KCC003066A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003066A_C01 KCC003066A_c01
gtatggcagtgccacgaggcttcaagtggagcggcggagtgcttgaccaagcgtacgaga
aaTGCGGGCAGGTCACCAGCGAGTATGCCAAGACTTTCTACCTGGGCACGCAGCTAATGA
CGCCAGCTCAGGCGAAGGCCGTTTGGGCGGTCTACGTTTGGTGCCGGCGAACTGACGAGC
TGGTGGACGGCCCGAACGCTTCCAAAATCACTCCGAAGGCACTAGACCGCTGGGAGGAGC
GGCTAGAGGCGCTCTTCGACGGAAAGCCCTACGACGAGCTCGATGCCGCGCTCACCGACA
CCGCGGCCAAGTTCCCCCTGCACATCCAGCCGTTCCGGGACATGATTGAGGGGATGCGCA
TGGACCTCGTAAAGTCTCGCTACGAGACGTTCGACGAGCTGTATGAGTACTGCTACCGCG
TCGCCGGGACGGTCGCGCTCATGTGCATGCCCATTATGGGTATCGAGCCCACTTACAAGG
GCCAGCTGGAGCCCGTGTACCGTGCTGCGCTGGCGCTGGGGACAGCCAACCAGCTGACCA
ACATCCTGCGCGATGTGGGCGAGGACGCCTACCAGCGCAATCGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003066A_C01 KCC003066A_c01
         (585 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T10702 phytoene synthase (EC 2.5.1.-) - green alga (Dunalie...   330  1e-89
gb|AAK15621.1|AF305430_1 phytoene synthase [Haematococcus pluvia...   321  5e-87
gb|AAG10427.1| phytoene synthase [Tagetes erecta]                     281  4e-75
emb|CAC27383.1| phytoene synthase [Helianthus annuus]                 278  5e-74
gb|AAK07735.1| phytoene synthase [Oryza sativa]                       278  5e-74

>pir||T10702 phytoene synthase (EC 2.5.1.-) - green alga (Dunaliella bardawil)
           gi|1916990|gb|AAB51287.1| phytoene synthase [Dunaliella
           bardawil]
          Length = 425

 Score =  330 bits (845), Expect = 1e-89
 Identities = 153/191 (80%), Positives = 171/191 (89%)
 Frame = +3

Query: 12  PRGFKWSGGVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDG 191
           PR  +W GG L+ AYE+CG V SEYAKTFYLGTQLMTP QA+ +WA+YVWCRRTDELVDG
Sbjct: 116 PRTLRWQGGSLEGAYERCGAVCSEYAKTFYLGTQLMTPVQARCIWAIYVWCRRTDELVDG 175

Query: 192 PNASKITPKALDRWEERLEALFDGKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLV 371
           PNASKITP+ALDRWEERLEA+F GKPYDELDAALTDT +K+PL IQPFRDMIEGMRMDL 
Sbjct: 176 PNASKITPQALDRWEERLEAMFQGKPYDELDAALTDTLSKYPLEIQPFRDMIEGMRMDLF 235

Query: 372 KSRYETFDELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILR 551
           KSRY TFDELYEYCYRVAGTV LM MP+MG++P+YKG ++ VYRAALALGTANQLTNILR
Sbjct: 236 KSRYYTFDELYEYCYRVAGTVGLMTMPVMGVDPSYKGPVDKVYRAALALGTANQLTNILR 295

Query: 552 DVGEDAYQRNR 584
           DVGED  +R+R
Sbjct: 296 DVGEDIRERDR 306

>gb|AAK15621.1|AF305430_1 phytoene synthase [Haematococcus pluvialis]
          Length = 389

 Score =  321 bits (822), Expect = 5e-87
 Identities = 147/187 (78%), Positives = 172/187 (91%)
 Frame = +3

Query: 24  KWSGGVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNAS 203
           +W+   L++AY++CGQVTSE+AKTFYLGTQLMTP QAK++WA+YVWCRRTDELVDGPNA+
Sbjct: 85  RWTPATLEEAYQRCGQVTSEFAKTFYLGTQLMTPIQAKSIWAIYVWCRRTDELVDGPNAN 144

Query: 204 KITPKALDRWEERLEALFDGKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRY 383
           KITPKALDRWEERLEA F G+PYD LDAAL+DT +KFP+ IQPF+DMIEGMRMDL K+RY
Sbjct: 145 KITPKALDRWEERLEATFAGRPYDVLDAALSDTISKFPMDIQPFKDMIEGMRMDLHKTRY 204

Query: 384 ETFDELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGE 563
           +TFDELYEYCYRVAGTV LM MP+MGI+P+YKG ++ VY+AALALGTANQLTNILRDVGE
Sbjct: 205 QTFDELYEYCYRVAGTVGLMTMPVMGIDPSYKGPMDVVYKAALALGTANQLTNILRDVGE 264

Query: 564 DAYQRNR 584
           DA +RNR
Sbjct: 265 DARERNR 271

>gb|AAG10427.1| phytoene synthase [Tagetes erecta]
          Length = 422

 Score =  281 bits (720), Expect = 4e-75
 Identities = 133/178 (74%), Positives = 152/178 (84%)
 Frame = +3

Query: 36  GVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNASKITP 215
           G+L +AY +CG+V +EYAKTFYLGT LMTP + KA+WA+YVWCRRTDELVDGPNAS ITP
Sbjct: 121 GLLSEAYNRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITP 180

Query: 216 KALDRWEERLEALFDGKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRYETFD 395
           KALDRWE RLE LF+G+P+D LDAAL+DT +KFP+ IQPF+DMIEGMRMDL KSRY+ FD
Sbjct: 181 KALDRWESRLEDLFNGRPFDMLDAALSDTVSKFPVDIQPFKDMIEGMRMDLRKSRYQNFD 240

Query: 396 ELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGEDA 569
           ELY YCY VAGTV LM +PIMGI+P  +   E VY AALALG ANQLTNILRDVGEDA
Sbjct: 241 ELYLYCYYVAGTVGLMSVPIMGIDPESQATTESVYNAALALGIANQLTNILRDVGEDA 298

>emb|CAC27383.1| phytoene synthase [Helianthus annuus]
          Length = 414

 Score =  278 bits (710), Expect = 5e-74
 Identities = 132/178 (74%), Positives = 151/178 (84%)
 Frame = +3

Query: 36  GVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNASKITP 215
           G+L++AY++CG+V +EYAKTFYLGT LMTP + KA+WA+YVWCRRTDELVDGPNAS ITP
Sbjct: 117 GLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 176

Query: 216 KALDRWEERLEALFDGKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRYETFD 395
           KALDRWE RLE LF+G+P+D L AAL+DT +KFP+ IQPF+DMI+GMRMDL KSRYE FD
Sbjct: 177 KALDRWESRLEDLFNGRPFDMLGAALSDTVSKFPVDIQPFKDMIDGMRMDLRKSRYENFD 236

Query: 396 ELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGEDA 569
           ELY YCY VAGTV LM +PIMGI P      E VY AALALG ANQLTNILRDVGEDA
Sbjct: 237 ELYLYCYYVAGTVGLMSVPIMGIAPESNAPTESVYNAALALGIANQLTNILRDVGEDA 294

>gb|AAK07735.1| phytoene synthase [Oryza sativa]
          Length = 404

 Score =  278 bits (710), Expect = 5e-74
 Identities = 132/179 (73%), Positives = 151/179 (83%)
 Frame = +3

Query: 33  GGVLDQAYEKCGQVTSEYAKTFYLGTQLMTPAQAKAVWAVYVWCRRTDELVDGPNASKIT 212
           G +L  AY +CG+V +EYAKTFYLGTQLMTP + KAVWA+YVWCRRTDELVDGPN+S IT
Sbjct: 114 GLLLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYIT 173

Query: 213 PKALDRWEERLEALFDGKPYDELDAALTDTAAKFPLHIQPFRDMIEGMRMDLVKSRYETF 392
           PKALDRWE+RLE LF+G+PYD  DAAL+DT +KFP+ IQPF+DMIEGMR+DL KSRY +F
Sbjct: 174 PKALDRWEKRLEDLFEGRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRYRSF 233

Query: 393 DELYEYCYRVAGTVALMCMPIMGIEPTYKGQLEPVYRAALALGTANQLTNILRDVGEDA 569
           DELY YCY VAGTV LM +P+MGI P  K   E VY AALALG ANQLTNILRDVGED+
Sbjct: 234 DELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDS 292



EST assemble image


clone accession position
1 LCL042c06_r AV628463 1 488
2 LCL007b10_r AV626336 63 585




Chlamydomonas reinhardtii
Kazusa DNA Research Institute