Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003095A_C01 KCC003095A_c01
(600 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF72517.2|AF246689_1 ABC transporter mdrA1 [Dictyostelium di... 86 3e-16
emb|CAD59573.1| PDR-like ABC transporter [Oryza sativa (japonica... 86 5e-16
emb|CAD59570.1| PDR-like ABC transporter [Oryza sativa (japonica... 84 1e-15
gb|AAL91491.1|AF482385_1 ABC transporter AbcG6 [Dictyostelium di... 82 6e-15
gb|AAL91500.1|AF482393_1 ABC transporter AbcG15 [Dictyostelium d... 82 8e-15
>gb|AAF72517.2|AF246689_1 ABC transporter mdrA1 [Dictyostelium discoideum]
gi|19550690|gb|AAL91486.1|AF482381_1 ABC transporter
AbcG2 [Dictyostelium discoideum]
gi|28850301|gb|AAM45335.2| similar to Dictyostelium
discoideum (Slime mold). ABC transporter mdrA2
Length = 1328
Score = 86.3 bits (212), Expect = 3e-16
Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +1
Query: 238 KAQNYVREKSFAPQGMRIIFKDLDYHVPSNTQ-KGVRAYLLKKVSGFFEAHQMAALMGPS 414
K V+ + P G + +KDL Y V K R LL +++G+ + + ALMGPS
Sbjct: 698 KENRMVKAQKEIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNEINGYVKPGMLLALMGPS 757
Query: 415 GSGKTTLLDVLAGRKTEGKTEGTIAFAGQKPTPQFLRRYTGYVEQFDTLLGSLSVYEMLL 594
G+GK+TLLDVLA RKT G T+G I GQ+ T ++ R + YVEQFD L + +V E +L
Sbjct: 758 GAGKSTLLDVLANRKTGGHTKGQILINGQERT-KYFTRLSAYVEQFDVLPPTQTVKEAIL 816
Query: 595 YT 600
++
Sbjct: 817 FS 818
Score = 41.2 bits (95), Expect = 0.011
Identities = 37/161 (22%), Positives = 64/161 (38%), Gaps = 4/161 (2%)
Frame = +1
Query: 130 ALPRAGGCKIPSHLNRVAAMGAPLDVEAGGANG----NGDKAQNYVREKSFAPQGMRIIF 297
A P G +IP L D GG N +EK +GM +
Sbjct: 2 APPEIGNDEIP--LQEFGQKSFAADNTIGGMQSISYDNSGAPMGLYKEK----KGMYVTA 55
Query: 298 KDLDYHVPSNTQKGVRAYLLKKVSGFFEAHQMAALMGPSGSGKTTLLDVLAGRKTEGKTE 477
++L + + +KG + +L ++ F + M ++G G GKT+++ LA +
Sbjct: 56 RNLSMSIGTE-KKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALANQLHSETVS 114
Query: 478 GTIAFAGQKPTPQFLRRYTGYVEQFDTLLGSLSVYEMLLYT 600
G++ F G+ R YV Q D + +V E ++
Sbjct: 115 GSLLFNGKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFS 155
>emb|CAD59573.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1468
Score = 85.5 bits (210), Expect = 5e-16
Identities = 54/133 (40%), Positives = 76/133 (56%), Gaps = 6/133 (4%)
Frame = +1
Query: 220 ANGNGDKAQNYVREKSFAPQGMRIIFKDLDYHV--PSNT-QKGV---RAYLLKKVSGFFE 381
ANG G++ F P + + F L+Y+V PS Q+G+ R LL +SG F
Sbjct: 846 ANGEGNRPTQSQFVLPFQP--LSLCFNHLNYYVDMPSEMKQQGLMESRLQLLSDISGAFR 903
Query: 382 AHQMAALMGPSGSGKTTLLDVLAGRKTEGKTEGTIAFAGQKPTPQFLRRYTGYVEQFDTL 561
+ AL+G SG+GKTTL+DVLAGRKT G EG+I +G + R +GY EQ D
Sbjct: 904 PGLLTALVGVSGAGKTTLMDVLAGRKTSGTIEGSITLSGYSKKQETFARISGYCEQADIH 963
Query: 562 LGSLSVYEMLLYT 600
+++VYE +LY+
Sbjct: 964 SPNVTVYESILYS 976
Score = 43.1 bits (100), Expect = 0.003
Identities = 24/69 (34%), Positives = 37/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 QMAALMGPSGSGKTTLLDVLAGRKTEG-KTEGTIAFAGQKPTPQFLRRYTGYVEQFDTLL 564
+M L+GP SGK+TL+ L G+ + K G I + G K + + R + YV Q+D
Sbjct: 205 RMTLLLGPPSSGKSTLMRALTGKLDKNLKVFGNITYCGHKFSEFYPERTSAYVSQYDLHN 264
