KCC003096A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003096A_C01 KCC003096A_c01
gTGACTTCCAACGCGACAGTCAACCACTTGCTGCACCTAGGTAGTTGCTTTCCGTCGTCC
ACCACTGCTCAAGAGCCACCGAGCAAAAATGCTGCGCCCTGACGCTTCCCGCAAGAAGGA
GTACAAGAAGGGTATTGATGCGGAGGAGGCTCGCCGCAAGCGTGAGGACAACATTATCGC
ACTGCGTCAGAACAAGCGCGATGAGAATCTGCAGAAGAAGCGCTCGACCTTCGCCCCGGC
CTCGGCCAACGCCAACTTCGGCATCGAGGACAGCACCAAGCATGCTGTTGGCCGCCAACA
GCTGGATGAGCTGCCCATGATGGTACACGGTGTGTTTAACGGCACCGTGGAGCAGCAGTA
TGACTGCACGCAGCGCTTCAGGAAGCTGCTGTCCATCGAGCGCAACCCTCCCATTGAGGA
GGTGATCAAGACGGGCGTCATCCCCAAGTTTGTGGAGTTCCTCCAGCGCCACGACACTCC
GCAGCTGCAGTTTGAGGCTGCGTGGGCGCTCACCAACGTCGCGTCGGGCACCTCGGAGCA
CACGAAGGTGGTTATCGACCACAACGCGGTGCCCATTTTTGTTCAGCTGCTGGCCTCGCC
CAACGATGACGTGCGCGAGCAGGCGGTGTGGGCTCTGGGTAACATCGCCGGTGACTCGCC
GAAGTGCCGCGACTATGTGCTGGGCCACAACGCGCTGCCGCCGCTGCTGGAGCAGCTGAA
GGAGAACAGCAAGATTTCCATGCTGCGCAACGCCACCTGGACCCTGTCCAACTTCTGCCG
CGGCAAGCCCGCGCCCAACTTCATTGTGACCCGCCAGGCGCTGCCCACGCTGGCCCGCCT
GATCCACCACAGCGACGAGGAGGTGCTGACGGACGCGTGCTGGGCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003096A_C01 KCC003096A_c01
         (887 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T52098 probable nuclear transport factor importin alpha [im...   340  2e-92
gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arabidopsis thalian...   340  2e-92
ref|NP_567485.1| expressed protein [Arabidopsis thaliana]             340  2e-92
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           339  3e-92
dbj|BAA31165.1| NLS receptor [Oryza sativa] gi|3273245|dbj|BAA31...   336  4e-91

>pir||T52098 probable nuclear transport factor importin alpha [imported] -
           Arabidopsis thaliana gi|2950210|emb|CAA74965.1| Importin
           alpha-like protein [Arabidopsis thaliana]
          Length = 535

 Score =  340 bits (872), Expect = 2e-92
 Identities = 172/268 (64%), Positives = 205/268 (76%), Gaps = 3/268 (1%)
 Frame = +2

Query: 92  LRPDAS---RKKEYKKGIDAEEARRKREDNIIALRQNKRDENLQKKRSTFAPASANANFG 262
           LRP+A    R+  YK  +DAEE RR+REDN++ +R++KR+E+LQKKR     A+    F 
Sbjct: 3   LRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQFA 62

Query: 263 IEDSTKHAVGRQQLDELPMMVHGVFNGTVEQQYDCTQRFRKLLSIERNPPIEEVIKTGVI 442
                  +   ++L+ LP MV GV++     Q + T +FRKLLSIER+PPIEEVI  GV+
Sbjct: 63  PSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVV 122

Query: 443 PKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVREQ 622
           P+FVEFL R D PQLQFEAAWALTN+ASGTSE+TKVVI+H AVPIFVQLLAS +DDVREQ
Sbjct: 123 PRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQ 182

Query: 623 AVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRGKPAPNF 802
           AVWALGN+AGDSP+CRD VLG  AL PLL QL E++K+SMLRNATWTLSNFCRGKP P F
Sbjct: 183 AVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPF 242

Query: 803 IVTRQALPTLARLIHHSDEEVLTDACWA 886
              R ALP L RLIH +DEEVLTDACWA
Sbjct: 243 DQVRPALPALERLIHSTDEEVLTDACWA 270

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 45/162 (27%), Positives = 79/162 (47%), Gaps = 2/162 (1%)
 Frame = +2

