KCC003065A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003065A_C01 KCC003065A_c01
cagggccgggcgctgcaactgttcctgaccgcggtgcAGCAGGGCCACTTTCGCCAGGAG
CCGGTGGTGCGGCGGGCGGGACGCGTGGAGGTGAACCTGCACGCCATGACCGCGGGCGTG
GCCATGGTGTGCCTGTACTGCTGGCTGCTGGAGATCAAGCGTATTGCCGCAGAGAAGGGC
CTGGCGGGGCTCCCCCAGACGCTGGCGATCGTGACGGACATGGGCAAGGCCAGCCGAGAG
CAGGGGAACTGCATCGTGAAGGAGGCCGTGGCTGCCATGATGAGCTTCTGGGACGCGCCC
TTCAGGCTCGTGCAGGACGGCGCGTACGCGTCGGTGCTGGAGGCGACTTCGGCGCAGGTT
GTGGAATGGGTGACCAGCATGCCCTTCAGCGCGCAGCTGGCCAGCCTGTTCCCCATCACG
GACAGCAGCAAGATGACGGAGGACATGTACGCGGTGCGCGAGCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003065A_C01 KCC003065A_c01
         (465 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    69  2e-11
emb|CAC39318.1| VMP3 protein [Volvox carteri f. nagariensis]           67  1e-10
ref|NP_683012.1| serine/threonine protein kinase [Thermosynechoc...    64  6e-10
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    63  2e-09
emb|CAE03119.1| OSJNBa0067K08.27 [Oryza sativa (japonica cultiva...    62  2e-09

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 54/134 (40%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
 Frame = -3

Query: 373 SPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSP-ALGWP-----CPCPS 212
           +P P PAP + PAPT T  P     A P      P P  R  SP A G P      P P+
Sbjct: 221 APTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPT 280

Query: 211 RSPASGGAPPGPSLRQYA*SPAASSTGTPWP--RPRSWRAGSPPRVPPAAPPAPGESG-- 44
            +PA GG    PS R    S  A    TP P   P    A +PP   P A P PG  G  
Sbjct: 281 TTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGT 340

Query: 43  -PA-APRSGTVAAP 8
            PA AP +GT AAP
Sbjct: 341 PPAGAPAAGTPAAP 354

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 49/137 (35%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
 Frame = -3

Query: 400 PAAR*RACWSPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQP-RPPSRCSSPA-LGWP 227
           PAAR        P P P  PP      RP  A  A P   +  P  P +R  SPA    P
Sbjct: 169 PAAR--------PTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATP 220

Query: 226 CPCPSRSPASGGAP---PGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAP 56
            P P+ +P +  AP   P P       +P A   G P   P   R GSPP     +PPAP
Sbjct: 221 APTPTPAPTATPAPTATPAPGS-----TPGAPPAGRPGAPPPGVRPGSPPAA--GSPPAP 273

Query: 55  GESGPAAPRSGTVAAPG 5
           G    A P   T  APG
Sbjct: 274 G----ATPAPTTTPAPG 286

 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 42/122 (34%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 PQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAP 185
           PQ AP  PP P    RP              P PP    +     P P P+ +P     P
Sbjct: 159 PQHAPPPPPPP--AARPT-------------PTPPPPPPAGPAARPTPAPTATPTPVAPP 203

Query: 184 P-GPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAAP 8
           P  P+ R  + +PAA+   TP P P +  A       P A PAPG S P AP +G   AP
Sbjct: 204 PAAPTARPGSPAPAATPAPTPTPAPTATPA-------PTATPAPG-STPGAPPAGRPGAP 255

Query: 7   GP 2
            P
Sbjct: 256 PP 257

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 42/141 (29%), Positives = 54/141 (37%), Gaps = 18/141 (12%)
 Frame = -3

Query: 370 PIPQPAPKSPPA-----------PTRTRRPARA*RARPRSSSWQPRPPS-RCSSPALGWP 227
           P   P P  PPA           P   ++P+    A P+  +  P PP+   + PA   P
Sbjct: 92  PAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPP 151

Query: 226 CPCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAA------P 65
            P P+ +P     PP P        PAA  T TP P P +  A  P   P A       P
Sbjct: 152 APPPAAAPQHAPPPPPP--------PAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPP 203