Query: 565 GSLSVYEML 591
++V E L
Sbjct: 265 AEMTVRETL 273
>emb|CAD59570.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1444
Score = 84.3 bits (207), Expect = 1e-15
Identities = 58/145 (40%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Frame = +1
Query: 184 AMGAPLDVEAGGANGNGDKAQNYVREKSFAPQGMRIIFKDLDYHVPSNTQ---KGV---R 345
+ +P D AG G + F P + I F ++ Y V + KGV R
Sbjct: 813 SQNSPSDANAGRGEITGADTRKRGMVLPFTP--LSITFDNIRYSVDMPQEMKDKGVTEDR 870
Query: 346 AYLLKKVSGFFEAHQMAALMGPSGSGKTTLLDVLAGRKTEGKTEGTIAFAGQKPTPQFLR 525
LLK VSG F + ALMG SG+GKTTL+DVLAGRKT G EG I+ +G +
Sbjct: 871 LLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFA 930
Query: 526 RYTGYVEQFDTLLGSLSVYEMLLYT 600
R GY EQ D ++VYE LLY+
Sbjct: 931 RIAGYCEQNDIHSPHVTVYESLLYS 955
Score = 50.4 bits (119), Expect = 2e-05
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 352 LLKKVSGFFEAHQMAALMGPSGSGKTTLLDVLAGR-KTEGKTEGTIAFAGQKPTPQFLRR 528
+L +SG +M+ L+GP GSGKT+LL LAG+ + K G + + G +R
Sbjct: 169 ILHDISGIIRPGRMSLLLGPPGSGKTSLLLALAGKLDSTLKVSGRVTYNGHDMDEFVPQR 228
Query: 529 YTGYVEQFDTLLGSLSVYEMLLYT 600
+ Y+ Q D +G ++V E L ++
Sbjct: 229 TSAYIGQHDLHIGEMTVRETLAFS 252
>gb|AAL91491.1|AF482385_1 ABC transporter AbcG6 [Dictyostelium discoideum]
Length = 1520
Score = 82.0 bits (201), Expect = 6e-15
Identities = 59/162 (36%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Frame = +1
Query: 154 KIPSHL----NRVAAMGAPLDVEAGGANGNGDKAQNYVREKSFAPQ-GMRIIFKDLDYHV 318
K PS+L N + +P+ N N + + K + G + FK L Y V
Sbjct: 849 KTPSNLSPSVNSPITINSPMPTSPSNNNNNNNSNEKSKNGKDIGSETGSYLQFKKLCYAV 908
Query: 319 ------PSNTQK--GVRAYLLKKVSGFFEAHQMAALMGPSGSGKTTLLDVLAGRKTEGKT 474
P N +K R LL + G+ + QM ALMGPSG+GK+TLLDVLA RKT G
Sbjct: 909 DVKVDDPDNPKKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGGHI 968
Query: 475 EGTIAFAGQKPTPQFLRRYTGYVEQFDTLLGSLSVYEMLLYT 600
G I G KP +F R YVEQ D L + +V E + ++
Sbjct: 969 TGEILING-KPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFS 1009
Score = 47.0 bits (110), Expect = 2e-04
Identities = 27/102 (26%), Positives = 50/102 (48%)
Frame = +1
Query: 280 GMRIIFKDLDYHVPSNTQKGVRAYLLKKVSGFFEAHQMAALMGPSGSGKTTLLDVLAGRK 459
G+ + ++ Y V K V+ L+ +S + + +M ++G G GK+T+ +LAG+
Sbjct: 121 GLYVYCRNATYTVKHRENKKVKIKLIDDISFYLKPKEMTLILGTPGCGKSTIFQMLAGQL 180
Query: 460 TEGKTEGTIAFAGQKPTPQFLRRYTGYVEQFDTLLGSLSVYE 585
+ +G + F G + R YV Q D + +L+V E
Sbjct: 181 KDKHFKGELLFNGHPINHKNHHRDISYVTQDDIHVPTLTVKE 222
>gb|AAL91500.1|AF482393_1 ABC transporter AbcG15 [Dictyostelium discoideum]
Length = 1475
Score = 81.6 bits (200), Expect = 8e-15
Identities = 54/123 (43%), Positives = 71/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 238 KAQNYVREKSFAPQGMRIIFKDLDYHVP--SNTQKGVRAYLLKKVSGFFEAHQMAALMGP 411
+A N ++E P G+ ++ + Y VP NT K LL + G+ + QM ALMG
Sbjct: 826 QATNNMKESLSMPGGL-FTWQHMYYSVPIGGNTMK----LLLDDIQGWIKPGQMTALMGS 880
Query: 412 SGSGKTTLLDVLAGRKTEGKTEGTIAFAGQKPTPQFLRRYTGYVEQFDTLLGSLSVYEML 591
SG+GKTTLLDVLA RKT G+ +GT G KP R TGYVEQ D L +L+V E L
Sbjct: 881 SGAGKTTLLDVLAKRKTTGQVQGTTLLNG-KPLEIDFERITGYVEQMDVLNPALTVRETL 939
Query: 592 LYT 600
++
Sbjct: 940 RFS 942
