KCC003060A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003060A_C01 KCC003060A_c01
gggcgtggtgccggcgctgcactcgccgctcatgtcggtgaccaacgccgtgtcgggcct
gacggcggtgggcggcatggTGCTGGCCGGCGGCGGCCTGCTGCCCGGCAACACCTCGCA
GGCGCTGGCGGGCCTGGCGGTGGCGGCCAGCGCCATCAACATTGGCGGCGGCTTCACCAT
CACGCAGCGCATGCTGGACATGTTCAAGCGCCCCACCGACCCGGTGGAGTACAACCAGCT
GTACGCGCTGCCCGCCGCCACGCTGGTGGGCGGCTACGTGGCGGCCTCGCTGTTCATGGG
CGGCACCGGCGGCGACCCCGAGGGCGTCACCTCGGCCTCCTACCTGGCCTCCTCGGCGAT
GTGCATCGCCGCCATCGCCTGCCTGGCCAACCAGTCGTCGGCGCGCACCGGCAACGCGCT
GGGCATGGCGGGCGTGGGCACCGGCATCGCAACCACCCTGGGCGTCATGAACGCGCCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003060A_C01 KCC003060A_c01
         (479 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_892022.1| nicotinamide nucleotide transhydrogenase [Homo ...   183  1e-45
sp|Q13423|NNTM_HUMAN NAD(P) transhydrogenase, mitochondrial prec...   183  1e-45
ref|NP_036475.2| nicotinamide nucleotide transhydrogenase [Homo ...   183  1e-45
gb|AAA21440.1| nicotinamide nucleotide transhydrogenase               182  2e-45
ref|NP_776368.1| nicotinamide nucleotide transhydrogenase [Bos t...   182  2e-45

>ref|NP_892022.1| nicotinamide nucleotide transhydrogenase [Homo sapiens]
           gi|7431833|pir||G02257 NAD(P) transhydrogenase
           (B-specific) (EC 1.6.1.1) precursor, mitochondrial -
           human gi|1110520|gb|AAC51914.1| nicotinamide nucleotide
           transhydrogenase [Homo sapiens]
          Length = 1086

 Score =  183 bits (464), Expect = 1e-45
 Identities = 96/156 (61%), Positives = 110/156 (69%)
 Frame = +2

Query: 2   GVVPALHSPLMSVTNAVSGLTAVGGMVLAGGGLLPGNTSQALAGLAVAASAINIGGGFTI 181
           GV PALHSPLMSVTNA+SGLTAVGG+ L GG L P  TSQ LA LA   S++NI GGF +
Sbjct: 518 GVTPALHSPLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLV 577

Query: 182 TQRMLDMFKRPTDPVEYNQLYALPAATLVGGYVAASLFMGGTGGDPEGVTSASYLASSAM 361
           TQRMLDMFKRPTDP EYN LY LPA T VGGY+AA L+ G        +    YL S   
Sbjct: 578 TQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYLAA-LYSG------YNIEQIMYLGSGLC 630

Query: 362 CIAAIACLANQSSARTGNALGMAGVGTGIATTLGVM 469
           C+ A+A L+ Q +AR GNALGM GV  G+A TLGV+
Sbjct: 631 CVGALAGLSTQGTARLGNALGMIGVAGGLAATLGVL 666

>sp|Q13423|NNTM_HUMAN NAD(P) transhydrogenase, mitochondrial precursor (Pyridine
           nucleotide transhydrogenase) (Nicotinamide nucleotide
           transhydrogenase) gi|1000704|emb|CAA90428.1| NAD(P)
           transhydrogenase [Homo sapiens] gi|1589396|prf||2211247B
           nicotinamide nucleotide transhydrogenase
          Length = 1086

 Score =  183 bits (464), Expect = 1e-45
 Identities = 96/156 (61%), Positives = 110/156 (69%)
 Frame = +2

Query: 2   GVVPALHSPLMSVTNAVSGLTAVGGMVLAGGGLLPGNTSQALAGLAVAASAINIGGGFTI 181
           GV PALHSPLMSVTNA+SGLTAVGG+ L GG L P  TSQ LA LA   S++NI GGF +
Sbjct: 518 GVTPALHSPLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLV 577

Query: 182 TQRMLDMFKRPTDPVEYNQLYALPAATLVGGYVAASLFMGGTGGDPEGVTSASYLASSAM 361
           TQRMLDMFKRPTDP EYN LY LPA T VGGY+AA L+ G        +    YL S   
Sbjct: 578 TQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYLAA-LYSG------YNIEQIMYLGSGLC 630

