Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003094A_C01 KCC003094A_c01
(507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_075157.1| p6.9 [Heliocoverpa armigera nucleopolyhedroviru... 52 6e-06
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 52 6e-06
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 50 2e-05
ref|XP_320463.1| ENSANGP00000016638 [Anopheles gambiae] gi|21288... 43 3e-05
dbj|BAA99536.1| putative gypsy-type retrotransposon RIRE2 GAG-PO... 49 4e-05
>ref|NP_075157.1| p6.9 [Heliocoverpa armigera nucleopolyhedrovirus G4]
gi|15426346|ref|NP_203643.1| unknown [Helicoverpa
armigera nuclear polyhedrosis virus]
gi|18138279|ref|NP_542714.1| ORF91 [Helicoverpa zea
single nucleocapsid nucleopolyhedrovirus]
gi|11095608|gb|AAG29934.1|AF197913_2 basic DNA-binding
protein BDBP [Helicoverpa armigera nuclear polyhedrosis
virus] gi|12483839|gb|AAG53831.1|AF271059_88 p6.9
[Heliocoverpa armigera nucleopolyhedrovirus G4]
gi|15384422|gb|AAK96333.1|AF303045_75 unknown
[Helicoverpa armigera nuclear polyhedrosis virus]
gi|18028661|gb|AAL56097.1|AF334030_22 ORF91 [Helicoverpa
zea single nucleocapsid nucleopolyhedrovirus]
Length = 109
Score = 51.6 bits (122), Expect = 6e-06
Identities = 40/83 (48%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Frame = +2
Query: 281 RRQDGGAGGH--SPGAQSSS--RRRQEATARRGAGGRRRRGRRRIRRRRWRGGGRGRXGS 448
RR+ GG GG S G +SSS RRR + R GGRRR G RRR GGR R G
Sbjct: 19 RRRSGGGGGRRRSGGRRSSSGGRRRSSSGGGRRGGGRRRSGGGGGGRRRRSSGGRRRSG- 77
Query: 449 RGGG----GGGAQRST--RRRQA 499
GGG GGG +RS+ RRR +
Sbjct: 78 -GGGRRRSGGGRRRSSGGRRRSS 99
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/66 (50%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +2
Query: 323 QSSSRRRQEATARRGAGGRRRRGRRRI----RRRRWRGGGR---GRXGSRGGGGGGAQRS 481
QSSS G GGRRR G RR RRR GGGR GR S GGGGG +RS
Sbjct: 10 QSSSGSGGGRRRSGGGGGRRRSGGRRSSSGGRRRSSSGGGRRGGGRRRSGGGGGGRRRRS 69
Query: 482 T--RRR 493
+ RRR
Sbjct: 70 SGGRRR 75
Score = 42.4 bits (98), Expect = 0.003
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 335 RRRQEATARRGAGGRRRR-----GRRRIRRRRWRGGGRGRXGSRGGGGGGAQR 478
RRR + G+GG RRR GRRR RR GGR R S GG GG +R
Sbjct: 4 RRRSSTQSSSGSGGGRRRSGGGGGRRRSGGRRSSSGGRRRSSSGGGRRGGGRR 56
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 51.6 bits (122), Expect = 6e-06
Identities = 44/111 (39%), Positives = 47/111 (41%), Gaps = 13/111 (11%)
Frame = -1
Query: 498 AWRRRVDRCAPPPPPPRLPXR---PLPPPRHRR-----RRMRLRPRRRRPPAPRLAVASW 343
A RRR APPPPPP P R P PPPR R RR PRR PP R S
Sbjct: 603 ARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSP 662
Query: 342 RLRELLWAPGECP-----PAPPSCRRGGHSRHPLTHPHPRAGWRSGGSPSL 205
+ +P P P+PP RR HS P P R SPSL
Sbjct: 663 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRR---SPSL 710
Score = 35.4 bits (80), Expect = 0.41
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Frame = +1
Query: 238 PRMRMSQRMTT----MTPSPTRRRS---GRTFTRSPKQLAEAPRGDGEAGRWRPATARPQ 396
PR R S R T M P P RRS GR RS L+ + + P P+
Sbjct: 374 PRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPK 433
Query: 397 AHPTATMARRRKRTXRKPRRRRRRRATIHAPSPSAR 504
+ RR P RRR R ++ P P R
Sbjct: 434 RTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTR 469