Query: 64  PAPGESGPAAPRSGTVAAPGP 2
           PA   + P +P      AP P
Sbjct: 204 PAAPTARPGSPAPAATPAPTP 224

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 49/175 (28%), Positives = 62/175 (35%), Gaps = 24/175 (13%)
 Frame = -3

Query: 454 PRTCPPSSCCCP*WGTGWPAAR*RACWSPIPQPAPKSPPAPTRT-RRPARA*RARPRSSS 278
           P   PP +   P      PAA       P  +PAP  PP P    ++P+    A P+  +
Sbjct: 79  PPAAPPPAAAPP-----RPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHA 133

Query: 277 WQPRPPSR-CSSPALGWPCPCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWR 101
             P PP+   + PA   P P P+ +P     PP P        PAA  T TP P P +  
Sbjct: 134 PTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPP--------PAARPTPTPPPPPPAGP 185

Query: 100 AGSPPRVP----------------------PAAPPAPGESGPAAPRSGTVAAPGP 2
           A  P   P                      PAA PAP  +          A P P
Sbjct: 186 AARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAP 240

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 43/130 (33%), Positives = 52/130 (39%), Gaps = 9/130 (6%)
 Frame = -3

Query: 364 PQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAP 185
           P+  PK PP       PAR   A P  ++  P PP+   +P    P   P R  A    P
Sbjct: 48  PKQPPKGPPGAAPPAAPARP--AAPPPAAAPPHPPA---APP---PAAAPPRPAAPPPPP 99

Query: 184 PGPSLRQY----A*SPAASSTGTPWP--RPRSWRAGSPPRVPPAAPPAPGESGP---AAP 32
           P P+ R         PAA    +P P   P+      PP  PPAA PAP    P   AAP
Sbjct: 100 PPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAP 159

Query: 31  RSGTVAAPGP 2
           +      P P
Sbjct: 160 QHAPPPPPPP 169

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 49/154 (31%), Positives = 60/154 (38%), Gaps = 17/154 (11%)
 Frame = -3

Query: 412 GTGWPAAR*RACWSP---IPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSP 242
           G   PAA  R    P    P   P +PP      RPA    A P      P PP   + P
Sbjct: 57  GAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPA----APP------PPPPPPAARP 106

Query: 241 ALGWPCPCPSRSPASGGAPPGPSLRQYA*SP-------AASSTGTPWPRPRSWRAGSPPR 83
           A   P P P  +P     PP  + +Q+A +P       A  +   P P P +    +PP 
Sbjct: 107 APP-PPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPP 165

Query: 82  VPPAA------PPAPGESGPAA-PRSGTVAAPGP 2
            PP A      PP P  +GPAA P     A P P
Sbjct: 166 PPPPAARPTPTPPPPPPAGPAARPTPAPTATPTP 199

 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 46/148 (31%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
 Frame = -3

Query: 457 APRTCP-PSSCCCP*WGTGWPAAR*RACWSPIPQPAP-KSPPAPTRTRRPARA*RARPRS 284
           AP T P P     P  G   PA+           PAP  + PAPT T  P  A    P  
Sbjct: 278 APTTTPAPGGTATPPSGRPGPAST----------PAPGAATPAPTATPAPGGALTPPPGR 327

Query: 283 SSWQPRPPSRCSSPALGWPCP-CPSRSPASGGAPPGPSLRQYA*SPA---ASSTGTPWPR 116
               P P  +  +P  G P    P+  P +GG P  P+    A +P+    S+  TP P 
Sbjct: 328 PGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAAPAGAAAPSTVPGSAAATPPPN 387

Query: 115 PRSWRAGSPPRVPPAAPPAPGESGPAAP 32
              +   +PP V PA   AP    P  P
Sbjct: 388 RAQF---APPTVTPAFQAAPTVVAPLPP 412

 Score = 31.6 bits (70), Expect = 4.6
 Identities = 17/42 (40%), Positives = 19/42 (44%)
 Frame = -3

Query: 127 PWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAAPGP 2
           P  +P+    G P   PPAAP  P    PAA      AAP P
Sbjct: 44  PDGKPKQPPKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPP 85

>emb|CAC39318.1| VMP3 protein [Volvox carteri f. nagariensis]
          Length = 687

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 43/117 (36%), Positives = 50/117 (41%), Gaps = 4/117 (3%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSR----SP 203
           P P P+P+ PP+P     P R    RP      PRPP R SSP    P P P      SP
Sbjct: 500 PTPPPSPRPPPSPRPPNPPPRPPSPRP-----PPRPPPRPSSPRPPPPDPSPPPPSPPSP 554

Query: 202 ASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAP 32
            +  +PP P+      SP   S   P P P S     PP  PP +PP P    P  P
Sbjct: 555 PTSPSPPDPAWANLPTSPDPPSPNPPSPDPPS---PDPPSAPPPSPPPPSPPPPNPP 608

 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 36/115 (31%), Positives = 41/115 (35%)
 Frame = -3

Query: 352 PKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAPPGPS 173
           P +PP+P             P  S   PRPP     P    P P P  SP     PP P 
Sbjct: 476 PSAPPSP-------------PPPSPPPPRPPPPSPVPPTPPPSPRPPPSPRPPNPPPRP- 521

Query: 172 LRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAAP 8
                  P+      P PRP S      PR PP  P  P  S P+ P S +   P
Sbjct: 522 -------PSPRPPPRPPPRPSS------PRPPPPDPSPPPPSPPSPPTSPSPPDP 563

 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 39/112 (34%), Positives = 43/112 (37%), Gaps = 1/112 (0%)
 Frame = -3

Query: 364 PQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAP 185
           P P P SPP P    RP       P  S   P PP          P P P  SP     P
Sbjct: 480 PSPPPPSPPPP----RP-------PPPSPVPPTPP----------PSPRPPPSPRPPNPP 518

Query: 184 PGPSLRQYA*SPAASSTGTPWPRPRSWRAGSP-PRVPPAAPPAPGESGPAAP 32
           P P        P+      P PRP S R   P P  PP +PP+P  S P+ P
Sbjct: 519 PRP--------PSPRPPPRPPPRPSSPRPPPPDPSPPPPSPPSPPTS-PSPP 561

 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 36/121 (29%), Positives = 44/121 (35%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGG 191
           P P P    PP+P     P  +    P  S   P PP     P    P P P   P    
Sbjct: 575 PSPNPPSPDPPSPDPPSAPPPS---PPPPSPPPPNPPPPSPPP----PNPPPPSPPPPSP 627

Query: 190 APPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAA 11
            PP P       +P   S   P PRP +    SPP  PP  PP P  +  + P + +   
Sbjct: 628 PPPSPP----PPNPPPPSPPPPSPRPPTPPPPSPP--PPRPPPRPPPTRRSPPPTSSPPP 681

Query: 10  P 8
           P
Sbjct: 682 P 682

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 40/138 (28%), Positives = 47/138 (33%), Gaps = 15/138 (10%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRP-----------PSRCSSPALGWPC 224
           P P P P SPP+P  +  P     A   +S   P P           P     P+   P 
Sbjct: 542 PDPSPPPPSPPSPPTSPSPPDPAWANLPTSPDPPSPNPPSPDPPSPDPPSAPPPSPPPPS 601

Query: 223 PCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPP----RVPPAAPPAP 56
           P P   P     PP P       SP   S   P P P +    SPP    R P   PP+P
Sbjct: 602 PPPPNPPPPSPPPPNPPPP----SPPPPSPPPPSPPPPNPPPPSPPPPSPRPPTPPPPSP 657

Query: 55  GESGPAAPRSGTVAAPGP 2
               P      T  +P P
Sbjct: 658 PPPRPPPRPPPTRRSPPP 675

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 34/105 (32%), Positives = 38/105 (35%)
 Frame = -3

Query: 373 SPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASG 194
           SP P P+P  P AP  +  P       P   S  P  P   S P    P P P       
Sbjct: 581 SPDP-PSPDPPSAPPPSPPPPSPPPPNPPPPSPPPPNPPPPSPPPPSPPPPSPPPPNPPP 639

Query: 193 GAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPA 59
            +PP PS R     P +     P PRP   R   PP   P  P A
Sbjct: 640 PSPPPPSPRPPTPPPPSPPPPRPPPRPPPTRRSPPPTSSPPPPVA 684

>ref|NP_683012.1| serine/threonine protein kinase [Thermosynechococcus elongatus
           BP-1] gi|22295949|dbj|BAC09774.1| serine/threonine
           protein kinase [Thermosynechococcus elongatus BP-1]
          Length = 488

