KCC003062A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003062A_C01 KCC003062A_c01
CTGATACAGCCCACTTACTTGCCCCCACCTAAGGGCTTCTTCATCTGGTGGCGTCGCCGA
GCCGTGTTCGCAACAGCGGTTTTTTCAACCAGTCAAGGGAATACATTTCAATATCGAAGC
TGCAAAGCCGGCGTCCGCTGCTAGCCTGCGTCCAGCCGGCGTCCGCTGCTAGCCTCGTCT
GTGAGTCCGTGAGAGCGCTTCATCCGACCCAGTCAGCGGCCAAACTCGAGCCTGCTTTAC
TGCCGTTTGTCAACTTCGCAGGCAGCGTCATGACGGATGCGGAAGCGGCAGAGCTGGAGA
AGGAGGAGCGCTCCCGGACAACGCTGGTAGGGGGGTTGGATATGGACCAGCCGCTGGACG
AGGAGACTGTGAAATCTGCACTGCGCAAATTGGCGCTGCAAGAGGCAGCGATTAGGGTGC
AGAAAGCCAATATCGAGAAGGCGGCCGCCGAGGACAAGGCCAAGATCGAGAAGGCGGCCG
CCGAGGACAAGGCCTCGTCCGAGGCACGGAAGGCCAGGTTCGAGGAGGAAAAAGCCAAGA
TGGAGAAGGCGTTCGCCGAGGACAAGGCCTCGTCCGAGGCACGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003062A_C01 KCC003062A_c01
         (585 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S50755 hypothetical protein VSP-3 - Chlamydomonas reinhardt...    58  1e-07
pir||S21961 proline-rich protein APG - Arabidopsis thaliana gi|2...    57  2e-07
emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    56  3e-07
pir||S50754 hypothetical protein WP6 - Chlamydomonas eugametos g...    56  3e-07
sp|P40602|APG_ARATH Anter-specific proline-rich protein APG prec...    56  4e-07

>pir||S50755 hypothetical protein VSP-3 - Chlamydomonas reinhardtii
           gi|530876|gb|AAB53953.1| amino acid feature: Rod protein
           domain, aa 266 .. 468; amino acid feature: globular
           protein domain, aa 32 .. 265
          Length = 473

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSV-PRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLP 403
           P+  P P+ +PSPS    P   P   P   P P+  PS S P P+  PS     +P   P
Sbjct: 271 PKASPSPKVSPSPSPKASPSPSPKASPSPSPSPKASPSPS-PSPKASPSPSPSPSPSPSP 329

Query: 402 LAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            A+P  +   S S +PA+ P P+P P+ S S  PSP  PLP PS
Sbjct: 330 KASP--SPSPSPSVQPASKPSPSPSPSPSPSPRPSP--PLPSPS 369

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 40/99 (40%), Positives = 52/99 (52%)
 Frame = -1

Query: 567 PCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPI 388
           P P+ +PSPS    P+  PS     P P+  PS S P P+  PS     +P   P A+P 
Sbjct: 283 PSPKASPSPS----PKASPS---PSPSPKASPSPS-PSPKASPSPSPSPSPSPSPKASP- 333

Query: 387 CAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            +   S S +PA+ P P+P P+ S S  PSP LP P PS
Sbjct: 334 -SPSPSPSVQPASKPSPSPSPSPSPSPRPSPPLPSPSPS 371

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 38/106 (35%), Positives = 49/106 (45%), Gaps = 3/106 (2%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWL--FPPRTWPSV-PRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*S 409
           P   P P+ +PSPS      P + PS  P   P P   PS   P P   PS     +P  
Sbjct: 323 PSPSPSPKASPSPSPSPSVQPASKPSPSPSPSPSPSPRPSPPLPSPSPSPSPSPSPSPSP 382

Query: 408 LPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            P  +P  +   S SP+P+  P P+P P+ S    PSP+ P P PS
Sbjct: 383 SPKPSPSPSPSPSPSPKPSPSPSPSPSPSPSPKVSPSPS-PSPSPS 427

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRS-------WPCPRRPPSRYWLS 421
           P ++P P  +PSPS    PR  P +P   P P   PS S        P P   PS     
Sbjct: 343 PASKPSPSPSPSPSP--SPRPSPPLPSPSPSPSPSPSPSPSPSPKPSPSPSPSPSPSPKP 400

