bits (43), Expect(2) = 0.092
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1480 PPPPPPPPPPPAPA 1493
Score = 21.2 bits (43), Expect(2) = 0.092
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1228 PPPPPPPPPPPAPA 1241
Score = 21.2 bits (43), Expect(2) = 0.092
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1383 PPPPPPPPPPPAPA 1396
Score = 21.2 bits (43), Expect(2) = 0.033
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1077 PPPPPPPPPPPAPA 1090
Score = 21.2 bits (43), Expect(2) = 0.092
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1331 PPPPPPPPPPPAPA 1344
Score = 21.2 bits (43), Expect(2) = 0.055
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1177 PPPPPPPPPPPAPA 1190
Score = 21.2 bits (43), Expect(2) = 0.055
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 1280 PPPPPPPPPPPAPA 1293
Score = 21.2 bits (43), Expect(2) = 0.12
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 1 PPAPRPPQRPLRPA 42
PP P PP P PA
Sbjct: 921 PPPPPPPPPPPAPA 934
>gb|AAK30591.1|AF350262_1 major ampullate spidroin 1 [Argiope aurantia]
Length = 447
Score = 44.3 bits (103), Expect = 7e-04
Identities = 44/136 (32%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = +2
Query: 62 LGSDNSARGDSCRCLGPSARAARWCGGRGGTTGSFQRGA-HSQQGGGALGVI*RRGADGH 238
LGS + +G + R +A AA GGRGG G +GA G G G A
Sbjct: 149 LGSQGAGQGGAGRGAAAAAAAAGGQGGRGGYGGLGSQGAGQGGYGAGQGGAGAAAAAAAA 208
Query: 239 SAAEEPP*QLPAPLQHYGGAAGRRSGAGRGGAPTGAECRHSTC*CFTF-RQPAAGGGQGA 415
A E Q YG G + GAG+GGA A + + G GQG
Sbjct: 209 GGAGEGGLGAGGAGQGYGSGLGGQGGAGQGGAAAAAAAAGGQGGHGGYGGLGSQGAGQGG 268
Query: 416 ERRHQCDAAAVAGCPG 463
R AAA AG G
Sbjct: 269 AGRGAAAAAAAAGGQG 284
Score = 37.7 bits (86), Expect = 0.069
Identities = 36/123 (29%), Positives = 47/123 (37%), Gaps = 4/123 (3%)
Frame = +2
Query: 62 LGSDNSARGDSCRCLGPSARAARWCGGRGGTTGSFQRGA----HSQQGGGALGVI*RRGA 229
LGS + +G + R +A AA GG+GG G +GA + GGA A
Sbjct: 259 LGSQGAGQGGAGRGAAAAAAAAGGQGGQGGYGGLGSQGAGQGGYGAGQGGAAAAAAAAAA 318
Query: 230 DGHSAAEEPP*QLPAPLQHYGGAAGRRSGAGRGGAPTGAECRHSTC*CFTFRQPAAGGGQ 409
G A Q YG G + GAG+ GA + A A GGQ
Sbjct: 319 GGAGGAGRGELGAGGAGQGYGXGLGGQGGAGQRGAASVA---------------ALAGGQ 363
Query: 410 GAE 418
G +
Sbjct: 364 GGQ 366
Score = 37.4 bits (85), Expect = 0.090
Identities = 42/142 (29%), Positives = 50/142 (34%), Gaps = 8/142 (5%)
Frame = +2
Query: 62 LGSDNSARGDSCRCLGPSARAARWCGGRGGTTG-------SFQRGAHSQQGGGALGVI*R 220
LG A G G +A AA GG+GG G +G + GGA
Sbjct: 39 LGGQGGAGG------GAAAAAAAAAGGQGGQGGYGGLGSQGAGQGGYGAGQGGAGAAAAA 92
Query: 221 RGADGHSAAEEPP*QLPAPLQHYGGAAGRRSGAGRGGAPTGAECRHSTC*CFTF-RQPAA 397
A G A Q YG G + GAG+GGA A + +