Query: 407 PPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQ 586
           PP ++V     +P     +   D   L  +A WAL+ ++ GT++  + VI+   VP  V+
Sbjct: 240 PPFDQV--RPALPALERLIHSTDEEVLT-DACWALSYLSDGTNDKVQSVIEAGVVPRLVE 296

Query: 587 LLASPNDDVREQAVWALGN-IAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWT 763
           LL   +  V   A+ ++GN + GD  + +  V+   A P LL  L  N K S+ + A WT
Sbjct: 297 LLQHQSPSVLIPALRSIGNNVTGDDLQTQ-CVIKSCAPPSLLGLLTHNHKKSIKKEACWT 355

Query: 764 LSNFCRG-KPAPNFIVTRQALPTLARLIHHSDEEVLTDACWA 886
           +SN   G +     +     +  L  L+ +++ ++  +A WA
Sbjct: 356 ISNITAGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWA 397

 Score = 59.3 bits (142), Expect = 8e-08
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
 Frame = +2

Query: 389 LSIERNPPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNA 568
           LS   N  ++ VI+ GV+P+ VE LQ H +P +   A  ++ N  +G    T+ VI   A
Sbjct: 274 LSDGTNDKVQSVIEAGVVPRLVELLQ-HQSPSVLIPALRSIGNNVTGDDLQTQCVIKSCA 332

Query: 569 VPIFVQLLA-SPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISML 745
            P  + LL  +    ++++A W + NI   +      V     + PL+  L +N++  + 
Sbjct: 333 PPSLLGLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICPLVNLL-QNAEFDIK 391

Query: 746 RNATWTLSNFCRGKPAP--NFIVTRQALPTLARLIHHSDEEVLT 871
           + A W +SN   G       ++V +  +  L  L+   D  ++T
Sbjct: 392 KEAAWAISNATSGGSPDQIKYMVEQGVVKPLCDLLVCPDPRIIT 435

>gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arabidopsis thaliana]
           gi|16974501|gb|AAL31160.1| AT3g06720/F3E22_14
           [Arabidopsis thaliana]
          Length = 535

 Score =  340 bits (872), Expect = 2e-92
 Identities = 172/268 (64%), Positives = 205/268 (76%), Gaps = 3/268 (1%)
 Frame = +2

Query: 92  LRPDAS---RKKEYKKGIDAEEARRKREDNIIALRQNKRDENLQKKRSTFAPASANANFG 262
           LRP+A    R+  YK  +DAEE RR+REDN++ +R++KR+E+LQKKR     A+    F 
Sbjct: 3   LRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQFA 62

Query: 263 IEDSTKHAVGRQQLDELPMMVHGVFNGTVEQQYDCTQRFRKLLSIERNPPIEEVIKTGVI 442
                  +   ++L+ LP MV GV++     Q + T +FRKLLSIER+PPIEEVI  GV+
Sbjct: 63  PSSVPASSTVEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVV 122

Query: 443 PKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVREQ 622
           P+FVEFL R D PQLQFEAAWALTN+ASGTSE+TKVVI+H AVPIFVQLLAS +DDVREQ
Sbjct: 123 PRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQ 182

Query: 623 AVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRGKPAPNF 802
           AVWALGN+AGDSP+CRD VLG  AL PLL QL E++K+SMLRNATWTLSNFCRGKP P F
Sbjct: 183 AVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPF 242

Query: 803 IVTRQALPTLARLIHHSDEEVLTDACWA 886
              R ALP L RLIH +DEEVLTDACWA
Sbjct: 243 DQVRPALPALERLIHSTDEEVLTDACWA 270

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 45/161 (27%), Positives = 76/161 (46%), Gaps = 1/161 (0%)
 Frame = +2

Query: 407 PPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQ 586
           PP ++V     +P     +   D   L  +A WAL+ ++ GT++  + VI+   VP  V+
Sbjct: 240 PPFDQV--RPALPALERLIHSTDEEVLT-DACWALSYLSDGTNDKIQSVIEAGVVPRLVE 296

Query: 587 LLASPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTL 766
           LL   +  V   A+ ++GNI          V+ H AL  LL  L  N K S+ + A WT+
Sbjct: 297 LLQHQSPSVLIPALRSIGNIVTGDDLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTI 356