Query: 362 CIAAIACLANQSSARTGNALGMAGVGTGIATTLGVM 469
           C+ A+A L+ Q +AR GNALGM GV  G+A TLGV+
Sbjct: 631 CVGALAGLSTQGTARLGNALGMIGVAGGLAATLGVL 666

>ref|NP_036475.2| nicotinamide nucleotide transhydrogenase [Homo sapiens]
           gi|21732286|emb|CAD38536.1| hypothetical protein [Homo
           sapiens]
          Length = 1086

 Score =  183 bits (464), Expect = 1e-45
 Identities = 96/156 (61%), Positives = 110/156 (69%)
 Frame = +2

Query: 2   GVVPALHSPLMSVTNAVSGLTAVGGMVLAGGGLLPGNTSQALAGLAVAASAINIGGGFTI 181
           GV PALHSPLMSVTNA+SGLTAVGG+ L GG L P  TSQ LA LA   S++NI GGF +
Sbjct: 518 GVTPALHSPLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLV 577

Query: 182 TQRMLDMFKRPTDPVEYNQLYALPAATLVGGYVAASLFMGGTGGDPEGVTSASYLASSAM 361
           TQRMLDMFKRPTDP EYN LY LPA T VGGY+AA L+ G        +    YL S   
Sbjct: 578 TQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYLAA-LYSG------YNIEQIMYLGSGLC 630

Query: 362 CIAAIACLANQSSARTGNALGMAGVGTGIATTLGVM 469
           C+ A+A L+ Q +AR GNALGM GV  G+A TLGV+
Sbjct: 631 CVGALAGLSTQGTARLGNALGMIGVAGGLAATLGVL 666

>gb|AAA21440.1| nicotinamide nucleotide transhydrogenase
          Length = 1035

 Score =  182 bits (462), Expect = 2e-45
 Identities = 96/154 (62%), Positives = 109/154 (70%)
 Frame = +2

Query: 2   GVVPALHSPLMSVTNAVSGLTAVGGMVLAGGGLLPGNTSQALAGLAVAASAINIGGGFTI 181
           GV PALHSPLMSVTNA+SGLTAVGG+VL GG L P  TSQ LA LA   S++NI GGF +
Sbjct: 467 GVTPALHSPLMSVTNAISGLTAVGGLVLMGGHLYPSTTSQGLAALATFISSVNIAGGFLV 526

Query: 182 TQRMLDMFKRPTDPVEYNQLYALPAATLVGGYVAASLFMGGTGGDPEGVTSASYLASSAM 361
           TQRMLDMFKRPTDP EYN LY LPA T VGGY+ ASL+ G        +    YL S   
Sbjct: 527 TQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYL-ASLYSG------YNIEQIMYLGSGLC 579

Query: 362 CIAAIACLANQSSARTGNALGMAGVGTGIATTLG 463
           C+ A+A L+ Q +AR GNALGM GV  G+A TLG
Sbjct: 580 CVGALAGLSTQGTARLGNALGMIGVAGGLAATLG 613

>ref|NP_776368.1| nicotinamide nucleotide transhydrogenase [Bos taurus]
           gi|163410|gb|AAA30660.1| nicotinamide nucleotide
           transhydrogenase
          Length = 1086

 Score =  182 bits (462), Expect = 2e-45
 Identities = 96/154 (62%), Positives = 109/154 (70%)
 Frame = +2

Query: 2   GVVPALHSPLMSVTNAVSGLTAVGGMVLAGGGLLPGNTSQALAGLAVAASAINIGGGFTI 181
           GV PALHSPLMSVTNA+SGLTAVGG+VL GG L P  TSQ LA LA   S++NI GGF +
Sbjct: 518 GVTPALHSPLMSVTNAISGLTAVGGLVLMGGHLYPSTTSQGLAALATFISSVNIAGGFLV 577

Query: 182 TQRMLDMFKRPTDPVEYNQLYALPAATLVGGYVAASLFMGGTGGDPEGVTSASYLASSAM 361
           TQRMLDMFKRPTDP EYN LY LPA T VGGY+ ASL+ G        +    YL S   
Sbjct: 578 TQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYL-ASLYSG------YNIEQIMYLGSGLC 630

Query: 362 CIAAIACLANQSSARTGNALGMAGVGTGIATTLG 463
           C+ A+A L+ Q +AR GNALGM GV  G+A TLG
Sbjct: 631 CVGALAGLSTQGTARLGNALGMIGVAGGLAATLG 664



EST assemble image


clone accession position
1 LCL005c08_r AV626258 1 479
2 LCL092h05_r AV631374 160 441




Chlamydomonas reinhardtii
Kazusa DNA Research Institute