Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003084A_C01 KCC003084A_c01
(580 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_148836.2| RIKEN cDNA 2810012G03 [Mus musculus] gi|3042470... 36 0.44
gb|AAO72541.1| pathogenesis-related protein-like protein [Oryza ... 35 0.58
ref|NP_057689.1| putative nuclear protein [Homo sapiens] gi|7547... 35 0.58
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 35 0.75
ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty ... 35 0.75
>ref|XP_148836.2| RIKEN cDNA 2810012G03 [Mus musculus] gi|30424703|ref|NP_780313.1|
RIKEN cDNA 2810012G03 [Mus musculus]
gi|26336511|dbj|BAC31938.1| unnamed protein product [Mus
musculus] gi|34785326|gb|AAH57111.1| 2810012G03Rik
protein [Mus musculus]
Length = 393
Score = 35.8 bits (81), Expect = 0.44
Identities = 29/88 (32%), Positives = 41/88 (45%)
Frame = -2
Query: 444 QWSPRPRRTLPFAGSWSTLATPLVRC*RIRYLGSPERRRQKTPTRQLWPARARALIPTPS 265
Q S +P T P +GSW + A L C P+RR +P+ L P +R L +
Sbjct: 200 QDSAQPCATSPQSGSWESDAESLSPC-------PPQRRFSLSPS--LGPQASRFL--PSA 248
Query: 264 RSTPADQPCFKFSSSPERLMPRVRQRSC 181
RS+PA P + R +PR R + C
Sbjct: 249 RSSPASSPELPWRPRGLRNLPRSRSQPC 276
>gb|AAO72541.1| pathogenesis-related protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 170
Score = 35.4 bits (80), Expect = 0.58
Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Frame = -1
Query: 571 PPSARSPAQAVCINDARKPGSPMTESCMLSWLSQGAFSSEEASMESTSAQDAPFCWQL-V 395
P R+P +C N PG+P T + L Q F + AS S+SA +P L V
Sbjct: 11 PTELRAPEMTLCANSCGFPGNPATNN-----LCQNCFLAASASSSSSSAAASPSTTSLPV 65
Query: 394 HPCHAPCALLENSLFGLARATKTENADEAIMASSGSSSNPDSIAFNTCRS 245
P S A A E + SS +S S+ N C S
Sbjct: 66 FPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSV--NRCHS 113
>ref|NP_057689.1| putative nuclear protein [Homo sapiens]
gi|7547033|gb|AAF63766.1|AF251040_1 putative nuclear
protein [Homo sapiens] gi|12652997|gb|AAH00259.1| C5orf6
protein [Homo sapiens] gi|31418332|gb|AAH52993.1|
Putative nuclear protein [Homo sapiens]
Length = 392
Score = 35.4 bits (80), Expect = 0.58
Identities = 29/88 (32%), Positives = 40/88 (44%)
Frame = -2
Query: 444 QWSPRPRRTLPFAGSWSTLATPLVRC*RIRYLGSPERRRQKTPTRQLWPARARALIPTPS 265
Q S RP P +GSW + A L C P+RR +P+ L P +R L +
Sbjct: 200 QDSSRPCAASPQSGSWESDAESLSPC-------PPQRRFSLSPS--LGPQASRFL--PSA 248
Query: 264 RSTPADQPCFKFSSSPERLMPRVRQRSC 181
RS+PA P + R +PR R + C
Sbjct: 249 RSSPASSPELPWRPRGLRNLPRSRSQPC 276
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 35.0 bits (79), Expect = 0.75
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -2
Query: 363 RIRYLGSPERRRQKTPTRQLWPARARALIPTPSRSTPADQPCFKFSSSPERLMPRVRQR 187
R R P RR+++P+ P R R P P R TP+ P + S SP R P +++R
Sbjct: 546 RRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP-RRRSPSPRRYSPPIQRR 603
>ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty of prolines 101-l;
Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-like) [Homo sapiens]
gi|3005587|gb|AAC09321.1| Ser/Arg-related nuclear matrix
protein [Homo sapiens]
gi|33150824|gb|AAP97290.1|AF419855_1 Ser/Arg-related
nuclear matrix protein [Homo sapiens]
Length = 820
Score = 35.0 bits (79), Expect = 0.75
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -2
Query: 363 RIRYLGSPERRRQKTPTRQLWPARARALIPTPSRSTPADQPCFKFSSSPERLMPRVRQR 187
R R P RR+++P+ P R R P P R TP+ P + S SP R P +++R
Sbjct: 544 RRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP-RRRSPSPRRYSPPIQRR 601