Query: 420 AP*SLPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPL 283
           +P   P  +P  + ++S SP P+  P P+P  + S +  PSP  P+
Sbjct: 401 SPSPSPSPSPSPSPKVSPSPSPSPSPSPSPKASPSPAKKPSPPPPV 446

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 34/95 (35%), Positives = 42/95 (43%), Gaps = 1/95 (1%)
 Frame = -1

Query: 552 TPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPICAVQI 373
           +PSPS           P+  P P+  PS   P P+  PS     +P + P  +P      
Sbjct: 266 SPSPS-----------PKASPSPKVSPS---PSPKASPS----PSPKASPSPSPSPKASP 307

Query: 372 SQSPRPAAGPYPTPLPALSGSAPPSP-ALPLPHPS 271
           S SP P A P P+P P    S  PSP A P P PS
Sbjct: 308 SPSPSPKASPSPSPSP----SPSPSPKASPSPSPS 338

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 23/58 (39%), Positives = 29/58 (49%), Gaps = 7/58 (12%)
 Frame = -1

Query: 423 SAP*SLPLAAPICAVQISQSPRPA------AGPYPTPLPALSGSAPPSP-ALPLPHPS 271
           ++P   P A+P   V  S SP+ +      A P P+P P  S S  PSP A P P PS
Sbjct: 265 ASPSPSPKASPSPKVSPSPSPKASPSPSPKASPSPSPSPKASPSPSPSPKASPSPSPS 322

>pir||S21961 proline-rich protein APG - Arabidopsis thaliana
           gi|22599|emb|CAA42925.1| APG [Arabidopsis thaliana]
          Length = 534

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 40/109 (36%), Positives = 44/109 (39%), Gaps = 6/109 (5%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSV-----PRTRPCPRRPPSRSWPCPRRPPSRYWLSAP 415
           P   PCP   P P    PP   PS      P+ +P P  PP+    CP  PP      AP
Sbjct: 83  PGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPA----CPPTPPKPQPKPAP 138

Query: 414 *SLPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPA-LPLPHPS 271
              P  AP  A +    P P   P PTP P      PP PA  P P PS
Sbjct: 139 PPAPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPS 187

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 34/102 (33%), Positives = 44/102 (42%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P   P P  + PP   P+ P+ +P P  PP+   P P  PP      AP  +P 
Sbjct: 105 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPA---PKPAPPP------APKPVPC 155

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
            +P      +  P P  GP P P PA + +  P PA   P P
Sbjct: 156 PSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKP 197

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 36/107 (33%), Positives = 44/107 (40%), Gaps = 5/107 (4%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSV-PRTRPCPRRPPSRS-WPCPRRPPSRYWLSAP*SL 406
           P  +P     PSP  + PP   P   P  +P P+ PP+ S  PCP  PP       P   
Sbjct: 65  PSPKPVAPPGPSPKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVP--- 121

Query: 405 PLAAPICAVQISQSPRPAAGPYPTPLPA---LSGSAPPSPALPLPHP 274
           P A P    +    P P   P P P PA   +   +PP P  P P P
Sbjct: 122 PPACPPTPPKPQPKPAPPPAPKPAPPPAPKPVPCPSPPKPPAPTPKP 168

 Score = 40.0 bits (92), Expect = 0.024
 Identities = 34/104 (32%), Positives = 41/104 (38%), Gaps = 8/104 (7%)
 Frame = -1

Query: 558 RRTPSPSWLFP-PRTWPSVPRT---RPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAP 391
           R  P P W  P P+ WP  P T    P P  PP  S P P  PP      +P   P   P
Sbjct: 41  RLWPWPLWPRPYPQPWPMNPPTPDPSPKPVAPPGPS-PKPVAPPGPSPCPSPPPKPQPKP 99

Query: 390 ICAVQISQSPRPAAG----PYPTPLPALSGSAPPSPALPLPHPS 271
                   +P P+      P P P P    + PP+P  P P P+
Sbjct: 100 ------PPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPA 137

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 44/107 (41%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVP-RTRPCPR----RPPSRSWPCPRRPPSRYWLSAP 415
           P   P PR  PSP    PP   PS P R  P P     RPPS S P PR PP R     P
Sbjct: 180 PPPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPP 239