 Score = 64.3 bits (155), Expect = 6e-10
 Identities = 41/113 (36%), Positives = 48/113 (42%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGG 191
           P P PAP+  P+P  T  PA    A   +S  QP PP   S P+   P P P  S +S  
Sbjct: 379 PTPNPAPEPTPSPESTE-PATPSPAPQEASPPQPTPPPSSSEPSNATPSPEPGVSQSS-- 435

Query: 190 APPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAP 32
            PP P        P + +  TP P   S     PP  PP   P P  S PA P
Sbjct: 436 PPPAPVESPVPTPPPSPAAETPPPPTNSQPTSEPPTPPPQPTPPPSSSEPATP 488

 Score = 38.1 bits (87), Expect = 0.050
 Identities = 32/116 (27%), Positives = 39/116 (33%)
 Frame = -3

Query: 349 KSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAPPGPSL 170
           ++ P  T T  P R     P+   + P  P R   P    P P P+ +PA    P   S 
Sbjct: 341 RNQPVDTVTPPPPR-----PQEQEFPPTLP-RVVPPVEVTPSPEPTPNPAPEPTPSPEST 394

Query: 169 RQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAAPGP 2
                SPA      P P P    +      P   P     S P AP    V  P P
Sbjct: 395 EPATPSPAPQEASPPQPTPPPSSSEPSNATPSPEPGVSQSSPPPAPVESPVPTPPP 450

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 49/125 (39%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
 Frame = -3

Query: 364 PQPAPKSP----PAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPAS 197
           P PAP SP    PAP     P+ A  +    S   P PP    SPA   P P PS +P S
Sbjct: 41  PSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPP----SPAPPSPAP-PSPAPPS 95

Query: 196 GGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTV 17
             APP P+      SPA  S   P P P S  + +PP   P APP+P    PA P   + 
Sbjct: 96  -PAPPSPA----PPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSP 150

Query: 16  AAPGP 2
           A P P
Sbjct: 151 APPSP 155

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 46/129 (35%), Positives = 55/129 (41%), Gaps = 8/129 (6%)
 Frame = -3

Query: 364 PQPAPKSP----PAPTRTRRPARA*RARPRSSSWQPRPPSRCS----SPALGWPCPCPSR 209
           P PAP SP    PAP     P+ A  + P  +   P PP+  S    SPA   P P P+ 
Sbjct: 94  PSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLP-PSPAP 152

Query: 208 SPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPR 29
              S   PP PS      SPA  S   P P P    + +PP   P  PP+P    PA P 
Sbjct: 153 PSPSPPVPPSPS-PPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPV 211

Query: 28  SGTVAAPGP 2
             + A P P
Sbjct: 212 PPSPAPPSP 220

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 44/134 (32%), Positives = 55/134 (40%), Gaps = 11/134 (8%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCS-------SPALGWPCPCPS 212
           P P P   SPPAP     P+ A    P  +   P PP   S       SPA   P P PS
Sbjct: 122 PSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTP-PS 180

Query: 211 RSPASGGAP----PGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESG 44
            SP    +P    P P +      P+ +    P P P S  + +PP  P  APP+P    
Sbjct: 181 PSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPA 240

Query: 43  PAAPRSGTVAAPGP 2
           P +P   + A P P
Sbjct: 241 PPSPVPPSPAPPSP 254

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 38/121 (31%), Positives = 48/121 (39%)
 Frame = -3

Query: 364 PQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAP 185
           P P P +PP P     P       P ++   P PPS   SPA   P   PS SP S   P
Sbjct: 257 PSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPS-PVP 315

Query: 184 PGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAAPG 5
           P P       +P   S   P P P    + +PP   P+  P+P  S   +P      +P 
Sbjct: 316 PSP-------APVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPS 368

Query: 4   P 2
           P
Sbjct: 369 P 369

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 45/123 (36%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGG 191
           P P P   SPP P     P     A P  +   P PP     P+   P P P   P+   
Sbjct: 148 PSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPV---PPSPAPPSPAPPVPPSPAP 204

Query: 190 APPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPRSGTVAA 11
             P P +      P+  S   P P   +  + SPP  P   PP+P    PA P     A 
Sbjct: 205 PSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAP 264

Query: 10  PGP 2
           P P
Sbjct: 265 PPP 267

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 48/154 (31%), Positives = 58/154 (37%), Gaps = 2/154 (1%)
 Frame = -3

