Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003080A_C01 KCC003080A_c01
(491 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00082555.1| hypothetical protein [Geobacter metallireducens] 36 0.22
ref|NP_008987.1| splicing factor, arginine/serine-rich 16 (suppr... 36 0.22
gb|AAQ89303.1| SWAP2 [Homo sapiens] 36 0.22
ref|XP_322132.1| hypothetical protein [Neurospora crassa] gi|289... 35 0.38
pir||S46965 microfilarial sheath protein - nematode (Brugia paha... 35 0.65
>ref|ZP_00082555.1| hypothetical protein [Geobacter metallireducens]
Length = 231
Score = 36.2 bits (82), Expect = 0.22
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 459 SGPLAS-RKWIHPRSRPGRRSRS-AHWHHAGVAAPAEARASRSTARFAGTTTAL 304
SGP +S R W P +RPGR S + + W HA + P R RS A + T L
Sbjct: 16 SGPSSSGRAWWRPTARPGRFSATPSSWRHAAWSPPFPCRGVRSAALGGDSATPL 69
>ref|NP_008987.1| splicing factor, arginine/serine-rich 16
(suppressor-of-white-apricot homolog, Drosophila);
suppressor of white apricot homolog 2 [Homo sapiens]
gi|34925328|sp|Q8N2M8|SFRG_HUMAN Splicing factor,
arginine/serine-rich 16 (Suppressor of white-apricot
homolog 2) gi|3941326|gb|AAC82339.1| suppressor of white
apricot homolog 2 [Homo sapiens]
gi|3941338|gb|AAC82340.1| suppressor of white-apricot
homolog 2 [Homo sapiens]
Length = 659
Score = 36.2 bits (82), Expect = 0.22
Identities = 50/145 (34%), Positives = 59/145 (40%), Gaps = 11/145 (7%)
Frame = -3
Query: 489 ARSCPGEGC-RSGPLA---SRKWIHPRSRPGR--RSRSAHWHHAGVAAPAEARASRSTAR 328
+RS G G RSG A SR W RSR R RSRS H+G + R SRS AR
Sbjct: 385 SRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPAR 444
Query: 327 FAGTTTALM*KEVPREKCTRCASRLRLPSGPCLCRHNATKTGEPHVDSRAQPCTWNLS-- 154
G PR + SR R SG R+ G H S +W+LS
Sbjct: 445 RGGYG--------PRRR-----SRSRSHSGD---RYRRGGRGLRHHSSSRSRSSWSLSPS 488
Query: 153 ---SCA*SQPDSPPRQRCTKRSRKR 88
S S+ SP + RSR R
Sbjct: 489 RSRSLTRSRSHSPSPSQSRSRSRSR 513
>gb|AAQ89303.1| SWAP2 [Homo sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.22
Identities = 50/145 (34%), Positives = 59/145 (40%), Gaps = 11/145 (7%)
Frame = -3
Query: 489 ARSCPGEGC-RSGPLA---SRKWIHPRSRPGR--RSRSAHWHHAGVAAPAEARASRSTAR 328
+RS G G RSG A SR W RSR R RSRS H+G + R SRS AR
Sbjct: 400 SRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPAR 459
Query: 327 FAGTTTALM*KEVPREKCTRCASRLRLPSGPCLCRHNATKTGEPHVDSRAQPCTWNLS-- 154
G PR + SR R SG R+ G H S +W+LS
Sbjct: 460 RGGYG--------PRRR-----SRSRSHSGD---RYRRGGRGLRHHSSSRSRSSWSLSPS 503
Query: 153 ---SCA*SQPDSPPRQRCTKRSRKR 88
S S+ SP + RSR R
Sbjct: 504 RSRSLTRSRSHSPSPSQSRSRSRSR 528
>ref|XP_322132.1| hypothetical protein [Neurospora crassa] gi|28917207|gb|EAA26921.1|
hypothetical protein [Neurospora crassa]
Length = 853
Score = 35.4 bits (80), Expect = 0.38
Identities = 18/54 (33%), Positives = 27/54 (49%)
Frame = -3
Query: 432 IHPRSRPGRRSRSAHWHHAGVAAPAEARASRSTARFAGTTTALM*KEVPREKCT 271
+ RSRPG R+ S H H ++ P E AS+ T + A ++PR + T
Sbjct: 700 VDDRSRPGERAASGHNEHYRISQPTEIHASQETLAASPLPDARAPADIPRIEST 753
>pir||S46965 microfilarial sheath protein - nematode (Brugia pahangi)
gi|516355|emb|CAA84597.1| microfilarial sheath protein
[Brugia pahangi]
Length = 228
Score = 34.7 bits (78), Expect = 0.65
Identities = 24/69 (34%), Positives = 32/69 (45%), Gaps = 2/69 (2%)
Frame = +3
Query: 174 AVPLSPHAARQSWSRCADRGMAPRAASVARRSVCT--SRAAPPFTSRRWWCPRIGQWTLM 347
A P +P A + + AP AA VA R+ + AAP T WWCP + Q
Sbjct: 59 AAPAAPAPAPAAPAPAVPAAPAP-AAPVAPRAPAAPAAPAAPMQTKSLWWCPPMYQKPPR 117
Query: 348 HAPLLEQPP 374
P++ QPP
Sbjct: 118 KYPMVPQPP 126
