KCC003073A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003073A_C01 KCC003073A_c01
tatgTACGTAAAAGGGTATTGCCTTTCATCGCTGATGCATTTCCGATAACAATAGTCCCC
CTGAGCCAAGCAGGCCTTACAGCCAAGGTGCGACCGGCCCATGGAGGAATGGAGGAACGA
GAGAAGCTGGAAAAAGAAATTAGTGACATAGAAGCGCAGATAGTCCGCGTGACGCCCCAA
GCAGAGTCGGCCCAAGCAAAGGATGAGGACAAGCGGTACTTCCGGGAGAAGGAGCTCCTG
CTACGGAAAGAGAAGCTCCTGCTCCTCGAAAAGCTTGAGAAGCTCGGAGCGCGCGCCTCG
GCGGCTGGCCTGGGCGTGGGGAGCGCGGCAGGACCCGCCTCGGCGGCTGGACTGGGCGTG
GAGAGCGCGGCAGGAGCTGACACGAGCACCACCTTCATCCGGGACGTCCTGTTCGCGGGA
CCGGCGAATGTCGTGAACCTGTTTAGCGTGCCGCAGGCAGGCCTGGACCAGCCGCTGGGT
GCTAAGCTGCCGGTGTCCAGCTGGGCTTTGCAAGCGCTGGGGTCCAGCGATCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003073A_C01 KCC003073A_c01
         (534 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       48  7e-05
emb|CAB46679.1| proteophosphoglycan [Leishmania major]                 47  2e-04
ref|NP_497276.2| RNA-binding protein S1 serine-rich domain like ...    42  0.004
sp|Q9UKN7|MY15_HUMAN Myosin XV (Unconventional myosin-15) gi|113...    42  0.004
ref|NP_057323.2| myosin XV; unconventional myosin-15 [Homo sapiens]    42  0.004

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPSPAAE 339
            +ACK + ++ S APS  S  A  + +     + P+  +S       SAP+A S+ +P++ 
Sbjct: 658  NACKPETESSSSAPSASSSSASSSSS-----SAPSASSSSAPSSSSSAPSASSSSAPSSS 712

Query: 338  AG-PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVTRT 162
            +  P+A  +  P++ + APS SS S   S S    +S S     SSS   A S+   + +
Sbjct: 713  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 772

Query: 161  ICASMSLISFSSFSRSSIPPWAGRTLA 81
              ++ S  S S+ S SS  P A  + A
Sbjct: 773  SSSAPSASSSSAPSSSSSAPSASSSSA 799

 Score = 41.6 bits (96), Expect = 0.007
 Identities = 45/148 (30%), Positives = 70/148 (46%), Gaps = 2/148 (1%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PSPA 345
            S+  A   + S APS  S  A  + +   + A  A+ +S       SAP+A S+  PS +
Sbjct: 886  SSSSAPSSSSSSAPSASSSSAPSSSS---SSAPSASSSSAPSSSSSSAPSASSSSAPSSS 942

Query: 344  AEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVTR 165
            + + P+A  +  P++ + APS SS S   S S    +S S     SSS A + S+     
Sbjct: 943  SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 1002

Query: 164  TICASMSLISFSSFSRSSIPPWAGRTLA 81
            +  ++ S  S S+ S SS  P A  + A
Sbjct: 1003 SSSSAPSASSSSAPSSSSSAPSASSSSA 1030

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PS 351
            PSA  +    + S APS  S  A  + +     + P+  +S       SAP+A S+  PS
Sbjct: 716  PSASSSSAPSSSSSAPSASSSSAPSSSS-----SAPSASSSSAPSSSSSAPSASSSSAPS 770

Query: 350  PAAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGV 171
             ++ + P+A  +  P++ + APS SS S   S S  + S+ S     SSS A + S+   
Sbjct: 771  SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSA 830

Query: 170  TRTICASMSLISFSSFSRSSIPPWAGRTLA 81
              +  ++ S  S S+ S SS  P A  + A
Sbjct: 831  PSSSSSAPSASSSSAPSSSSSAPSASSSSA 860

 Score = 40.4 bits (93), Expect = 0.015
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPSPA 345
            PSA  +    + S APS  S  A  +    ++ A  A+ +S       SAP+A S+ +P+
Sbjct: 947  PSASSSSAPSSSSSAPSASSSSAPSS----SSSAPSASSSSAPSSSSSSAPSASSSSAPS 1002

