KCC003086A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003086A_C01 KCC003086A_c01
tatgcgtgcatacaaagccgtaATTTGGGACACATTTACCTGACGACCTCGTTCAATCAA
GGGCTTGCGAACACATCCTCGCAACAACCGATTCGCGCTGTTAGCTGGTGGTACCTCTTG
ATGGTGACGGCCCCGCTGCGACCCTCTTCTTTCTGGACCCATAGGAGTGCAGCGACCGGG
CCCCGCAGCAGTCACGCTGCGCGAGGGCCCGGCGGTCGACAACTATTATGTCCGCCTTTA
CGCGGAACTATACCTAGAGATGCACCGTCTGCATATGATGTCGACACAAACGGGCGGCCG
GCTGTGGCGGTGTCTGGTTCGCACGGGGTCGGAGAGAACGGGAACGGCAGCAGCACAAAT
GGCTCGTCTGGCCTGTCAAAAAGCGACTACTCGAAGTTCGTGCAGTTCTTCCGGCAAGCA
AGCCCATATGTGGAGGGCCACCGCGGGCGAACATTTGTGATCGTCATTCCAGGCGTGGTT
TCAGCGAATCGGTCGCTCCTGCAGAGTATAATGTCAGACATCGCCCTCCTGCACGGCCTG
GGGGTGCAGCTGATTGTCGTCGCGGGCGTGAACCAGCAAATCGATGACATGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003086A_C01 KCC003086A_c01
         (593 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC22279.1| amino acid acetyltransferase(N-acetylglutamate s...    74  2e-12
ref|NP_568032.1| aspartate/glutamate/uridylate kinase family [Ar...    65  5e-10
pir||T04724 hypothetical protein F19F18.160 - Arabidopsis thalia...    65  5e-10
ref|ZP_00067718.1| COG0548: Acetylglutamate kinase [Microbulbife...    64  2e-09
ref|NP_404636.1| amino-acid acetyltransferase [Yersinia pestis] ...    62  5e-09

>dbj|BAC22279.1| amino acid acetyltransferase(N-acetylglutamate synthase)-like
           protein [Oryza sativa (japonica cultivar-group)]
          Length = 575

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
 Frame = +1

Query: 142 PSSFWTHRSAATGPRSSHAARGPG--GRQLLCPPLRGTIPRDAPSAYDVDTNGRPAVAVS 315
           PSS  + R+AA G  ++ AARG     R L  PP  G                R      
Sbjct: 4   PSSVASARAAAEGA-ATVAARGGAEPARALRLPPANGA--------------RRGVRCCC 48

Query: 316 GSHGVGENGNGSSTNGSSGLSKSDYSKFVQFFRQASPYVEGHRGRTFVIVIPGVVSANRS 495
           G+     N  G S  G   +++ +   FV FFR+A PY+ GHRG TFV+VI   V +   
Sbjct: 49  GA----ANPGGGSGGGGGAVAREE---FVGFFREAWPYIRGHRGSTFVVVISSEVVSGPH 101

Query: 496 LLQSIMSDIALLHGLGVQLIVVAGVNQQIDDM 591
               I+ DI+LLHGLG+Q ++V G + QID +
Sbjct: 102 -FDGILQDISLLHGLGIQFVLVPGTHVQIDKL 132

>ref|NP_568032.1| aspartate/glutamate/uridylate kinase family [Arabidopsis thaliana]
          Length = 543

 Score = 65.5 bits (158), Expect = 5e-10
 Identities = 31/69 (44%), Positives = 47/69 (67%)
 Frame = +1

Query: 385 DYSKFVQFFRQASPYVEGHRGRTFVIVIPGVVSANRSLLQSIMSDIALLHGLGVQLIVVA 564
           D  +FV++FR+A PY+  HRG TFV++I G + A  S   +I+ DIA LH LG++ ++V 
Sbjct: 80  DDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSS-CDAILKDIAFLHHLGIRFVLVP 138

Query: 565 GVNQQIDDM 591
           G  +QID +
Sbjct: 139 GTQEQIDQL 147

>pir||T04724 hypothetical protein F19F18.160 - Arabidopsis thaliana
           gi|4468992|emb|CAB38306.1| putative protein [Arabidopsis
           thaliana] gi|7270749|emb|CAB80432.1| putative protein
           [Arabidopsis thaliana]
          Length = 571

 Score = 65.5 bits (158), Expect = 5e-10
 Identities = 31/69 (44%), Positives = 47/69 (67%)
 Frame = +1

Query: 385 DYSKFVQFFRQASPYVEGHRGRTFVIVIPGVVSANRSLLQSIMSDIALLHGLGVQLIVVA 564
           D  +FV++FR+A PY+  HRG TFV++I G + A  S   +I+ DIA LH LG++ ++V 
Sbjct: 80  DDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSS-CDAILKDIAFLHHLGIRFVLVP 138

Query: 565 GVNQQIDDM 591
           G  +QID +
Sbjct: 139 GTQEQIDQL 147

>ref|ZP_00067718.1| COG0548: Acetylglutamate kinase [Microbulbifer degradans 2-40]
          Length = 439

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 31/64 (48%), Positives = 47/64 (73%)
 Frame = +1

Query: 394 KFVQFFRQASPYVEGHRGRTFVIVIPGVVSANRSLLQSIMSDIALLHGLGVQLIVVAGVN 573
           ++V +FR +SPY+  HRG+TFVI++PG    ++    +I+SDIALL+ LGV+L+VV G  
Sbjct: 7   QYVNWFRASSPYINAHRGKTFVIMLPG-DCIDQPNFPNIISDIALLNSLGVKLVVVHGAR 65

Query: 574 QQID 585
            QI+
Sbjct: 66  TQIE 69

>ref|NP_404636.1| amino-acid acetyltransferase [Yersinia pestis]
           gi|22127038|ref|NP_670461.1| N-acetylglutamate synthase
           [Yersinia pestis KIM] gi|28376864|sp|Q8ZH86|ARGA_YERPE
           Amino-acid acetyltransferase (N-acetylglutamate
           synthase) (AGS) (NAGS) gi|25286349|pir||AF0125
           amino-acid N-acetyltransferase (EC 2.3.1.1) [imported] -
           Yersinia pestis (strain CO92)
           gi|15979090|emb|CAC89865.1| amino-acid acetyltransferase
           [Yersinia pestis CO92]
           gi|21960087|gb|AAM86712.1|AE013916_9 N-acetylglutamate
           synthase [Yersinia pestis KIM]
          Length = 441

 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 30/69 (43%), Positives = 45/69 (64%)
 Frame = +1

Query: 379 KSDYSKFVQFFRQASPYVEGHRGRTFVIVIPGVVSANRSLLQSIMSDIALLHGLGVQLIV 558
           K   ++ VQ FR + PY+  HRG+TFV+++ G    + +   SI++DI LLH LG++L+V
Sbjct: 2   KERSTELVQGFRHSVPYINAHRGKTFVVMLGGEAIEHENF-SSIVNDIGLLHSLGIRLVV 60

Query: 559 VAGVNQQID 585
           V G   QID
Sbjct: 61  VYGARPQID 69



EST assemble image


clone accession position
1 LCL010f04_r AV626526 1 465
2 LCL026g08_r AV627439 23 431
3 LCL094a09_r AV631445 162 426
4 MX226f06_r BP090623 172 593




Chlamydomonas reinhardtii
Kazusa DNA Research Institute