KCC003069A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003069A_C01 KCC003069A_c01
ccactggcggcgacgtgggcggGGAGGAGATGAGCAGCCCAAGCCGCTGCGAGGAGGGCG
TGGCGGCGCCGCGCTCACAGTCGCCCGCACCGCAGCTGCCTGCAGCCACACTGGCGGAGG
CCGCACAGGCGGAGGCGGCACTGGCGGAGGCCGCCACGCACACGTCCGTGCCGGAGCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003069A_C01 KCC003069A_c01
         (180 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T48827 hypothetical protein 68B2.110 [imported] - Neurospor...    45  2e-04
dbj|BAA20466.1| insoluble protein [Pinctada fucata]                    45  3e-04
emb|CAD70966.1| probable Cytokinesis protein sepA [Neurospora cr...    44  0.001
dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (jap...    44  0.001
ref|XP_327870.1| hypothetical protein [Neurospora crassa] gi|289...    44  0.001

>pir||T48827 hypothetical protein 68B2.110 [imported] - Neurospora crassa
           gi|7635814|emb|CAB88619.1| putative protein [Neurospora
           crassa]
          Length = 344

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 8   RRRGRGGDEQPKPLRGGRGGAALTVARTAAACSHTGGGRT----GGGGTGGGRHAHVR 169
           R+RGRGG E+     GG   AA     TAAA     GG      GGGG GGGR+ H R
Sbjct: 226 RKRGRGGKEEGAGEEGGSERAAKQQKTTAAAPQENKGGNQRQGGGGGGAGGGRNRHGR 283

>dbj|BAA20466.1| insoluble protein [Pinctada fucata]
          Length = 738

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 28/56 (50%), Positives = 29/56 (51%)
 Frame = +2

Query: 11  RRGRGGDEQPKPLRGGRGGAALTVARTAAACSHTGGGRTGGGGTGGGRHAHVRAGA 178
           RRGRG        RGGR  AA   A  AAA +  GGG  GGGG GGG  A   A A
Sbjct: 311 RRGRG--------RGGRRRAAAAAAAAAAAAAGGGGGGGGGGGGGGGAGAAAAAAA 358

 Score = 35.0 bits (79), Expect = 0.34
 Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 47  LRGGRGGAALTVARTAAACSHTGGGRTGG-GGTGGGRHAHVRAGA 178
           L GG GG AL  A  AA     G G  GG GG GGG  A   A A
Sbjct: 472 LGGGGGGGALAAALAAAGAGGGGFGGLGGLGGLGGGSAAAAAAAA 516

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
 Frame = +2

Query: 41  KPLRGGRGGAALTVARTAAACSHTGGGRTG----------GGGTGGGRHAHVRAGA 178
           + +RGG   AA   A  AAA    GGG  G          GGG GGG  A   A A
Sbjct: 533 RQMRGGGSAAAAAAAAAAAAGGGWGGGMGGGFGVGLGGGFGGGFGGGSSAAAAAAA 588

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 24/54 (44%), Positives = 24/54 (44%)
 Frame = +2

Query: 17  GRGGDEQPKPLRGGRGGAALTVARTAAACSHTGGGRTGGGGTGGGRHAHVRAGA 178
           G GG        GG GGA    A  AAA    GGG  GGGG G    A   AGA
Sbjct: 439 GGGGGNGGGNGGGGGGGAGALAAALAAA--GAGGGLGGGGGGGALAAALAAAGA 490

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 18/34 (52%), Positives = 20/34 (57%)
 Frame = +2

Query: 53  GGRGGAALTVARTAAACSHTGGGRTGGGGTGGGR 154
           GG GG+A   A  AAA +  GGG  GG G  GGR
Sbjct: 277 GGYGGSAAAAA--AAAAAAAGGGGLGGVGFYGGR 308

 Score = 30.4 bits (67), Expect = 8.3
 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 34/82 (41%)
 Frame = +2

Query: 8   RRRGRGGDEQPK---------PLRGGRGGAALTVARTAAACSH----------------- 109
           R RGRGGD                   GG+A  VA  AAA +                  
Sbjct: 602 RGRGRGGDGDGNGASAVAAAAAAAAAAGGSAADVAAAAAAAAAMYGDGADGPDFDNGFGG 661

Query: 110 --------TGGGRTGGGGTGGG 151
                   +GGG +GGGG+GGG
Sbjct: 662 GNGNGGGGSGGGGSGGGGSGGG 683

>emb|CAD70966.1| probable Cytokinesis protein sepA [Neurospora crassa]
          Length = 1790

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = -1

Query: 180  AAPARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAA-----------PPRPPRSGLGC 34
            +APA      PPP PPPP  PPP +L  A   A +  A           PP PP  GL  
Sbjct: 1022 SAPAAASGPPPPPPPPPPPPPPPGFLPGAP--APIPGAGGPPPPPPPPPPPPPPPGGLPG 1079

Query: 33   SSPPRP 16
            ++PP P
Sbjct: 1080 AAPPMP 1085

 Score = 38.5 bits (88), Expect = 0.030
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = -1

Query: 150  PPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPP 52
            PPP PPPP  PPP  L  AA     +  PP PP
Sbjct: 1062 PPPPPPPPPPPPPGGLPGAAPPMPGAGGPPPPP 1094

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 21/54 (38%), Positives = 21/54 (38%)
 Frame = -1

Query: 177  APARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            AP       PPP PPPP  PPP             AAPP P   G     PP P
Sbjct: 1052 APIPGAGGPPPPPPPPPPPPPP-------PGGLPGAAPPMPGAGGPPPPPPPPP 1098

>dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (japonica
            cultivar-group)]
          Length = 1627

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
 Frame = -1

Query: 150  PPPVP--------PPPVRPPPVWLQAAAVRATVSAAPPRPP--RSGLGCSSPPRP 16
            PPP P        PPP  PPP+    A  R  V   PP PP  RSG+G ++PP P
Sbjct: 865  PPPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAP 919

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 23/45 (51%), Positives = 24/45 (53%)
 Frame = -1

Query: 150  PPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            PPP PPPP  PPP    A + RA  SA PP PP   L    PP P
Sbjct: 951  PPPPPPPPPPPPP---SAPSSRAFSSAPPPPPPPPLLRSVPPPPP 992

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -1

Query: 153  RPPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSS----PPRP 16
            +PPP PPPP  PPP    A++  +++   PP PP    G  +    PP P
Sbjct: 852  QPPPPPPPPPLPPPPPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPP 901

 Score = 38.5 bits (88), Expect = 0.030
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = -1

Query: 150  PPPVPPPPVR----PPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            PPP PPPP+     PPP  L AA  R      PP PP +      PP P
Sbjct: 988  PPPPPPPPISHSNAPPPPPLPAA--RFNAPPPPPPPPTTHFNAPPPPPP 1034

 Score = 37.4 bits (85), Expect = 0.068
 Identities = 20/45 (44%), Positives = 23/45 (50%)
 Frame = -1

Query: 150  PPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            PPP PPP  RP    L     RA+ +  PP PP + LG   PP P
Sbjct: 1079 PPPPPPPGGRPSAPPLPPPGGRAS-APPPPPPPSTRLGAPPPPPP 1122

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 22/52 (42%), Positives = 27/52 (51%)
 Frame = -1

Query: 171  ARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            A+T  + PPP PPPP   PP   ++     T  A PP P RS +   SPP P
Sbjct: 891  AQTRTFVPPPPPPPP---PP---RSGVGGNTPPAPPPPPLRSTVPAISPPPP 936

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 18/72 (25%)
 Frame = -1

Query: 177  APARTCAWRPPPVPPPP----------VRPPPVWLQAAAVRATVSA--------APPRPP 52
            A  RT    PPP PPPP            PPP       +R+TV A         PP  P
Sbjct: 891  AQTRTFVPPPPPPPPPPRSGVGGNTPPAPPPP------PLRSTVPAISPPPPPPPPPLKP 944

Query: 51   RSGLGCSSPPRP 16
             SG  C  PP P
Sbjct: 945  SSGAPCPPPPPP 956

 Score = 34.7 bits (78), Expect = 0.44
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -1

Query: 180  AAPARTCAWRPPPVPPPP----VRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            A  +R  +  PPP PPPP    V PPP          + S APP PP      ++PP P
Sbjct: 965  APSSRAFSSAPPPPPPPPLLRSVPPPP-----PPPPISHSNAPPPPPLPAARFNAPPPP 1018

 Score = 34.3 bits (77), Expect = 0.57
 Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -1

Query: 150  PPPVPPPPVR---PPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            PPP PPP  R   PPP     A  RA     PP PP  G     PP P
Sbjct: 1104 PPPPPPPSTRLGAPPPPPPPGAGGRA-----PPPPPAPGGRLGGPPPP 1146

 Score = 33.5 bits (75), Expect = 0.98
 Identities = 20/53 (37%), Positives = 21/53 (38%)
 Frame = -1

Query: 174  PARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            P  T +  PP  PPPP  PPP     A         PP PP  G     PP P
Sbjct: 1035 PPITRSGAPPSPPPPPSPPPPPPPPGAR-----PGPPPPPPPPGARPGPPPPP 1082

 Score = 33.5 bits (75), Expect = 0.98
 Identities = 24/62 (38%), Positives = 25/62 (39%), Gaps = 7/62 (11%)
 Frame = -1

Query: 171  ARTCAWRPPPVPP-------PPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRPR 13
            AR  A  PPP PP       PP  PPP+         T S APP PP        PP P 
Sbjct: 1010 ARFNAPPPPPPPPTTHFNAPPPPPPPPI---------TRSGAPPSPPPPPSPPPPPPPPG 1060

Query: 12   RR 7
             R
Sbjct: 1061 AR 1062

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 15/56 (26%)
 Frame = -1

Query: 138 PPPPVRPPPVWLQAAAVRATVSAA---------------PPRPPRSGLGCSSPPRP 16
           PPPP  PPP +  ++++   + +A               PP PP +  G SS P P
Sbjct: 825 PPPPPPPPPPYASSSSLSMHMGSATKQQPPPPPPPPPLPPPPPPPASSGLSSIPPP 880

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 21/57 (36%), Positives = 23/57 (39%), Gaps = 3/57 (5%)
 Frame = -1

Query: 174  PARTCAWRPPPVPPPPV---RPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRPR 13
            P  T    PPP PPP      PPP      A    +   PP PP  G    +PP PR
Sbjct: 1109 PPSTRLGAPPPPPPPGAGGRAPPP----PPAPGGRLGGPPPPPPPGG---RAPPPPR 1158

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 19/55 (34%), Positives = 22/55 (39%), Gaps = 10/55 (18%)
 Frame = -1

Query: 150  PPPVPP-----PPVRPPPVWLQAAAVRATV-----SAAPPRPPRSGLGCSSPPRP 16
            PPP PP     PP  PPP   +              +APP PP  G   + PP P
Sbjct: 1054 PPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPP 1108

>ref|XP_327870.1| hypothetical protein [Neurospora crassa] gi|28917030|gb|EAA26755.1|
            hypothetical protein [Neurospora crassa]
          Length = 1817

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = -1

Query: 180  AAPARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAA-----------PPRPPRSGLGC 34
            +APA      PPP PPPP  PPP +L  A   A +  A           PP PP  GL  
Sbjct: 1022 SAPAAASGPPPPPPPPPPPPPPPGFLPGAP--APIPGAGGPPPPPPPPPPPPPPPGGLPG 1079

Query: 33   SSPPRP 16
            ++PP P
Sbjct: 1080 AAPPMP 1085

 Score = 39.3 bits (90), Expect = 0.018
 Identities = 21/52 (40%), Positives = 23/52 (43%), Gaps = 7/52 (13%)
 Frame = -1

Query: 150  PPPVPPPPVRPPPVWLQAAAVRATVSAA-------PPRPPRSGLGCSSPPRP 16
            PPP PPPP  PPP  L  AA     +         PP PP  G+    PP P
Sbjct: 1062 PPPPPPPPPPPPPGGLPGAAPPMPGAGGPPPPPPPPPPPPMPGMAGMPPPPP 1113

 Score = 33.9 bits (76), Expect = 0.75
 Identities = 21/55 (38%), Positives = 23/55 (41%)
 Frame = -1

Query: 180  AAPARTCAWRPPPVPPPPVRPPPVWLQAAAVRATVSAAPPRPPRSGLGCSSPPRP 16
            AAP    A  PPP  PPP  PPP       +       PP PP  G+    PP P
Sbjct: 1080 AAPPMPGAGGPPP--PPPPPPPP---PMPGMAGMPPPPPPPPPMPGMPGMPPPPP 1129



EST assemble image


clone accession position
1 LCL094d10_r AV631459 1 166
2 LCL007h04_r AV626363 21 180




Chlamydomonas reinhardtii
Kazusa DNA Research Institute