KCC003100A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003100A_C01 KCC003100A_c01
gagagcacaagtataCTTCTGTGGCACGTTGCCAGAGGTGCTCTAAAGTTACTTGTTTTG
GGGCGACAGCTTTCTGCTCTGAAGACTGCAGGCCTATCCACATCGCACATATACGTTACT
GTTTGTCAACAGCAGCATAATTAAACGCTTGTGCGCTCGGGGTTGAGGAACTCGGCCGCT
TCGTGACAGTCGACGCGGAGCTGCGCAAATGGCCGAACCAAAGCCTGGACCTGGGCCTGG
CGAGGGCAATGATGGAGTCAACGTGAATGTGTTGCTTCGCTGCAGGCCTCTGAGCGACAA
GGAAATCGCTGAGAGGACCCCGCAAGTTATTTCCTGCAATGAGGCTCTGCGCGAGGCGAC
CCTCTATATCCAGAGCGTCGGCGGAAAACAGACGTCCAAGACGTTCCGCTTTGACAGGGT
CTTCAGCCCCGAGTCCTCTCAGGAGAAGCTGTTTAAGCAGGCCATCGTGCCCATCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003100A_C01 KCC003100A_c01
         (477 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_181162.1| kinesin-related protein [Arabidopsis thaliana] ...    81  5e-15
gb|AAK91815.1|AF272752_1 kinesin heavy chain [Zea mays]                80  9e-15
gb|AAK91818.1|AF272755_1 kinesin heavy chain [Zea mays]                80  9e-15
gb|AAK91129.1| KRP120-2 [Daucus carota]                                80  1e-14
ref|NP_190171.1| kinesin-related protein [Arabidopsis thaliana] ...    79  2e-14

>ref|NP_181162.1| kinesin-related protein [Arabidopsis thaliana]
           gi|11132972|sp|P82266|K125_ARATH Probable 125 kDa
           kinesin-related protein gi|25295721|pir||H84777 probable
           kinesin-related cytokinesis protein [imported] -
           Arabidopsis thaliana gi|4510356|gb|AAD21445.1| putative
           kinesin-related cytokinesis protein [Arabidopsis
           thaliana]
          Length = 1056

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = +2

Query: 254 GVNVNVLLRCRPLSDKEIAERTPQVISCNEALREATLYIQSVGGKQTSKTFRFDRVFSPE 433
           GVNV VLLRCRP SD E+    PQV++CN+  RE  +  Q++ GK   + F FD+VF P 
Sbjct: 10  GVNVQVLLRCRPFSDDELRSNAPQVLTCNDLQREVAV-SQNIAGKHIDRVFTFDKVFGPS 68

Query: 434 SSQEKLFKQAIVPI 475
           + Q+ L+ QA+VPI
Sbjct: 69  AQQKDLYDQAVVPI 82

>gb|AAK91815.1|AF272752_1 kinesin heavy chain [Zea mays]
          Length = 992

 Score = 80.5 bits (197), Expect = 9e-15
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = +2

Query: 257 VNVNVLLRCRPLSDKEIAERTPQVISCNEALREATLYIQSVGGKQTSKTFRFDRVFSPES 436
           VNV VLLRCRP SD E+    PQVI+CN+  RE  +  Q++ GKQ  + + FD+VF P +
Sbjct: 51  VNVQVLLRCRPFSDDELRNNAPQVITCNDYQREVAV-TQNIAGKQFDRVYAFDKVFGPTA 109

Query: 437 SQEKLFKQAIVPI 475
            Q++L+ QAI+PI
Sbjct: 110 KQKELYDQAIIPI 122

>gb|AAK91818.1|AF272755_1 kinesin heavy chain [Zea mays]
          Length = 1079

 Score = 80.5 bits (197), Expect = 9e-15
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = +2

Query: 257 VNVNVLLRCRPLSDKEIAERTPQVISCNEALREATLYIQSVGGKQTSKTFRFDRVFSPES 436
           VNV VLLRCRP SD E+    PQVI+CN+  RE  +  Q++ GKQ  + + FD+VF P +
Sbjct: 54  VNVQVLLRCRPFSDDELRNNAPQVITCNDYQREVAV-TQNIAGKQFDRVYAFDKVFGPTA 112

Query: 437 SQEKLFKQAIVPI 475
            Q++L+ QAI+PI
Sbjct: 113 KQKELYDQAIIPI 125

>gb|AAK91129.1| KRP120-2 [Daucus carota]
          Length = 1045

 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 38/77 (49%), Positives = 52/77 (67%)
 Frame = +2

Query: 245 GNDGVNVNVLLRCRPLSDKEIAERTPQVISCNEALREATLYIQSVGGKQTSKTFRFDRVF 424
           G  GVNV V++RCRPLS+ EI   TP VI+C E  RE    +Q++  KQ  ++F FD+VF
Sbjct: 47  GEKGVNVQVIVRCRPLSEDEIKAHTPVVITCTENRREVCA-VQNIASKQIDRSFMFDKVF 105

Query: 425 SPESSQEKLFKQAIVPI 475
            P S Q+ L++QA+ PI
Sbjct: 106 GPASQQKDLYEQAVSPI 122

>ref|NP_190171.1| kinesin-related protein [Arabidopsis thaliana]
           gi|11276945|pir||T47525 kinesin-related protein-like -
           Arabidopsis thaliana gi|7339486|emb|CAB82809.1|
           kinesin-related protein-like [Arabidopsis thaliana]
          Length = 1058

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 41/74 (55%), Positives = 48/74 (64%)
 Frame = +2

Query: 254 GVNVNVLLRCRPLSDKEIAERTPQVISCNEALREATLYIQSVGGKQTSKTFRFDRVFSPE 433
           GVNV V+LRCRPLS+ E    TP VISCNE  RE     QS+ GK   + F FD+VF P 
Sbjct: 46  GVNVQVILRCRPLSEDEARIHTPVVISCNENRREVAA-TQSIAGKHIDRHFAFDKVFGPA 104

Query: 434 SSQEKLFKQAIVPI 475
           S Q+ L+ QAI PI
Sbjct: 105 SQQKDLYDQAICPI 118



EST assemble image


clone accession position
1 LCL013a01_r AV626649 1 477
2 MXL035e06_r BP095083 16 148
3 MXL094b12_r BP098493 33 393




Chlamydomonas reinhardtii
Kazusa DNA Research Institute