Query: 767 SNFCRG-KPAPNFIVTRQALPTLARLIHHSDEEVLTDACWA 886
           SN   G +     +     +  L  L+ +++ ++  +A WA
Sbjct: 357 SNITAGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWA 397

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 44/164 (26%), Positives = 79/164 (47%), Gaps = 3/164 (1%)
 Frame = +2

Query: 389 LSIERNPPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNA 568
           LS   N  I+ VI+ GV+P+ VE LQ H +P +   A  ++ N+ +G    T+ VI H A
Sbjct: 274 LSDGTNDKIQSVIEAGVVPRLVELLQ-HQSPSVLIPALRSIGNIVTGDDLQTQCVISHGA 332

Query: 569 VPIFVQLLA-SPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISML 745
           +   + LL  +    ++++A W + NI   +      V     + PL+  L +N++  + 
Sbjct: 333 LLSLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICPLVNLL-QNAEFDIK 391

Query: 746 RNATWTLSNFCRGKPAP--NFIVTRQALPTLARLIHHSDEEVLT 871
           + A W +SN   G       ++V +  +  L  L+   D  ++T
Sbjct: 392 KEAAWAISNATSGGSPDQIKYMVEQGVVKPLCDLLVCPDPRIIT 435

 Score = 37.4 bits (85), Expect = 0.34
 Identities = 31/116 (26%), Positives = 53/116 (44%), Gaps = 3/116 (2%)
 Frame = +2

Query: 413 IEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTS-EHTKVVIDHNAVPIFVQL 589
           I+ V + G+I   V  LQ  +   ++ EAAWA++N  SG S +  K +++   V     L
Sbjct: 367 IQAVCEAGLICPLVNLLQNAEF-DIKKEAAWAISNATSGGSPDQIKYMVEQGVVKPLCDL 425

Query: 590 LASPNDDVREQAVWALGNI--AGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRN 751
           L  P+  +    +  L NI   G++ K        N    L++  +   KI  L++
Sbjct: 426 LVCPDPRIITVCLEGLENILKVGEAEKVTGNTGDVNFYAQLIDDAEGLEKIENLQS 481

>ref|NP_567485.1| expressed protein [Arabidopsis thaliana]
          Length = 444

 Score =  340 bits (871), Expect = 2e-92
 Identities = 173/268 (64%), Positives = 206/268 (76%), Gaps = 3/268 (1%)
 Frame = +2

Query: 92  LRPDAS---RKKEYKKGIDAEEARRKREDNIIALRQNKRDENLQKKRSTFAPASANANFG 262
           LRP+A    R+  YK  +DAEE RR+REDN++ +R++KR+E+LQKKR     A+    F 
Sbjct: 3   LRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQFA 62

Query: 263 IEDSTKHAVGRQQLDELPMMVHGVFNGTVEQQYDCTQRFRKLLSIERNPPIEEVIKTGVI 442
                 H +  ++L+ LP MV GV++     Q + T +FRKLLSIER+PPIEEVI  GV+
Sbjct: 63  PLLFLLHQLLEKKLESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVV 122

Query: 443 PKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVREQ 622
           P+FVEFL R D PQLQFEAAWALTN+ASGTSE+TKVVI+H AVPIFVQLLAS +DDVREQ
Sbjct: 123 PRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQ 182

Query: 623 AVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRGKPAPNF 802
           AVWALGN+AGDSP+CRD VLG  AL PLL QL E++K+SMLRNATWTLSNFCRGKP P F
Sbjct: 183 AVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPF 242

Query: 803 IVTRQALPTLARLIHHSDEEVLTDACWA 886
              R ALP L RLIH +DEEVLTDACWA
Sbjct: 243 DQVRPALPALERLIHSTDEEVLTDACWA 270

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 45/161 (27%), Positives = 76/161 (46%), Gaps = 1/161 (0%)
 Frame = +2

Query: 407 PPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQ 586
           PP ++V     +P     +   D   L  +A WAL+ ++ GT++  + VI+   VP  V+
Sbjct: 240 PPFDQV--RPALPALERLIHSTDEEVLT-DACWALSYLSDGTNDKIQSVIEAGVVPRLVE 296

Query: 587 LLASPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTL 766
           LL   +  V   A+ ++GNI          V+ H AL  LL  L  N K S+ + A WT+
Sbjct: 297 LLQHQSPSVLIPALRSIGNIVTGDDLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTI 356