Query: 457 APRTCPPSSCCCP*WGTGWPAAR*RACWSPIPQPAPKSPPAPTRTRRPARA*RARPRSSS 278
           AP +  P S   P  G   PA       +P P PAP SP  P+    PA    A P  + 
Sbjct: 54  APPSPAPPSPAPPSPGPPSPAPPSPPSPAP-PSPAPPSPAPPS----PAPPSPAPPSPAP 108

Query: 277 WQPRPPSRC--SSPALGWPCPCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSW 104
             P PPS    S P+   P P P   P+     P P L      P+ S    P P P   
Sbjct: 109 PSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVP 168

Query: 103 RAGSPPRVPPAAPPAPGESGPAAPRSGTVAAPGP 2
            + +PP   P +P  P    PA P       P P
Sbjct: 169 PSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSP 202

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 44/139 (31%), Positives = 51/139 (36%), Gaps = 16/139 (11%)
 Frame = -3

Query: 370 PIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGG 191
           P P P   SPP P     P+ A    P  +   P PP   S      P P P   P+   
Sbjct: 174 PSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSP-- 231

Query: 190 APPGPSL----RQYA*SPAASSTGTPWPRPRS-WRAGSPPRVPPAAPPAPGES------- 47
           APP PS          SPA  S   P P+P +     SPP  PP  PP P  +       
Sbjct: 232 APPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPP 291

Query: 46  ----GPAAPRSGTVAAPGP 2
                PA P   T  +P P
Sbjct: 292 SPPPSPAPPTPPTPPSPSP 310

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
 Frame = -3

Query: 373 SPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASG 194
           SP P PAP +PP P             P  S   P PPS    P    P P P+ SP   
Sbjct: 292 SPPPSPAPPTPPTP-------------PSPSPPSPVPPSPAPVPPSPAP-PSPAPSPPPS 337

Query: 193 GAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVP-PAAPPAP 56
            APP PS      SP+ S + +P P P    + SP  +P P+  P+P
Sbjct: 338 PAPPTPSP-----SPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSP 379

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 48/131 (36%), Positives = 53/131 (39%), Gaps = 10/131 (7%)
 Frame = -3

Query: 364 PQPAPKSP----PAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPAS 197
           P PAP SP    P+P     PA    A P   S  P  P+    P+   P P PS +P S
Sbjct: 169 PSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSP-PSPAPPS 227

Query: 196 --GGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVPPAAPPAPGESGPAAPR-- 29
               APP PS       PA  S   P P P S    SP   PPA PP P    P  PR  
Sbjct: 228 PPSPAPPSPS------PPAPPSPVPPSPAPPSPAPPSPK--PPAPPPPPSPPPPPPPRPP 279

Query: 28  --SGTVAAPGP 2
             + T   P P
Sbjct: 280 FPANTPMPPSP 290

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 40/135 (29%), Positives = 51/135 (37%), Gaps = 11/135 (8%)
 Frame = -3

Query: 373 SPIPQPAPK---------SPPAPTRTRRPARA*RARPRSSSWQPRPPSRC-SSPALGWPC 224
           SP P   P          +PP+P     P+ +  A P      P PPS    SP    P 
Sbjct: 206 SPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPP 265

Query: 223 PCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPR-VPPAAPPAPGES 47
           P PS  P     PP P+      SP +       P P +  + SPP  VPP+  P P   
Sbjct: 266 PPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSP 325

Query: 46  GPAAPRSGTVAAPGP 2
            P +P      +P P
Sbjct: 326 APPSPAPSPPPSPAP 340

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 35/110 (31%), Positives = 43/110 (38%), Gaps = 4/110 (3%)
 Frame = -3

Query: 364 PQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRPPSRCSSPALGWPCPCP---SRSPASG 194
           P P P  PP P  T  P       P  +   P  P   S P+   P P P   S +P S 
Sbjct: 271 PPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSP 330

Query: 193 GAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSPPRVP-PAAPPAPGES 47
              P PS      SP+ S + +P P P    + SP   P P+  P P  S
Sbjct: 331 APSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSPS 380

 Score = 34.7 bits (78), Expect = 0.55
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -3