Sbjct: 93 AAAGGAGGAGRGGLGAGGAGQGYGSGLGGQGGAGQGGAAAAAAAAGGQGGQGGYGGLGSQ 152
Query: 398 GGGQGAERRHQCDAAAVAGCPG 463
G GQG R AAA AG G
Sbjct: 153 GAGQGGAGRGAAAAAAAAGGQG 174
>ref|ZP_00044668.1| COG2274: ABC-type bacteriocin/lantibiotic exporters, contain an
N-terminal double-glycine peptidase domain
[Magnetococcus sp. MC-1]
Length = 886
Score = 44.3 bits (103), Expect = 7e-04
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 12 PPATAAPAAGSGPKPGGSAATTVPGGTAVAASAPLP-ELPAGVEAEAALLAAFSEAPTVS 188
PPA A A P G AA P G AA AP LPAG + A + P S
Sbjct: 602 PPAGAGAPAAGAPAAGAPAAGAPPAGAPPAAGAPAAGALPAGAKPPATA----TPVPPDS 657
Query: 189 KAVVRSASSSGV---VLTATVQQRNLPNNS 269
K +A+S+GV V + QQR+ P++S
Sbjct: 658 KPPAATAASTGVPSTVPASATQQRSAPSSS 687
Score = 35.4 bits (80), Expect = 0.34
Identities = 27/76 (35%), Positives = 32/76 (41%)
Frame = -2
Query: 241 TVAVSTTPLDDAERTTALLTVGASLKAASSAASASTPAGSSGRGAEAATAVPPGTVVAAE 62
T+A P DA L GA K + A+ + PAG+ GA A A P G A
Sbjct: 554 TLAPPPPPRADAPPAAGALPAGA--KPPAPPAAGAPPAGAPPAGAPPAGAPPAGAGAPAA 611
Query: 61 PPGFGPLPAAGAAVAG 14
PAAGA AG
Sbjct: 612 GAPAAGAPAAGAPPAG 627
Score = 35.4 bits (80), Expect = 0.34
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -2
Query: 211 DAERTTALLTVGASLKAASSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPAA 32
D ++ T L +A + A+ + PAG+ AA A P G A PP P A
Sbjct: 547 DLKKGTLTLAPPPPPRADAPPAAGALPAGAKPPAPPAAGAPPAGAPPAGAPPAGAPPAGA 606
Query: 31 GAAVAG 14
GA AG
Sbjct: 607 GAPAAG 612
Score = 33.5 bits (75), Expect = 1.3
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 178 GASLKAASSAASASTPAGSSGRGAEAATAVPPGTVVAAEPPGFGPLPA 35
GA A A + + AG+ GA AA A P G AA P G LPA
Sbjct: 595 GAPPAGAPPAGAGAPAAGAPAAGAPAAGAPPAGAPPAAGAPAAGALPA 642
Score = 31.6 bits (70), Expect = 4.9
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +3
Query: 12 PPATAAPAAGSGPKPGGSAATTVPGGTAVAASAPLPELPAGVEAEAA 152
PPA A AG+ P P AA P G A + P PAG A AA
Sbjct: 566 PPAAGALPAGAKP-PAPPAAGAPPAGAPPAGAPPAGAPPAGAGAPAA 611
>ref|ZP_00010929.1| COG0811: Biopolymer transport proteins [Rhodopseudomonas palustris]
Length = 675
Score = 43.5 bits (101), Expect = 0.001
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +3
Query: 6 STPPATAAPAAGSGPKPGGSAATTVPGGTAVAASAPLPELPAGVEA------EAALLAAF 167
S P TA+PAA P P GS+ P G A AA AP+ PA + E + A
Sbjct: 332 SNPAPTASPAASQAPLPDGSSPQGAPTGDAPAADAPVAAAPAAMAGFAGDIDELEISKAS 391
Query: 168 SEAPTVSKAVVRSASSSGVVLTATVQQ 248
A V A + G +LT T+ +
Sbjct: 392 RPAGFVRVAALGQGLDKGKLLTFTIDE 418
EST assemble image
|
|
|
|
|
|
clone |
accession |
position |
| 1 |
MXL040g01_r |
BP095367 |
1 |
476 |
| 2 |
LCL013h09_r |
AV626700 |
64 |
248 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute