KCC003071A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003071A_C01 KCC003071A_c01
gagctgcAGAGCATGCTGGAGACGGTGCAGAACCAGCGCAACGAGCTGCGCCAGCAGGTC
AAGGCCGAGCTGGCGGCCCGCGCGGATCTGGAGCGCAGCGTGGAGGAGATGAAGGCGGAG
CTGGAGGTGGTGAGCCGCGGCAAGCTGGAGGAGGCCACGGCGGCGCTGGCGGCGGAGACC
GTGAACCGGGAGAAGCTGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003071A_C01 KCC003071A_c01
         (200 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07961 myosin heavy chain - Chlamydomonas reinhardtii gi|33...   122  1e-27
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    56  2e-07
gb|AAA85515.1| Wiscott-Aldrich Syndrome protein homolog                56  2e-07
ref|NP_033541.1| Wiskott-Aldrich syndrome homolog; Wiskott-Aldri...    56  2e-07
emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    56  2e-07

>pir||T07961 myosin heavy chain - Chlamydomonas reinhardtii
            gi|3342148|gb|AAC27525.1| myosin heavy chain
            [Chlamydomonas reinhardtii]
          Length = 1643

 Score =  122 bits (307), Expect = 1e-27
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +1

Query: 1    ELQSMLETVQNQRNELRQQVKAELAARADLERSVEEMKAELEVVSRGKLEEATAALAAET 180
            ELQSMLETVQNQRNELRQQVKAELAARADLERSVEEMKAELEVVSRGKLEEATAALAAET
Sbjct: 901  ELQSMLETVQNQRNELRQQVKAELAARADLERSVEEMKAELEVVSRGKLEEATAALAAET 960

Query: 181  VNREKL 198
            VNREKL
Sbjct: 961  VNREKL 966

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 33/72 (45%), Positives = 36/72 (49%), Gaps = 6/72 (8%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPAC---RGSPPPAPPSSPPRCAPDP---RGPPARP*PAGAARC 38
           PA P +R P P PP PPPA       PPP PP++ P   P P    GP ARP PA  A  
Sbjct: 139 PAPPAAR-PAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATP 197

Query: 37  AGSAPSPACSAA 2
              AP PA   A
Sbjct: 198 TPVAPPPAAPTA 209

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
 Frame = -2

Query: 199 PASPGSRSPP---------PAPPWPPPACRGSPPPAP--------PSSPPRCAPDPRGPP 71
           P  P +  PP         P PP PPPA R +PPP P        PS PP  AP    P 
Sbjct: 76  PPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPT 135

Query: 70  ARP*PAGAARCAGSAPSPACSAA 2
             P    AAR A + P+P  +AA
Sbjct: 136 PPPPAPPAARPAPTPPAPPPAAA 158

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 33/66 (49%), Gaps = 1/66 (1%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGS-PPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAP 23
           P  P +  P P PP PPPA   + P PAP ++P   AP P  P ARP     A      P
Sbjct: 165 PPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTP 224

Query: 22  SPACSA 5
           +PA +A
Sbjct: 225 TPAPTA 230

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 30/67 (44%), Positives = 33/67 (48%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 PASPGSRSPPPAPP-WPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAP 23
           PA+P   + PP PP  PPPA     P APP  PP  A  P  PP  P PA     A   P
Sbjct: 67  PAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPA-----APKQP 121

Query: 22  SPACSAA 2
           SP  +AA
Sbjct: 122 SPPPAAA 128

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPR-GPPARP*PAGAARCAGSAP 23
           P  P   +PP AP  P      + PP PP++PP  A  PR   P  P P  AAR A   P
Sbjct: 52  PKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPP 111

Query: 22  SPACSA 5
            P  +A
Sbjct: 112 PPPPAA 117

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 30/69 (43%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = -2

Query: 199 PASPGSRSPPPAP--PWPPPACRGS------PPPAPPSSPPRCAPDPRGPPARP*PAGAA 44
           PA P    PP AP  P PPPA          PPPAPP++ P  AP P  PP    PA A 
Sbjct: 106 PAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARP--APTPPAPP----PAAAP 159

Query: 43  RCAGSAPSP 17
           + A   P P
Sbjct: 160 QHAPPPPPP 168

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/66 (36%), Positives = 26/66 (39%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P   G    P  PP  PP       PA P++PP  A  P  P A P  A   R A   P 
Sbjct: 39  PQETGPDGKPKQPPKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPP 98

Query: 19  PACSAA 2
           P   AA
Sbjct: 99  PPPPAA 104

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 32/73 (43%), Positives = 37/73 (49%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPW--PPPACRGSPPPA--PPSSPPRCAPDPRGPPARP-*PAGAARCA 35
           PA  G+ +PPP  P   P P  +G  PPA  P +  P   P   G PARP  PAGAA   
Sbjct: 315 PAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAAPAGAA--- 371

Query: 34  GSAPS--PACSAA 2
             APS  P  +AA
Sbjct: 372 --APSTVPGSAAA 382

 Score = 41.6 bits (96), Expect = 0.004
 Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
 Frame = -2

Query: 196 ASPGSRSPPPAPPW-----PPPACR-GSPP-----PAPPSSP-PRCAPDPRG----PPAR 65
           A+P   S P APP      PPP  R GSPP     PAP ++P P   P P G    P  R
Sbjct: 236 ATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGR 295

Query: 64  P*PAGAARCAGSAPSPACSAA 2
           P PA       + P+P  + A
Sbjct: 296 PGPASTPAPGAATPAPTATPA 316

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
 Frame = -2

Query: 199 PASPGSRSPPPAP-----PWPPPACRGSPPP-------APPSSPPRCAPDPRGPPARP*P 56
           PA+P +R   PAP     P P PA   +P P       + P +PP   P    P  RP  
Sbjct: 204 PAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRP-- 261

Query: 55  AGAARCAGSAPSPACSAA 2
            G+   AGS P+P  + A
Sbjct: 262 -GSPPAAGSPPAPGATPA 278

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
 Frame = -2

Query: 199 PASPGSRSPPPAP-----PWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCA 35
           PA+  + +P PAP     P   PA  GS P APP+  P  AP P   P  P  AG+    
Sbjct: 216 PAATPAPTPTPAPTATPAPTATPA-PGSTPGAPPAGRPG-APPPGVRPGSPPAAGSPPAP 273

Query: 34  GSAPSPACSAA 2
           G+ P+P  + A
Sbjct: 274 GATPAPTTTPA 284

 Score = 38.9 bits (89), Expect = 0.023
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPP-APPSSPPRCAPDPR-----GPPARP*PAGAARC 38
           PA   + +P   P  PP    G+PPP   P SPP     P       P   P P G A  
Sbjct: 232 PAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATP 291

Query: 37  AGSAPSPACSAA 2
               P PA + A
Sbjct: 292 PSGRPGPASTPA 303

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
 Frame = -2

Query: 199 PASPGSRSPP---------PAPPWPPPACRGSPPP----APPSSPPRCAPDPRGPPARP* 59
           PA  G+ +PP         PAP    PA   +P P     PP   P   P P GP     
Sbjct: 283 PAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTP-GPQGGTP 341

Query: 58  PAGAARCAGSAPSP 17
           PAGA   AG+  +P
Sbjct: 342 PAGAP-AAGTPAAP 354

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 22/63 (34%), Positives = 28/63 (43%), Gaps = 5/63 (7%)
 Frame = -2

Query: 190 PGSRSPPPAPPWPP-----PACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSA 26
           PGS   PPA   PP     PA   +P P   ++PP   P   GP + P P  A     + 
Sbjct: 261 PGS---PPAAGSPPAPGATPAPTTTPAPGGTATPPSGRP---GPASTPAPGAATPAPTAT 314

Query: 25  PSP 17
           P+P
Sbjct: 315 PAP 317

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 23/70 (32%), Positives = 29/70 (40%), Gaps = 9/70 (12%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWP-----PPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAAR-- 41
           P +PG+   P   P P     PP+  G P PA   +P    P P   PA   P GA    
Sbjct: 270 PPAPGATPAPTTTPAPGGTATPPS--GRPGPASTPAPGAATPAPTATPA---PGGALTPP 324

Query: 40  --CAGSAPSP 17
               G+ P+P
Sbjct: 325 PGRPGAGPTP 334

>gb|AAA85515.1| Wiscott-Aldrich Syndrome protein homolog
          Length = 520

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 28/70 (40%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAP---------DPRGPPARP*PAGA 47
           P   G   PPP P  PPP  RG PPP PP +  R  P          P  PP  P P   
Sbjct: 361 PVPMGGAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPP 420

Query: 46  ARCAGSAPSP 17
             C GS P+P
Sbjct: 421 PPCPGSGPAP 430

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPW-------PPPACRGS------PPPAPPSSPPRC-APDPRGPPARP 62
           P  PG   PPP PP        PPP   G+      PPP PP  PP C    P  PP  P
Sbjct: 376 PPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPP 435

Query: 61  *PAGAARCAGSAPSP 17
            P      +G +P+P
Sbjct: 436 TPV-----SGGSPAP 445

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/48 (45%), Positives = 25/48 (51%), Gaps = 7/48 (14%)
 Frame = -2

Query: 199 PASPGSRSPP----PAPPWPPPACRGS---PPPAPPSSPPRCAPDPRG 77
           P  PG+  PP    P PP PPP C GS   PPP PP+     +P P G
Sbjct: 400 PPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSPAPGG 447

 Score = 33.9 bits (76), Expect = 0.73
 Identities = 21/51 (41%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
 Frame = -2

Query: 166 APPWPPPACRGSPPP-APPSSPPRCAPDPRGPPARP*PAGAARCAGSAPSP 17
           +PP PP    G+PPP  P   PP   P   GPP  P PA     +G  P P
Sbjct: 356 SPPLPPVPMGGAPPPPTPRGPPP---PGRGGPPPPPPPATGR--SGPPPPP 401

>ref|NP_033541.1| Wiskott-Aldrich syndrome homolog; Wiskott-Aldrich syndrome protein
           [Mus musculus] gi|2499130|sp|P70315|WASP_MOUSE
           Wiskott-Aldrich syndrome protein homolog (WASp)
           gi|1314755|gb|AAC52556.1| Wiskott-Aldrich Syndrome
           Protein gi|4096355|gb|AAC99855.1| Wiskott-Aldrich
           syndrome protein (WASP) [Mus musculus]
           gi|1584081|prf||2122283A Wiskott-Aldrich syndrome
           protein
          Length = 520

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 28/70 (40%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAP---------DPRGPPARP*PAGA 47
           P   G   PPP P  PPP  RG PPP PP +  R  P          P  PP  P P   
Sbjct: 361 PVPMGGAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPP 420

Query: 46  ARCAGSAPSP 17
             C GS P+P
Sbjct: 421 PPCPGSGPAP 430

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPW-------PPPACRGS------PPPAPPSSPPRC-APDPRGPPARP 62
           P  PG   PPP PP        PPP   G+      PPP PP  PP C    P  PP  P
Sbjct: 376 PPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPP 435

Query: 61  *PAGAARCAGSAPSP 17
            P      +G +P+P
Sbjct: 436 TPV-----SGGSPAP 445

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 22/48 (45%), Positives = 25/48 (51%), Gaps = 7/48 (14%)
 Frame = -2

Query: 199 PASPGSRSPP----PAPPWPPPACRGS---PPPAPPSSPPRCAPDPRG 77
           P  PG+  PP    P PP PPP C GS   PPP PP+     +P P G
Sbjct: 400 PPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSPAPGG 447

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 22/61 (36%), Positives = 23/61 (37%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P   GS      P  P P     PPP P   PP   P   GPP  P PA     +G  P 
Sbjct: 346 PPVVGSNKGRSGPLPPVPMGGAPPPPTPRGPPP---PGRGGPPPPPPPATGR--SGPPPP 400

Query: 19  P 17
           P
Sbjct: 401 P 401

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 30/61 (49%), Positives = 34/61 (55%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P SP    PP  PP PPP    SPPP+PP SPP  +P PR PP+ P P      + S PS
Sbjct: 169 PPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPP-SPPPRPPPS-PNPPSPRPPSPSPPS 226