Query: 414 *SLPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
              P   P        +P P   P P+P P L    PPSP  PLP P
Sbjct: 240 SPPPPRPP------PPAPPPPRPPPPSPPPPL--PPPPSPPPPLPPP 278

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 41/111 (36%), Positives = 45/111 (39%), Gaps = 7/111 (6%)
 Frame = -1

Query: 585 SVPRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPP--SRSWPCPRRPPSRYWLSAP* 412
           S P  RP PRR P P    PP   P  P   P P RPP  S   P P  P     L  P 
Sbjct: 223 SPPSPRPPPRRPPFPPPSPPP---PRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPP 279

Query: 411 SLPLAAPICAVQISQSPRPAA-----GPYPTPLPALSGSAPPSPALPLPHP 274
           S P  +P     +  SPRP        P+P P P      PP P  P P+P
Sbjct: 280 SPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPP--PNPPPPRPPPPSPNP 328

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 37/102 (36%), Positives = 41/102 (39%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P   P P    PP   P  P   P P  PPS     P  PP     S P S P 
Sbjct: 119 PPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPP 178

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
           + P      S  PRP   P P+P P+   S PP P  P P+P
Sbjct: 179 SPPP-----SPPPRPPPSPPPSPPPSPPPSPPPRPP-PSPNP 214

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 38/102 (37%), Positives = 41/102 (39%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P  +P PS   PP + P  P   P PR PPS   P P  PPS      P S P 
Sbjct: 158 PSPPPSPPPSPPPS---PPPSPPPSPPPSPPPRPPPS---PPPSPPPS-----PPPSPPP 206

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
             P      S  P   + P P P P      PPSP  P P P
Sbjct: 207 RPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPP 248

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 37/103 (35%), Positives = 41/103 (38%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P + P P   P P    PP   P  P   P P  PP    P P  PPS      P   P 
Sbjct: 108 PPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPS------PPPSPP 161

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            +P  +   S  P P   P P+P P    S PPSP  P P PS
Sbjct: 162 PSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPP-PSPPPS 203

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 37/103 (35%), Positives = 42/103 (39%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P   P PS   PP   P  P + P P  PP    P P  PP       P   P 
Sbjct: 97  PPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPP-------PPPPPS 149

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            +P  +   S  P P   P P+P P+   S PPSP  P P PS
Sbjct: 150 PSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPP-PRPPPS 191

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 36/103 (34%), Positives = 42/103 (39%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P  +P P    PP   PS P   P P  PP    P P  PP      +P   P 
Sbjct: 101 PPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPS---PSPPPSPP 157

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            +P  +   S  P P   P P+P P+     PPSP  P P PS
Sbjct: 158 PSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPP-PSPPPS 199

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 37/103 (35%), Positives = 43/103 (40%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P  +P P    PP   P  P   P P  PP    P P  PPS     +P   P 
Sbjct: 115 PPPPPPPPPSPPPP---PPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSP--PPSPPPSPP 169

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            +P  +   S  P P   P P+P P+   S PPSP  P P PS
Sbjct: 170 PSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPP-PRPPPS 211

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 40/108 (37%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P  +P PS   PP + P  P   P P  PPS     P  PP R   S P S P 
Sbjct: 142 PPPPPPPSPSPPPS---PPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPP 198

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPAL-----PLPHPS 271
           + P      S  PRP   P P P P     +PPSP       P P PS
Sbjct: 199 SPPP-----SPPPRPPPSPNP-PSPRPPSPSPPSPRPPPRRPPFPPPS 240

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 37/103 (35%), Positives = 40/103 (37%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P   P P    PP   PS P   P P  PP    P P  PP       P + P 
Sbjct: 90  PPPPPVPPPPPPPP---PPPPPPSPPPPPPPPPPPPPSPPPPPPPPP-----PPPPNPPP 141

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
             P      S  P P   P P+P P+   S PPSP  P P PS
Sbjct: 142 PPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPP-PSPPPS 183

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 35/98 (35%), Positives = 39/98 (39%)
 Frame = -1

Query: 567 PCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPI 388
           P P   P P    PP   P  P   P P  PP  S P P  PP     + P   P   P 
Sbjct: 90  PPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPS 149

Query: 387 CAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
            +   S  P P   P P+P P+   S PPSP  P P P
Sbjct: 150 PSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPP-PSPPP 186

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 37/105 (35%), Positives = 40/105 (37%)
 Frame = -1

Query: 585 SVPRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SL 406
           S P   P P   P PS   PP   P  P  RP    PP+   P PR PP       P   
Sbjct: 270 SPPPPLPPPPSPPPPS---PPPPSPLPPSPRPPKPSPPNN--PFPRPPPPN---PPPPRP 321

Query: 405 PLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
           P  +P        SP P   P P+P P       PSP  P P PS
Sbjct: 322 PPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPS 366

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 37/103 (35%), Positives = 40/103 (37%), Gaps = 1/103 (0%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRT-WPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLP 403
           P   P   R P PS   PP   +P  P   P P RPP  S P P RPP       P S P
Sbjct: 289 PSPLPPSPRPPKPS---PPNNPFPRPPPPNPPPPRPPPPS-PNPPRPP-------PPSPP 337

Query: 402 LAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
              P         P P+  P   P P+ S   PP P  P P P
Sbjct: 338 PPRP---------PPPSPNPPRPPPPSPSPPKPPPPPSPPPRP 371

 Score = 40.8 bits (94), Expect = 0.014
 Identities = 34/99 (34%), Positives = 34/99 (34%)
 Frame = -1

Query: 567 PCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPI 388
           P P   P P    PP   PS P   P P  PP    P P  PPS          P   P 
Sbjct: 69  PPPPPPPPPQPPLPPS--PSPPPPPPPPVPPPPPPPPPPPPPPS----------PPPPPP 116

Query: 387 CAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
                  SP P   P P P P      PP P  P P PS
Sbjct: 117 PPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPS 155

 Score = 40.8 bits (94), Expect = 0.014
 Identities = 35/102 (34%), Positives = 38/102 (36%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P T P     P+PS    P   P  P   P P  PPS S P P  PP    +  P   P 
Sbjct: 48  PGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPP----VPPPPPPPP 103

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
             P         P P+  P P P P    S PP P  P P P
Sbjct: 104 PPP---------PPPSPPPPPPPPPPPPPSPPPPPPPPPPPP 136

 Score = 39.7 bits (91), Expect = 0.031
 Identities = 37/106 (34%), Positives = 39/106 (35%), Gaps = 4/106 (3%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFP-PRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLP 403
           P   P P   P PS L P PR     P   P PR PP    P PR PP       P   P
Sbjct: 277 PPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNP-PPPRPPPPS---PNPPRPP 332

Query: 402 LAAPICAVQISQSPRPAAGPYPTPLPALSG---SAPPSPALPLPHP 274
             +P        SP P   P P+P P       S PP P    P P
Sbjct: 333 PPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRP 378

 Score = 38.9 bits (89), Expect = 0.053
 Identities = 34/96 (35%), Positives = 37/96 (38%)
 Frame = -1

Query: 561 PRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPICA 382
           P  TP P    PP T PS P   P P  PP    P P +PP       P   P   P   
Sbjct: 47  PPGTPPPG--VPPPT-PSGPEHPPPPPPPP----PPPPQPPL-----PPSPSPPPPPPPP 94

Query: 381 VQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
           V     P P   P P+P P      PP P+ P P P
Sbjct: 95  VPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPP 130

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -1

Query: 585 SVPRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPR---RPPSRSWPCPRRPPS 436
           S P  RP P   PSP+   PP   PS P+  P P    RPP R    PRRPP+
Sbjct: 335 SPPPPRPPP---PSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRPPT 384

 Score = 35.4 bits (80), Expect = 0.59
 Identities = 30/93 (32%), Positives = 32/93 (34%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P  RP P   P P    P    P  P   P P RPP  S P P RPP           P 
Sbjct: 307 PFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPS-PNPPRPPP----------PS 355

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPP 301
            +P         P+P   P P P P      PP
Sbjct: 356 PSP---------PKPPPPPSPPPRPPRRPPRPP 379

