Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003083A_C01 KCC003083A_c01
(413 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD45498.1|AF126746_1 zinc finger protein splice variant FIZ1... 33 1.2
ref|NP_035943.2| Flt3 interacting zinc finger protein 1 [Mus mus... 33 1.2
gb|AAO50790.1| hypothetical protein [Dictyostelium discoideum] 32 2.1
ref|ZP_00007430.1| COG0841: Cation/multidrug efflux pump [Rhodob... 32 2.7
ref|NP_231465.1| sensor histidine kinase [Vibrio cholerae O1 bio... 31 3.5
>gb|AAD45498.1|AF126746_1 zinc finger protein splice variant FIZ1-A [Mus musculus]
gi|5579309|gb|AAD45499.1|AF126747_1 zinc finger protein
splice variant FIZ1-B [Mus musculus]
Length = 500
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -3
Query: 381 HKGQSPRP*GPLRGLPPTLLPTTSPSYARANVHECCLIPGTDSSGG 244
H+G P P P GLPP +SP NV C + G SSGG
Sbjct: 136 HRGTLPSPLQPSPGLPPL----SSPCSVCCNVGPCSVCGGGGSSGG 177
>ref|NP_035943.2| Flt3 interacting zinc finger protein 1 [Mus musculus]
gi|13879316|gb|AAH06633.1| Flt3 interacting zinc finger
protein 1 [Mus musculus]
Length = 500
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -3
Query: 381 HKGQSPRP*GPLRGLPPTLLPTTSPSYARANVHECCLIPGTDSSGG 244
H+G P P P GLPP +SP NV C + G SSGG
Sbjct: 136 HRGTLPSPLQPSPGLPPL----SSPCSVCCNVGPCSVCGGGGSSGG 177
>gb|AAO50790.1| hypothetical protein [Dictyostelium discoideum]
Length = 634
Score = 32.0 bits (71), Expect = 2.1
Identities = 13/30 (43%), Positives = 15/30 (49%)
Frame = -1
Query: 401 GLPLASCTKANHRDRKDRCEDCPRHCCQPH 312
GL + CT D C DCP +C QPH
Sbjct: 156 GLEIQRCTYGVQIDTSLVCRDCPLNCSQPH 185
>ref|ZP_00007430.1| COG0841: Cation/multidrug efflux pump [Rhodobacter sphaeroides]
Length = 1026
Score = 31.6 bits (70), Expect = 2.7
Identities = 13/49 (26%), Positives = 29/49 (58%), Gaps = 5/49 (10%)
Frame = +3
Query: 240 GILLNYRYLVLDNIHEHL-----PSHTTVMWLAAVSGAVLAAVLTVAVI 371
G++++ +V++NIH H+ P H + + ++G V+A +T+A +
Sbjct: 397 GLVVDDAIVVVENIHRHIDEGMSPYHAALKGMREITGPVIAMTITLAAV 445
>ref|NP_231465.1| sensor histidine kinase [Vibrio cholerae O1 biovar eltor str.
N16961] gi|11356137|pir||C82151 sensor histidine kinase
VC1831 [imported] - Vibrio cholerae (strain N16961
serogroup O1) gi|9656358|gb|AAF94979.1| sensor histidine
kinase [Vibrio cholerae O1 biovar eltor str. N16961]
Length = 736
Score = 31.2 bits (69), Expect = 3.5
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 239 WHPPELSV--PGIRQHS*TFALAYDGDVVGSSVGGSPRSGPYGRGDWPL 379
W P LS P +R S F A DG V S +P++G Y R W L
Sbjct: 107 WPEPNLSATDPSLRYDSLFFNKATDGQVDQLSSWNNPKAGGYDRESWYL 155