Query: 19  P 17
           P
Sbjct: 227 P 227

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = -2

Query: 199 PASPGSRSPPPAPP-WPPPACRGSPPPAPPSSPPRC---APDPRGPPARP 62
           P  P S SPPP+PP  PPP+   SPPP+PP SPP     +P PR PP+ P
Sbjct: 144 PPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPP 193

 Score = 53.9 bits (128), Expect = 7e-07
 Identities = 24/48 (50%), Positives = 24/48 (50%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P  P S  PPP PP PPP     PPP PP  PP   P P  PP  P P
Sbjct: 105 PPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSP 152

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -2

Query: 199 PASPGSRSPPPAP--PWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSA 26
           P+ P  R PPPAP  P PPP     P P PPS PP   P P  PP  P P      +   
Sbjct: 239 PSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRP 298

Query: 25  PSPA 14
           P P+
Sbjct: 299 PKPS 302

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPD--PRGPPARP*PAGAARCAGSA 26
           P SP    PP  PP PPP+   SPPP+PP SPP   P   P  PP  P P+   R     
Sbjct: 153 PPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPPR---PP 209

Query: 25  PSP 17
           PSP
Sbjct: 210 PSP 212

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 30/62 (47%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P   SPPP PP PPP     PPP+PP  PP   P P  PP  P P   +     +P 
Sbjct: 103 PPPPPPPSPPPPPPPPPP-----PPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPP 157

Query: 19  PA 14
           P+
Sbjct: 158 PS 159

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAP--DPRGPPARP*PAGAARCAGSA 26
           P  P +  PPP PP P P+   SPPP+PP SPP   P   P  PP  P P+   R   S 
Sbjct: 133 PPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSP 192

Query: 25  P 23
           P
Sbjct: 193 P 193

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 29/62 (45%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    PPP+PP PPP     PPP PP SPP   P P  PP  P P         +P 
Sbjct: 99  PPPPPPPPPPPSPPPPPP-----PPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPP 153

Query: 19  PA 14
           P+
Sbjct: 154 PS 155

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 30/61 (48%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P S  PPP PP PPP    +PPP PP  PP  +P P  PP+ P     +      PS
Sbjct: 119 PPPPPSPPPPPPPPPPPPP---NPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPS 175

Query: 19  P 17
           P
Sbjct: 176 P 176

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 27/62 (42%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    PPP PP PPP     PPP PP  PP   P P  PP  P P          PS
Sbjct: 90  PPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPS 149

Query: 19  PA 14
           P+
Sbjct: 150 PS 151

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 23/46 (50%), Positives = 24/46 (52%)
 Frame = -2

Query: 193 SPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           SP    PPP PP PPP     PPP+PP  PP   P P  PP  P P
Sbjct: 86  SPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPP 131

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 23/48 (47%), Positives = 24/48 (49%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P  P    PPP PP PPP     PPP PP  PP  +P P  PP  P P
Sbjct: 89  PPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPP 136

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 25/61 (40%), Positives = 28/61 (44%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P+ P +  P P PP PPP     P P PP  PP   P PR PP  P P      + S P 
Sbjct: 301 PSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPK 360

Query: 19  P 17
           P
Sbjct: 361 P 361

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 26/49 (53%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWP-PPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P  P S SPPP PP P PP     PPP PP SPP   P P  PP  P P
Sbjct: 79  PPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPP 127

 Score = 50.4 bits (119), Expect = 8e-06
 Identities = 25/61 (40%), Positives = 26/61 (41%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    P P PP PPP     P P PPS PP   P P  PP  P P      +   PS
Sbjct: 231 PRRPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPS 290

Query: 19  P 17
           P
Sbjct: 291 P 291

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 27/61 (44%), Positives = 28/61 (45%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P  R P P+PP P P  R  PP  PPS PP   P P  PP RP P          PS
Sbjct: 212 PNPPSPRPPSPSPPSPRPPPR-RPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPS 270

Query: 19  P 17
           P
Sbjct: 271 P 271

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 25/49 (51%), Positives = 26/49 (53%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PA 53
           P SP S  PPP PP PPP     PPP PP  PP   P P  PP  P P+
Sbjct: 82  PPSP-SPPPPPPPPVPPP-----PPPPPPPPPPPSPPPPPPPPPPPPPS 124