Score = 34.3 bits (77), Expect = 0.92
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = -3
Query: 454 AAASXASSSSSSPSSPSDAPAASPSPAASAPPR--RRL---LAPPR 332
++AS + SSSSS SS S +P P S+PPR RRL +PPR
Sbjct: 408 SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPR 453
Score = 33.9 bits (76), Expect = 1.2
Identities = 32/89 (35%), Positives = 36/89 (39%), Gaps = 6/89 (6%)
Frame = -1
Query: 492 RRRVDRCAPPPPPPRLPXRPLP-PPRHRRRRMRLRPRRRRPPAPRLAVASWRLRELLWAP 316
RRR P P R P R +P PPRHRR R R RRRR A +S +P
Sbjct: 369 RRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGR-RRRRSSASLSGSSSSSSSSRSRSP 427
Query: 315 GECPP-----APPSCRRGGHSRHPLTHPH 244
+ PP P RR S P H
Sbjct: 428 PKKPPKRTSSPPRKTRRLSPSASPPRRRH 456
Score = 33.9 bits (76), Expect = 1.2
Identities = 29/87 (33%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Frame = -1
Query: 501 RAWRRRVDRCAPPPP--------PPRLPXRPLPPPRHRRRRMRLRPRRRRPPAPRLAVAS 346
R R R A P P P R P PPP RRR P PP PR
Sbjct: 568 RRRRHSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPR----- 622
Query: 345 WRLRELLWAPGECPPAPPSCRRGGHSR 265
R R P P+PP RR R
Sbjct: 623 -RRRSPTPPPRRRTPSPPPRRRSPSPR 648
Score = 32.3 bits (72), Expect = 3.5
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = -1
Query: 465 PPPPPRLPXRPLPPPRHRRRRMRLRPRRRRPPAPRLAVASWRLRELLWAPGECPPAPPSC 286
P P PR P PPP R + R+ P+ R R E P+P S
Sbjct: 738 PSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSV 797
Query: 285 RRGGHSRHPLTHPHPRA 235
RR SR P P A
Sbjct: 798 RRVSSSRSVSGSPEPTA 814
Score = 31.6 bits (70), Expect = 5.9
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Frame = -1
Query: 507 SSRAWRRRVDRCAPPPPPPRLPXRPLPPPRHRRRRMRLRPRRR----RPPAPRLAVASWR 340
S R + + R P PPP+ PPP RR P+RR PP R + R
Sbjct: 646 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKR 705
Query: 339 LRELLWAPGECPPAPPSCRRGGHSRHP----LTHPHPRAGWRSGGSP 211
L + +P R S P P PRA S P
Sbjct: 706 RSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPP 752
Score = 31.6 bits (70), Expect = 5.9
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +1
Query: 241 RMRMSQRMTTMTPSPTRRRSGRTFTRSPKQLAEAPRGDGEAGRWRPATARPQAHPTATMA 420
R R + +PSP +R+ SP++ +P R P+ A P P
Sbjct: 568 RRRRHSPSRSASPSPRKRQK----ETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPP-- 621
Query: 421 RRRKRTXRKPRRRRRRRATIHAPSPSARR 507
RR+R+ P RRR SPS RR
Sbjct: 622 -RRRRSPTPPPRRRTPSPPPRRRSPSPRR 649
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 49.7 bits (117), Expect = 2e-05
Identities = 38/94 (40%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Frame = -1
Query: 498 AWRRRVDRCAPPPPPPRLPXR----PLPPPRHRR-----RRMRLRPRRRRPPAPRLAVAS 346
A RRR APPPPPP P R P PPPR R RR PRR PP R S
Sbjct: 567 ARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPS 626
Query: 345 WRLRELLWAPGECP-----PAPPSCRRGGHSRHP 259
+ +P P P+PP RR HS P
Sbjct: 627 PPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP 660
Score = 38.1 bits (87), Expect = 0.063
Identities = 21/45 (46%), Positives = 23/45 (50%), Gaps = 7/45 (15%)
Frame = -1
Query: 477 RCAPPPPPPR-------LPXRPLPPPRHRRRRMRLRPRRRRPPAP 364
R +P PPP R P P PPP RRRR P RRR P+P
Sbjct: 559 RRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSP 603
Score = 35.4 bits (80), Expect = 0.41