Query: 373 SPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRP---PSRCSSPALGWPCPCPSRSP 203
           SP P P   +PP+P  +  P+ A      S S  P P   PS   SP+   P P PS SP
Sbjct: 317 SPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPS-PSPIPSPSP 375

Query: 202 ASGGAP 185
               +P
Sbjct: 376 KPSPSP 381

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 14/76 (18%)
 Frame = -3

Query: 373 SPIPQPAPKSPPAPTRTR----------RPARA*RARPRSSSWQPRPP----SRCSSPAL 236
           SPIP P+PK  P+P   +                  RP S+S     P    ++C     
Sbjct: 368 SPIPSPSPKPSPSPVAVKLVWADDAIAFDDLNGTSTRPGSASRMVGEPDIAGTKCKGNLK 427

Query: 235 GWPCPCPSRSPASGGA 188
           GW  P PSR+P  G A
Sbjct: 428 GW-MPKPSRNPRWGQA 442

>emb|CAE03119.1| OSJNBa0067K08.27 [Oryza sativa (japonica cultivar-group)]
          Length = 508

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 51/156 (32%), Positives = 69/156 (43%), Gaps = 9/156 (5%)
 Frame = -3

Query: 442 PPSSCCCP*WGTGWPAAR*RACWSPIPQPAPKSPPAPTRTRRPARA*RARPRSSSWQPRP 263
           PPSS   P   +  PAAR          P+ ++PP P     PA+A      +SS  PR 
Sbjct: 39  PPSSSPAPAASSATPAAR---------APSQRTPPTPAT---PAKAASPPATNSSSSPRT 86

Query: 262 PSRCSSPALGWPCPCPSRSPASGGAPPGPSLRQY-A*SPAASSTGTPWPRPRSWRAGSPP 86
           P+   +P    P P  S +P    +PP P      A SP+ + +  P P+P S    + P
Sbjct: 87  PA-APAPRPPQPPPATSPAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSPPPAATP 145

Query: 85  RV----PPAAPPAPGESGPAAPRS----GTVAAPGP 2
                 PP++PPAP  S P  PR+       AAP P
Sbjct: 146 TTKPSPPPSSPPAPRPSPPLPPRTPPPPPPAAAPKP 181

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 54/170 (31%), Positives = 68/170 (39%), Gaps = 16/170 (9%)
 Frame = -3

Query: 463 ARAPRTCPPSSCCCP*WGTGWPAAR*----RACWSPIPQP---APKSPPAPTRTRRPARA 305
           ARAP    P +   P      PA       R   +P P+P    P + PAPT+   P   
Sbjct: 55  ARAPSQRTPPTPATPAKAASPPATNSSSSPRTPAAPAPRPPQPPPATSPAPTKPSSPP-- 112

Query: 304 *RARPRSSSWQPRPPSRCSSPALGWPCPCPSRSPASGGAPPGPSLRQYA*SPAASSTGTP 125
                      P+PPS         P P PS +P+S   PP P  +  +  PAA+ T  P
Sbjct: 113 ----------APKPPSP--------PAPSPSTTPSS---PPAP--KPSSPPPAATPTTKP 149

Query: 124 WPRPRSWRA---------GSPPRVPPAAPPAPGESGPAAPRSGTVAAPGP 2
            P P S  A          +PP  PPAA P P  S P AP + T  +  P
Sbjct: 150 SPPPSSPPAPRPSPPLPPRTPPPPPPAAAPKPSPSPPPAPTNSTTNSSSP 199

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 34/90 (37%), Positives = 48/90 (52%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268 RPPSRCSSPALGWPCPCPSRSPASGGAPPGPSLRQYA*SPAASSTGTPWPRPRSWRAGSP 89
           +PPS   +PA     P  +R+P S   PP P+    A SP A+++ +  PR  +  A  P
Sbjct: 38  QPPSSSPAPAASSATPA-ARAP-SQRTPPTPATPAKAASPPATNSSSS-PRTPAAPAPRP 94

Query: 88  PRVPPAAPPAPGE-SGPAAPRSGTVAAPGP 2
           P+ PPA  PAP + S P AP+  +  AP P
Sbjct: 95  PQPPPATSPAPTKPSSPPAPKPPSPPAPSP 124



EST assemble image


clone accession position
1 LCL009a02_r AV626435 1 465
2 LCL007b04_r AV626331 38 206




Chlamydomonas reinhardtii
Kazusa DNA Research Institute