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -2

Query: 199 PASPGSRSPPPA--PPWPPPACRGSP-PPAPPSSPPRCAPDPRGPPARP 62
           P+ P  R PPP+  PP PPP     P PP PPS PPR    P  PP RP
Sbjct: 334 PSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRP 382

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 24/48 (50%), Positives = 24/48 (50%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P  P    PPP PP PPP    SPPP PP  PP   P P  PP  P P
Sbjct: 88  PPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPP---PPPSPPPPPPPP 132

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 22/48 (45%), Positives = 24/48 (49%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P+ P    PPP PP PPP     P P+PP  PP   P P  PP  P P
Sbjct: 60  PSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPP 107

 Score = 47.8 bits (112), Expect = 5e-05
 Identities = 22/46 (47%), Positives = 22/46 (47%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP 62
           P  P   SP P PP PPP     PPP PP  PP   P P  PP  P
Sbjct: 77  PQPPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPP 122

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPS-SPPRCAPDPRGPPARP*PAGAARCAGSAP 23
           P SP    PP  PP PPP+    P P PPS SPP   P PR PP  P      R    AP
Sbjct: 193 PPSPPPSPPPSPPPRPPPS-PNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAP 251

Query: 22  SP 17
            P
Sbjct: 252 PP 253

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 22/46 (47%), Positives = 22/46 (47%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP 62
           P SP    PP  PP PPP    SP P  P  P    P PR PP RP
Sbjct: 189 PPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRP 234

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/48 (47%), Positives = 25/48 (51%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P+ P    PP  PP PPP     PPP PPS PP   P P  PP+ P P
Sbjct: 85  PSPPPPPPPPVPPPPPPP----PPPPPPPSPPPPPPPPPPPPPSPPPP 128

 Score = 47.0 bits (110), Expect = 8e-05
 Identities = 23/49 (46%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 199 PASPGSRSPPPA---PPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP 62
           P SP    PPP    PP PPP     P P PPS  P   P P  PP RP
Sbjct: 323 PPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRP 371

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 30/81 (37%), Positives = 31/81 (38%), Gaps = 20/81 (24%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPP------------------SSPPRCA--PDPR 80
           P SP  R PP  PP PPP+   SPPP PP                    PPR    P P 
Sbjct: 181 PPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPS 240

Query: 79  GPPARP*PAGAARCAGSAPSP 17
            PP RP P          PSP
Sbjct: 241 PPPPRPPPPAPPPPRPPPPSP 261

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 22/48 (45%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P  P    PPP PP PP      PPP P   PP   P P  PP+ P P
Sbjct: 67  PPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPP 114

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 26/64 (40%), Positives = 31/64 (47%), Gaps = 3/64 (4%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWP---PPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGS 29
           P  P    PPP+PP P   PP+ R  P P+PP++P    P P  PP RP P         
Sbjct: 274 PLPPPPSPPPPSPPPPSPLPPSPR-PPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPP 332

Query: 28  APSP 17
            PSP
Sbjct: 333 PPSP 336

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 23/48 (47%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P   G   PPP PP PPP  +   PP+P   PP   P P  PP  P P
Sbjct: 58  PTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPP 105

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWP---PPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGS 29
           P +P  R PPP PP P   PP+     PP P   PPR  P    PP  P P+ +      
Sbjct: 304 PNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPP 363

Query: 28  APSP 17
            PSP
Sbjct: 364 PPSP 367

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 24/61 (39%), Positives = 26/61 (42%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    P P PP PPP     PPP PP  PP   P P  PP+ P     +      PS
Sbjct: 115 PPPPPPPPPSPPPPPPPPP---PPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPS 171

Query: 19  P 17
           P
Sbjct: 172 P 172

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 22/47 (46%), Positives = 24/47 (50%), Gaps = 1/47 (2%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAP-DPRGPPARP 62
           P  P    P P PP P P  +  PPP+PP  PPR  P  PR PP  P
Sbjct: 341 PPPPSPNPPRPPPPSPSPP-KPPPPPSPPPRPPRRPPRPPRRPPTAP 386

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 27/68 (39%), Positives = 31/68 (44%), Gaps = 6/68 (8%)
 Frame = -2