Query: 344  AEAG-PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVT 168
            + +  P+A  +  P++ + APS SS S   S S    +S S     SSS   A S+   +
Sbjct: 1003 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPS 1062

Query: 167  RTICASMSLISFSSFSRSSIPPWAGRTLA 81
             +  ++ S  S S+ S SS  P A  + A
Sbjct: 1063 SSSSSAPSASSSSAPSSSSSAPSASSSSA 1091

 Score = 40.0 bits (92), Expect = 0.019
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PSPA 345
            S+  A   + S APS  S  A  + +     + P+  +S       SAP+A S+  PS +
Sbjct: 934  SSSSAPSSSSSSAPSASSSSAPSSSS-----SAPSASSSSAPSSSSSAPSASSSSAPSSS 988

Query: 344  AEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVTR 165
            + + P+A  +  P++ + APS SS S   S S    +S S     SSS   A S+   + 
Sbjct: 989  SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 1048

Query: 164  TICASMSLISFSSFSRSSIPPWAGRTLA 81
            +  A  +  S +  S SS  P A  + A
Sbjct: 1049 SSSAPSASSSSAPSSSSSSAPSASSSSA 1076

 Score = 39.7 bits (91), Expect = 0.025
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPSPAAE 339
            S+  A   + S APS  S  A  +    ++ A  A+ +S       SAP+A S+ +P++ 
Sbjct: 764  SSSSAPSSSSSSAPSASSSSAPSS----SSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 819

Query: 338  AG-PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVTRT 162
            +  P+A  +  P++ + APS SS S   S S    +S S     SSS   A S+   + +
Sbjct: 820  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 879

Query: 161  ICASMSLISFSSFSRSSIPPWAGRTLA 81
              A  +  S +  S SS  P A  + A
Sbjct: 880  SSAPSASSSSAPSSSSSSAPSASSSSA 906

 Score = 39.3 bits (90), Expect = 0.033
 Identities = 42/142 (29%), Positives = 66/142 (45%), Gaps = 3/142 (2%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PS 351
            PSA  +    + S APS  S  A  +    ++ + P+  +S       SAP+A S+  PS
Sbjct: 746  PSASSSSAPSSSSSAPSASSSSAPSS----SSSSAPSASSSSAPSSSSSAPSASSSSAPS 801

Query: 350  PAAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGV 171
             ++ + P+A  +  P++ + APS SS S   S S    +S S     SSS   A S+   
Sbjct: 802  SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAP 861

Query: 170  TRTICASMSLISFSSFSRSSIP 105
            + +  A  +  S +  S SS P
Sbjct: 862  SSSSSAPSASSSSAPSSSSSAP 883

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 42/144 (29%), Positives = 65/144 (44%), Gaps = 2/144 (1%)
 Frame = -2

Query: 530  SLDPSACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPS 351
            S   S+  A   + S APS  S  A       ++ + P++ +S       SAP++ S+ +
Sbjct: 752  SAPSSSSSAPSASSSSAPSSSSSSAPSA----SSSSAPSSSSSAPSASSSSAPSSSSSSA 807

Query: 350  PAAEAG--PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAW 177
            P+A +   P++  +   A+ + APS SS + S S S    SS S     SSS   + S+ 
Sbjct: 808  PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA 867

Query: 176  GVTRTICASMSLISFSSFSRSSIP 105
                +  A  S  S  S S SS P
Sbjct: 868  PSASSSSAPSSSSSAPSASSSSAP 891

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRF---TTFAGPANRTSRMKVVLVSAPAALST-PS 351
            S+  A   + S APS  S  A  + +     ++ + P++ +S       SAP++ S+ PS
Sbjct: 795  SSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPS 854

Query: 350  PAAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFA---WADSA 180
             ++ + P++  +   A+ + APS SS + S S S    SS S     SSS A    + SA
Sbjct: 855  ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSA 914

Query: 179  WGVTRTICASMSLISFSSFSRSSIP 105
               + +   S S  S  S S SS P
Sbjct: 915  PSASSSSAPSSSSSSAPSASSSSAP 939

 Score = 38.1 bits (87), Expect = 0.073
 Identities = 43/145 (29%), Positives = 67/145 (45%), Gaps = 3/145 (2%)
 Frame = -2