Query: 767 SNFCRG-KPAPNFIVTRQALPTLARLIHHSDEEVLTDACWA 886
           SN   G +     +     +  L  L+ +++ ++  +A WA
Sbjct: 357 SNITAGNRDQIQAVCEAGLICPLVNLLQNAEFDIKKEAAWA 397

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
 Frame = +2

Query: 389 LSIERNPPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNA 568
           LS   N  I+ VI+ GV+P+ VE LQ H +P +   A  ++ N+ +G    T+ VI H A
Sbjct: 274 LSDGTNDKIQSVIEAGVVPRLVELLQ-HQSPSVLIPALRSIGNIVTGDDLQTQCVISHGA 332

Query: 569 VPIFVQLLA-SPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISML 745
           +   + LL  +    ++++A W + NI   +      V     + PL+  L +N++  + 
Sbjct: 333 LLSLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICPLVNLL-QNAEFDIK 391

Query: 746 RNATWTLSNFCRG 784
           + A W +SN   G
Sbjct: 392 KEAAWAISNATSG 404

>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  339 bits (870), Expect = 3e-92
 Identities = 173/268 (64%), Positives = 204/268 (75%), Gaps = 3/268 (1%)
 Frame = +2

Query: 92  LRPDAS---RKKEYKKGIDAEEARRKREDNIIALRQNKRDENLQKKRSTFAPASANANFG 262
           LRP      RKK YK G+DA+EARR+REDN++ +R+NKR++NL KKR       +     
Sbjct: 3   LRPSTRTEVRKKAYKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLFHSQQQLP 62

Query: 263 IEDSTKHAVGRQQLDELPMMVHGVFNGTVEQQYDCTQRFRKLLSIERNPPIEEVIKTGVI 442
               T  A+  ++L+ +P+MV GV++     Q + T  FRKLLSIER+PPI+EVIK GVI
Sbjct: 63  DAAQTPDAI-EKRLESIPVMVQGVWSEDPAAQIEATTHFRKLLSIERSPPIDEVIKAGVI 121

Query: 443 PKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVREQ 622
           P+FVEFL RHD PQLQFEAAWALTNVASGTSEHT+VVIDH AVP+FVQLL+S +DDVREQ
Sbjct: 122 PRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSASDDVREQ 181

Query: 623 AVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRGKPAPNF 802
           AVWALGN+AGDSP CRD VL   AL PLL QL E+SK+SMLRNATWTLSNFCRGKP   F
Sbjct: 182 AVWALGNVAGDSPSCRDLVLSQGALMPLLSQLNEHSKLSMLRNATWTLSNFCRGKPPTPF 241

Query: 803 IVTRQALPTLARLIHHSDEEVLTDACWA 886
              + ALP L +LIH SDEEVLTDACWA
Sbjct: 242 EAVKPALPVLQQLIHMSDEEVLTDACWA 269

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
 Frame = +2

Query: 407 PPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQ 586
           PP         +P   + +   D   L  +A WAL+ ++ G ++  + VID    P  V+
Sbjct: 237 PPTPFEAVKPALPVLQQLIHMSDEEVLT-DACWALSYLSDGPNDKIQAVIDAGVCPRLVE 295

Query: 587 LLASPNDDVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTL 766
           LL  P+  V   A+   GNI         YV+ +  LP L + L +N K S+ + A WT+
Sbjct: 296 LLLHPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRVLPCLYQLLTQNHKKSIKKEACWTI 355

Query: 767 SNFCRGKPAP-NFIVTRQALPTLARLIHHSDEEVLTDACWA 886
           SN   G  A    ++    +  L  L+ +++ ++  +A WA
Sbjct: 356 SNITAGNRAQIQAVIEANIILPLVHLLQNAEFDIKKEAAWA 396

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
 Frame = +2

Query: 389 LSIERNPPIEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNA 568
           LS   N  I+ VI  GV P+ VE L  H +P +   A     N+ +G    T+ VID+  
Sbjct: 273 LSDGPNDKIQAVIDAGVCPRLVELLL-HPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRV 331

Query: 569 VPIFVQLLASPND-DVREQAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISML 745
           +P   QLL   +   ++++A W + NI   +      V+  N + PL+  L +N++  + 
Sbjct: 332 LPCLYQLLTQNHKKSIKKEACWTISNITAGNRAQIQAVIEANIILPLVHLL-QNAEFDIK 390