Query: 199 PASPGSRSPPPAPP---WPPPACRGSPPPAPP---SSPPRCAPDPRGPPARP*PAGAARC 38
           P  P  R P P+PP   +P P     PPP PP    +PPR  P P  PP RP P      
Sbjct: 291 PLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPR-PPPPSPPPPRPPPPSPNPP 349

Query: 37  AGSAPSPA 14
               PSP+
Sbjct: 350 RPPPPSPS 357

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 199 PASPGSRSPPPAP--PWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSA 26
           P+ P    PPP+P  P PPP     P P PP   P   P PR PP  P P      + + 
Sbjct: 269 PSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNP 328

Query: 25  PSP 17
           P P
Sbjct: 329 PRP 331

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 20/41 (48%), Positives = 21/41 (50%)
 Frame = -2

Query: 175 PPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PA 53
           PPP PP P P    SP P PP  PP   P P  PP  P P+
Sbjct: 70  PPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPS 110

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 23/48 (47%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPP--PAPPSSPPRCAPDPRGPPARP 62
           P  P    PPP PP P P     PP  P+PP  PP  +P PR PP RP
Sbjct: 329 PRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPR-PPRRP 375

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 23/61 (37%), Positives = 24/61 (38%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    P P PP P P     P P PP+ PP   P P   P RP P          PS
Sbjct: 286 PPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPS 345

Query: 19  P 17
           P
Sbjct: 346 P 346

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 22/48 (45%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*P 56
           P +P     PP PP PPP     PPP PP  P    P P  PP  P P
Sbjct: 57  PPTPSGPEHPPPPPPPPP-----PPPQPPLPPSPSPPPPPPPPVPPPP 99

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 22/52 (42%), Positives = 24/52 (45%), Gaps = 4/52 (7%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSP----PRCAPDPRGPPARP*P 56
           P SP   +PPP  P P P+    PPP PP  P    P   P P  PP  P P
Sbjct: 43  PGSPPPGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPP 94

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 21/46 (45%), Positives = 23/46 (49%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP 62
           P  P   SPPP  P PPP+     PP P  SPP+  P P  PP  P
Sbjct: 328 PPRPPPPSPPPPRP-PPPSPNPPRPPPPSPSPPKPPPPPSPPPRPP 372

 Score = 41.6 bits (96), Expect = 0.004
 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAP---------PSSPPRCAPDPRGPPARP 62
           PA P  R PPP+PP P P     PPP P         P  P    P PR P   P
Sbjct: 249 PAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSP 303

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAP--PSSPPRCAPDPRGPPARP*P 56
           PA+P   SPPP  P P     G PPP P  P  PP   P P  PP  P P
Sbjct: 38  PAAPPPGSPPPGTPPP-----GVPPPTPSGPEHPPPPPPPPPPPPQPPLP 82

 Score = 40.4 bits (93), Expect = 0.008
 Identities = 22/61 (36%), Positives = 24/61 (39%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPS 20
           P  P    P P PP PPP     PPP  P+ P    P P  P   P P+   R     P 
Sbjct: 321 PPPPSPNPPRPPPPSPPPP---RPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPR 377

Query: 19  P 17
           P
Sbjct: 378 P 378

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = -2

Query: 199 PASPGSRSPPPAPPWPP-PACRGSPPPAPP---SSPPRCAPDPRG 77
           P SP    PPP  P PP P    SPPP PP     PPR  P   G
Sbjct: 343 PPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRPPTAPG 387

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/56 (37%), Positives = 24/56 (42%)
 Frame = -2

Query: 184 SRSPPPAPPWPPPACRGSPPPAPPSSPPRCAPDPRGPPARP*PAGAARCAGSAPSP 17
           +R PPP    P  A   +P   PP SPP   P P  PP  P P+G        P P
Sbjct: 21  ARKPPPRRS-PVVALVETPAAPPPGSPPPGTPPPGVPP--PTPSGPEHPPPPPPPP 73



EST assemble image


clone accession position
1 LCL008c05_r AV626387 1 190
2 LCL091a03_r AV631256 8 200




Chlamydomonas reinhardtii
Kazusa DNA Research Institute