Query: 530  SLDPSACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST-P 354
            S   S+  A   + S APS  S  A       ++ + P++ +S       SAP++ S+ P
Sbjct: 783  SAPSSSSSAPSASSSSAPSSSSSSAPSA----SSSSAPSSSSSAPSASSSSAPSSSSSAP 838

Query: 353  SPAAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSS--FAWADSA 180
            S ++ + P++  +   A+ + APS SS + S S S    SS S     SSS   + + SA
Sbjct: 839  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 898

Query: 179  WGVTRTICASMSLISFSSFSRSSIP 105
               + +   S S  S  S S SS P
Sbjct: 899  PSASSSSAPSSSSSSAPSASSSSAP 923

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 41/139 (29%), Positives = 67/139 (47%), Gaps = 2/139 (1%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPSPA 345
            PSA  +    + S APS  S  A  +    ++ + P+  +S       SAP+A S+ +P+
Sbjct: 962  PSASSSSAPSSSSSAPSASSSSAPSS----SSSSAPSASSSSAPSSSSSAPSASSSSAPS 1017

Query: 344  AEAG-PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVT 168
            + +  P+A  +  P++ + APS SS S   S S    +S S     SSS A + S+    
Sbjct: 1018 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 1077

Query: 167  RTICASMSLISFSSFSRSS 111
             +  ++ S  S S+ S SS
Sbjct: 1078 SSSSSAPSASSSSAPSSSS 1096

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 40/155 (25%), Positives = 69/155 (43%), Gaps = 1/155 (0%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPSPAAE 339
            S+  A   + S APS  S  A  + +     + P+  +S       SAP+A S+ +P++ 
Sbjct: 980  SSSSAPSSSSSSAPSASSSSAPSSSS-----SAPSASSSSAPSSSSSAPSASSSSAPSSS 1034

Query: 338  AG-PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVTRT 162
            +  P+A  +  P++ + APS SS S   S S  + S+ S     SSS A + S+     +
Sbjct: 1035 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 1094

Query: 161  ICASMSLISFSSFSRSSIPPWAGRTLAVRPAWLRG 57
              + +S         S +P +    +A    +L G
Sbjct: 1095 SSSFLSGSGSDGGCHSDVPYYTPTQVAHSMRFLSG 1129

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 46/151 (30%), Positives = 71/151 (46%), Gaps = 4/151 (2%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PS 351
            PSA  +    + S APS  S  A  + +   + A  A+ +S       SAP+A S+  PS
Sbjct: 868  PSASSSSAPSSSSSAPSASSSSAPSSSS---SSAPSASSSSAPSSSSSSAPSASSSSAPS 924

Query: 350  PAAEAGPAALPTPRPAAEAR-APSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWG 174
             ++ + P+A  +  P++ +  APS SS S   S S    +S S     SSS   A S+  
Sbjct: 925  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA 984

Query: 173  VTRTICASMSLISFSSFSRSSIPPWAGRTLA 81
             + +  ++ S  S S+ S SS  P A  + A
Sbjct: 985  PSSSSSSAPSASSSSAPSSSSSAPSASSSSA 1015

 Score = 35.0 bits (79), Expect = 0.61
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRF---TTFAGPANRTSRMKVVLVSAPAALST- 357
            PSA  +    + S APS  S  A  + +     ++ + P++ +S       SAP++ S+ 
Sbjct: 808  PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA 867

Query: 356  PSPAAEAGPAALPTPRPAAEARAPSFSSFS----------RSRSFSFRSRSSFSRKYRLS 207
            PS ++ + P++  +   A+ + APS SS S           S S S  S SS S     S
Sbjct: 868  PSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 927

Query: 206  SSFAWADSAWGVTRTICASMSLISFSSFSRSSIPPWAGRTLA 81
            SS   A S+   + +  ++ S  S S+ S SS  P A  + A
Sbjct: 928  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSA 969

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 43/141 (30%), Positives = 68/141 (47%), Gaps = 4/141 (2%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PS 351
            PSA  +    + S APS  S  A  +    ++ A  A+ +S       SAP+A S+  PS
Sbjct: 853  PSASSSSAPSSSSSAPSASSSSAPSS----SSSAPSASSSSAPSSSSSSAPSASSSSAPS 908

Query: 350  PAAEAGPAALPTPRPAAEAR-APSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWG 174
             ++ + P+A  +  P++ +  APS SS S   S S  + S+ S     SSS A + S+  
Sbjct: 909  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSS 968