Query: 746 RNATWTLSNFCRG--KPAPNFIVTRQALPTLARLIHHSDEEVLT 871
           + A W +SN   G       F+ ++  +  L  L+   D  ++T
Sbjct: 391 KEAAWAISNATSGGSNEQIRFLASQGCIKPLCDLLICPDPRIVT 434

>dbj|BAA31165.1| NLS receptor [Oryza sativa] gi|3273245|dbj|BAA31166.1| NLS receptor
           [Oryza sativa (japonica cultivar-group)]
           gi|6498466|dbj|BAA87855.1| unnamed protein product
           [Oryza sativa (japonica cultivar-group)]
          Length = 526

 Score =  336 bits (861), Expect = 4e-91
 Identities = 168/263 (63%), Positives = 207/263 (77%), Gaps = 4/263 (1%)
 Frame = +2

Query: 110 RKKEYKKGIDAEEARRKREDNIIALRQNKRDENLQKKR----STFAPASANANFGIEDST 277
           R+  YK  +DAEE RR+REDN++ +R+++R+E+L KKR       AP  A+A  G++   
Sbjct: 12  RRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATGVD--- 68

Query: 278 KHAVGRQQLDELPMMVHGVFNGTVEQQYDCTQRFRKLLSIERNPPIEEVIKTGVIPKFVE 457
                 ++L+ LP M+ GV++     Q + T +FRKLLSIER+PPIEEVI++GV+P+FV+
Sbjct: 69  ------KKLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQ 122

Query: 458 FLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVREQAVWAL 637
           FL R D PQLQFEAAWALTN+ASGTSE+TKVVIDH AVPIFV+LL S +DDVREQAVWAL
Sbjct: 123 FLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWAL 182

Query: 638 GNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRGKPAPNFIVTRQ 817
           GN+AGDSPKCRD VL + AL PLL QL E++K+SMLRNATWTLSNFCRGKP P+F  TR 
Sbjct: 183 GNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRP 242

Query: 818 ALPTLARLIHHSDEEVLTDACWA 886
           ALP LARLIH +DEEVLTDACWA
Sbjct: 243 ALPALARLIHSNDEEVLTDACWA 265

 Score = 72.8 bits (177), Expect = 7e-12
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
 Frame = +2

Query: 440 IPKFVEFLQRHDTPQLQFEAAWALTNVASGTSEHTKVVIDHNAVPIFVQLLASPNDDVRE 619
           +P     +  +D   L  +A WAL+ ++ GT++  + VI+    P  V+LL  P+  V  
Sbjct: 244 LPALARLIHSNDEEVLT-DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLI 302

Query: 620 QAVWALGNIAGDSPKCRDYVLGHNALPPLLEQLKENSKISMLRNATWTLSNFCRG-KPAP 796
            A+  +GNI          ++ H ALP LL  L +N K S+ + A WT+SN   G K   
Sbjct: 303 PALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQI 362

Query: 797 NFIVTRQALPTLARLIHHSDEEVLTDACWA 886
             ++    +  L  L+  ++ ++  +A WA
Sbjct: 363 QAVINAGIIGPLVNLLQTAEFDIKKEAAWA 392

 Score = 36.2 bits (82), Expect = 0.75
 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
 Frame = +2

Query: 413 IEEVIKTGVIPKFVEFLQRHDTPQLQFEAAWALTNVASGTS-EHTKVVIDHNAVPIFVQL 589
           I+ VI  G+I   V  LQ  +   ++ EAAWA++N  SG S +  K ++    +     L
Sbjct: 362 IQAVINAGIIGPLVNLLQTAEF-DIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDL 420

Query: 590 LASPNDDVREQAVWALGNIAGDSPKCRDYVLGH-NALPPLLEQLKENSKISMLRN 751
           L  P+  +    +  L NI       +    G  N    ++++ +   KI  L++
Sbjct: 421 LICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQS 475



EST assemble image


clone accession position
1 LCL012f05_r AV626631 1 534
2 LCL025g11_r AV627374 2 408
3 LCL020b10_r AV627038 5 417
4 LCL095a12_r AV631499 6 421
5 LCL095g03_r AV631529 22 519
6 MXL002c03_r BP093019 435 887




Chlamydomonas reinhardtii
Kazusa DNA Research Institute