>pir||S50754 hypothetical protein WP6 - Chlamydomonas eugametos
           gi|530878|gb|AAB53954.1| amino acid feature:
           N-glycosylation sites, aa 41 .. 43, 46 .. 48, 51 .. 53,
           72 .. 74, 107 .. 109, 128 .. 130, 132 .. 134, 158 ..
           160, 163 .. 165; amino acid feature: Rod protein domain,
           aa 169 .. 340; amino acid feature: globular protein
           domain, aa 32 .. 168
          Length = 351

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 40/106 (37%), Positives = 52/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPS-VPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLP 403
           P   P P  +PSPS    P+  PS  P+  P P  P +   P P+  P+     +P   P
Sbjct: 172 PSPSPSPSPSPSPSPSPSPKASPSPSPKASPSP-SPKASPSPSPKASPAPSPQPSPTPSP 230

Query: 402 LAAPICAVQIS--QSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
            A+P+ + Q S   SPRP+  P PTP P+   S PPS A P   PS
Sbjct: 231 KASPVASPQQSPTPSPRPSPTPSPTPSPSPKASPPPS-ASPSASPS 275

 Score = 45.1 bits (105), Expect = 7e-04
 Identities = 40/103 (38%), Positives = 47/103 (44%), Gaps = 4/103 (3%)
 Frame = -1

Query: 567 PCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPLAAPI 388
           P PR +P+PS    P   PS P+  P P   PS S   P   P     + P   P A+P 
Sbjct: 244 PSPRPSPTPS----PTPSPS-PKASPPPSASPSAS---PSLSPKVSPSTPPTGSPAASP- 294

Query: 387 CAVQISQSPR--PAAGPYPTPLPALSGSAPP--SPALPLPHPS 271
                S SPR  P  G  P   P LS + PP  SP LP+P PS
Sbjct: 295 -----SGSPRASPPGGGPPAMSPRLSPTIPPTRSPILPIPIPS 332

>sp|P40602|APG_ARATH Anter-specific proline-rich protein APG precursor
           gi|16604458|gb|AAL24235.1| At1g20130/T20H2_9
           [Arabidopsis thaliana] gi|30725276|gb|AAP37660.1|
           At1g20130/T20H2_9 [Arabidopsis thaliana]
          Length = 534

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 40/109 (36%), Positives = 44/109 (39%), Gaps = 6/109 (5%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSV-----PRTRPCPRRPPSRSWPCPRRPPSRYWLSAP 415
           P   PCP   P P    PP   PS      P+ +P P  PP+    CP  PP      AP
Sbjct: 83  PGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPA----CPPTPPKPQPKPAP 138

Query: 414 *SLPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPA-LPLPHPS 271
              P  AP  A +    P P   P PTP P      PP PA  P P PS
Sbjct: 139 PPEPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPS 187

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 34/102 (33%), Positives = 43/102 (41%)
 Frame = -1

Query: 579 PRTRPCPRRTPSPSWLFPPRTWPSVPRTRPCPRRPPSRSWPCPRRPPSRYWLSAP*SLPL 400
           P   P P   P P  + PP   P+ P+ +P P  PP    P P  PP      AP  +P 
Sbjct: 105 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPE---PKPAPPP------APKPVPC 155

Query: 399 AAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHP 274
            +P      +  P P  GP P P PA + +  P PA   P P
Sbjct: 156 PSPPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKP 197

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 38/109 (34%), Positives = 43/109 (38%), Gaps = 13/109 (11%)
 Frame = -1

Query: 558 RRTPSPSWLFP-PRTWPSVPRT---RPCPRRPPSRSW---------PCPRRPPSRYWLSA 418
           R  P P W  P P+ WP  P T    P P  PP  S          PCP  PP       
Sbjct: 41  RLWPWPLWPRPYPQPWPMNPPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPK------ 94

Query: 417 P*SLPLAAPICAVQISQSPRPAAGPYPTPLPALSGSAPPSPALPLPHPS 271
           P   P  AP      S SP P+  P P P P    + PP+P  P P P+
Sbjct: 95  PQPKPPPAP------SPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPA 137



EST assemble image


clone accession position
1 LCL005f09_r AV626277 1 491
2 LCL074g12_r AV630174 5 448
3 LCL026f12_r AV627436 71 535
4 MXL042g01_r BP095495 209 585




Chlamydomonas reinhardtii
Kazusa DNA Research Institute