Query: 173  VTRTICASMSLISFSSFSRSS 111
               +  ++ S  S S+ S SS
Sbjct: 969  APSSSSSAPSASSSSAPSSSS 989

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
 Frame = -2

Query: 530  SLDPSACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST-P 354
            S   S+  A   + S APS  S     +    ++ A  ++ +S       SAP++ S+ P
Sbjct: 953  SAPSSSSSAPSASSSSAPSSSSSAPSAS----SSSAPSSSSSSAPSASSSSAPSSSSSAP 1008

Query: 353  SPAAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWG 174
            S ++ + P++  +   A+ + APS SS + S S S    SS S     SSS   + S+  
Sbjct: 1009 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 1068

Query: 173  VTRTICASMSLISFSSFSRSSIPP 102
             + +  ++ S  S +  + SS  P
Sbjct: 1069 PSASSSSAPSSSSSAPSASSSSAP 1092

>emb|CAB46679.1| proteophosphoglycan [Leishmania major]
          Length = 873

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 47/160 (29%), Positives = 77/160 (47%), Gaps = 14/160 (8%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLN---RFTTFAGPANRTSRMKVVLVSAPAALST--- 357
            +ACK + ++ S APS  S  A  + +     ++ + P++ +S       SAP++ S+   
Sbjct: 611  NACKPETESSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAP 670

Query: 356  -------PSPAAEAGPAALPTPRPAAEARAPSFSSFSR-SRSFSFRSRSSFSRKYRLSSS 201
                   PS ++ + P+A  +  P++ + APS SS S  S S S  S SS S     SSS
Sbjct: 671  SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSS 730

Query: 200  FAWADSAWGVTRTICASMSLISFSSFSRSSIPPWAGRTLA 81
               A S+   + +  ++ S  S S+ S SS  P A  + A
Sbjct: 731  APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSA 770

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
 Frame = -2

Query: 521  PSACKAQL-DTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST--PS 351
            PSA  +    + S APS  S  A  +    ++ A  A+ +S       SAP+A S+  PS
Sbjct: 686  PSASSSSAPSSSSSAPSASSSSAPSS----SSSAPSASSSSAPSSSSSSAPSASSSSAPS 741

Query: 350  PAAEAGPAALPTPRPAAEARAPSFSSFSR-SRSFSFRSRSSFSRKYRLSSSFAWADSAWG 174
             ++ + P+A  +  P++ + APS SS S  S S S  S SS S     SSS   A S+  
Sbjct: 742  SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSA 801

Query: 173  VTRTICASMSLISFSSFSRSS 111
             + +  ++ S  S S+ S SS
Sbjct: 802  PSSSSSSAPSASSSSAPSSSS 822

 Score = 35.0 bits (79), Expect = 0.61
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
 Frame = -2

Query: 530  SLDPSACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALSTPS 351
            S   S+  A   + S APS  S     +    ++ A  ++ +S       SAP++ S+ +
Sbjct: 692  SAPSSSSSAPSASSSSAPSSSSSAPSAS----SSSAPSSSSSSAPSASSSSAPSSSSSSA 747

Query: 350  PAAEAG--PAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFA---WAD 186
            P+A +   P++  +   A+ + APS SS + S S S    SS S     SSS A    + 
Sbjct: 748  PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 807

Query: 185  SAWGVTRTICASMSLISFSSFSRSSIP 105
            SA   + +   S S  S  S S SS P
Sbjct: 808  SAPSASSSSAPSSSSSSAPSASSSSAP 834

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 46/161 (28%), Positives = 71/161 (43%), Gaps = 11/161 (6%)
 Frame = -2

Query: 530  SLDPSACKAQLDTGSLAPSGWSRPACGTLNRFTTFAGPANRTSRMKVVLVSAPAALST-P 354
            S   S+  A   + S APS  S  A    +   + A  ++ +S       SAP++ S+ P
Sbjct: 707  SAPSSSSSAPSASSSSAPSSSSSSAPSASS---SSAPSSSSSSAPSASSSSAPSSSSSAP 763

Query: 353  SPAAEAGPAALPTPRPAAEARAPSFSSFS----------RSRSFSFRSRSSFSRKYRLSS 204
            S ++ + P++  +   A+ + APS SS S           S S S  S SS S     SS
Sbjct: 764  SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 823