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Frame = +1
Query: 238 PRMRMSQRMTT----MTPSPTRRRS---GRTFTRSPKQLAEAPRGDGEAGRWRPATARPQ 396
PR R S R T M P P RRS GR RS L+ + + P P+
Sbjct: 315 PRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPK 374
Query: 397 AHPTATMARRRKRTXRKPRRRRRRRATIHAPSPSAR 504
+ RR P RRR R ++ P P R
Sbjct: 375 RTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTR 410
Score = 34.3 bits (77), Expect = 0.92
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = -3
Query: 454 AAASXASSSSSSPSSPSDAPAASPSPAASAPPR--RRL---LAPPR 332
++AS + SSSSS SS S +P P S+PPR RRL +PPR
Sbjct: 349 SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPR 394
Score = 33.9 bits (76), Expect = 1.2
Identities = 32/89 (35%), Positives = 36/89 (39%), Gaps = 6/89 (6%)
Frame = -1
Query: 492 RRRVDRCAPPPPPPRLPXRPLP-PPRHRRRRMRLRPRRRRPPAPRLAVASWRLRELLWAP 316
RRR P P R P R +P PPRHRR R R RRRR A +S +P
Sbjct: 310 RRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGR-RRRRSSASLSGSSSSSSSSRSRSP 368
Query: 315 GECPP-----APPSCRRGGHSRHPLTHPH 244
+ PP P RR S P H
Sbjct: 369 PKKPPKRTSSPPRKTRRLSPSASPPRRRH 397
Score = 32.3 bits (72), Expect = 3.5
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = -1
Query: 465 PPPPPRLPXRPLPPPRHRRRRMRLRPRRRRPPAPRLAVASWRLRELLWAPGECPPAPPSC 286
P P PR P PPP R + R+ P+ R R E P+P S
Sbjct: 703 PSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSV 762
Query: 285 RRGGHSRHPLTHPHPRA 235
RR SR P P A
Sbjct: 763 RRVSSSRSVSGSPEPAA 779
Score = 32.3 bits (72), Expect = 3.5
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Frame = -1
Query: 507 SSRAWRRRVDRCAPPPPPPRLPXRPLPPPRHRRRRMRLRPRRR----RPPAPRLAVASWR 340
S R + + R P PPP+ PPP RR P+RR PP R + R
Sbjct: 611 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKR 670
Query: 339 LRELLWAPGECPPAPPSCRRGGHSRHP----LTHPHPRAGWRSGGSP 211
L + +P R S P P PRA S P
Sbjct: 671 RSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPP 717
>ref|XP_320463.1| ENSANGP00000016638 [Anopheles gambiae] gi|21288411|gb|EAA00732.1|
ENSANGP00000016638 [Anopheles gambiae str. PEST]
Length = 246
Score = 42.7 bits (99), Expect(2) = 3e-05
Identities = 27/68 (39%), Positives = 35/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 436 SSSSSSPSSPSDAPAASPSPAASAPPRRRLLAPPRA--ALGSW*MSSRSAVLSARGS*SS 263
S SPS P +P ++P+ S PP R LLAPP A +G S + S+ S
Sbjct: 163 SPLQGSPSYPHRSPQSAPAVEVSLPPDRELLAPPVALTGIGVGATSDPEMMTSSESDGSD 222
Query: 262 SSDSSSSE 239
SDSSSS+
Sbjct: 223 DSDSSSSD 230
Score = 25.8 bits (55), Expect(2) = 3e-05
Identities = 9/17 (52%), Positives = 12/17 (69%)
Frame = -1
Query: 492 RRRVDRCAPPPPPPRLP 442
+ R++ AP PPPP LP
Sbjct: 113 KTRIENKAPNPPPPTLP 129
>dbj|BAA99536.1| putative gypsy-type retrotransposon RIRE2 GAG-POL precursor [Oryza
sativa (japonica cultivar-group)]
Length = 1032
Score = 48.9 bits (115), Expect = 4e-05
Identities = 34/78 (43%), Positives = 36/78 (45%), Gaps = 10/78 (12%)
Frame = +2
Query: 293 GGAGGHSPGAQSSSRRRQEATARRGAG-----GRRRR-----GRRRIRRRRWRGGGRGRX 442
G G P RR +T GAG GRRR GR R RRR R RG
Sbjct: 14 GMDGPDRPKPIGRLRRAVASTGTAGAGPTDHRGRRRAVTGDGGRHRERRRAAREAARGNG 73
Query: 443 GSRGGGGGGAQRSTRRRQ 496
GS G GGGGA R RRR+
Sbjct: 74 GSEGEGGGGAHRGARRRR 91