Query: 203  SFAWADSAWGVTRTICASMSLISFSSFSRSSIPPWAGRTLA 81
            S   A S+   + +  ++ S  S S+ S SS  P A  + A
Sbjct: 824  SAPSASSSSAPSSSSSSAPSASSSSASSSSSSAPSASSSSA 864

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 39/141 (27%), Positives = 64/141 (44%), Gaps = 3/141 (2%)
 Frame = -2

Query: 518  SACKAQLDTGSLAPSGWSRPACGTLNRF---TTFAGPANRTSRMKVVLVSAPAALSTPSP 348
            S+  A   + S APS  S  A  + +     ++ + P++ +S       SAP++ S+ +P
Sbjct: 735  SSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAP 794

Query: 347  AAEAGPAALPTPRPAAEARAPSFSSFSRSRSFSFRSRSSFSRKYRLSSSFAWADSAWGVT 168
            +A +  A   +   ++ A + S SS   S S S  S SS S     SSS   A S+   +
Sbjct: 795  SASSSSAPSSS---SSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSASS 851

Query: 167  RTICASMSLISFSSFSRSSIP 105
             +  A  +  S +  S SS P
Sbjct: 852  SSSSAPSASSSSAPSSSSSAP 872

>ref|NP_497276.2| RNA-binding protein S1 serine-rich domain like (rnp-4)
           [Caenorhabditis elegans] gi|16950442|gb|AAK21429.2| Rnp
           (rrm rna binding domain) containing protein 4
           [Caenorhabditis elegans]
          Length = 289

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 30/74 (40%), Positives = 35/74 (46%)
 Frame = +2

Query: 209 TSGTSGRRSSCYGKRSSCSSKSLRSSERAPRRLAWAWGARQDPPRRLDWAWRARQELTRA 388
           +SG+S   SS  G RSS SS S RS  R+PRR          PP R     R+R  + R 
Sbjct: 21  SSGSSSSGSSSSGSRSSSSSSSGRSRSRSPRR------RDTRPPAR---GGRSRSPIRRG 71

Query: 389 PPSSGTSCSRDRRM 430
            P  G    RDR M
Sbjct: 72  SPPRGARADRDRPM 85

>sp|Q9UKN7|MY15_HUMAN Myosin XV (Unconventional myosin-15) gi|11360331|pir||A59266
            unconventional myosin-15 - human
            gi|6224683|gb|AAF05903.1| unconventional myosin-15 [Homo
            sapiens]
          Length = 3530

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 39/103 (37%), Positives = 45/103 (42%), Gaps = 7/103 (6%)
 Frame = -3

Query: 478  PAAGPGLPAAR*TGSRHSPVPRT-GRPG*RWCSCQLLPRSPR------PVQPPRRVLPRS 320
            P A P     R      SP P     PG  +CS  L P SP+      P QPP   LP +
Sbjct: 758  PGASPRASRRRAWSPLASPQPSLRSSPGLGYCS-PLAPPSPQLSLRTGPFQPP--FLPPA 814

Query: 319  PRPGQPPRRALRASQAFRGAGASLSVAGAPSPGSTACPHPLLG 191
             RP     R+L+ S A R A   L   G+P PGS   P P LG
Sbjct: 815  RRP-----RSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLG 852

>ref|NP_057323.2| myosin XV; unconventional myosin-15 [Homo sapiens]
          Length = 3530

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 39/103 (37%), Positives = 45/103 (42%), Gaps = 7/103 (6%)
 Frame = -3

Query: 478  PAAGPGLPAAR*TGSRHSPVPRT-GRPG*RWCSCQLLPRSPR------PVQPPRRVLPRS 320
            P A P     R      SP P     PG  +CS  L P SP+      P QPP   LP +
Sbjct: 758  PGASPRASRRRAWSPLASPQPSLRSSPGLGYCS-PLAPPSPQLSLRTGPFQPP--FLPPA 814

Query: 319  PRPGQPPRRALRASQAFRGAGASLSVAGAPSPGSTACPHPLLG 191
             RP     R+L+ S A R A   L   G+P PGS   P P LG
Sbjct: 815  RRP-----RSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLG 852



EST assemble image


clone accession position
1 LCL008g01_r AV626415 1 455
2 MXL025e01_r BP094598 60 593
3 LCL061h08_r AV629608 64 511




Chlamydomonas reinhardtii
Kazusa DNA Research Institute