Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003055A_C01 KCC003055A_c01
(339 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_316442.1| ENSANGP00000021115 [Anopheles gambiae] gi|30176... 36 0.16
ref|XP_346819.1| hypothetical protein XP_346818 [Rattus norvegicus] 33 0.80
ref|NP_736838.1| putative NADH plastoquinone oxidoreductase [Cor... 33 0.80
ref|ZP_00008374.1| COG1028: Dehydrogenases with different specif... 33 0.80
ref|NP_113789.2| calcium channel, voltage-dependent, T type, alp... 33 1.0
>ref|XP_316442.1| ENSANGP00000021115 [Anopheles gambiae] gi|30176049|gb|EAA11151.2|
ENSANGP00000021115 [Anopheles gambiae str. PEST]
Length = 257
Score = 35.8 bits (81), Expect = 0.16
Identities = 26/83 (31%), Positives = 38/83 (45%)
Frame = +2
Query: 86 SMHGSRLRPRRSSATQDIPAGPSTPTEDVRLGGKLTGSGIPSSPSPATLAQISTVLAHQI 265
S SR R RR A + P+ S PT GG T ++PS T+ + T + I
Sbjct: 30 SRGSSRRRHRRLGAMDESPSVESVPT-----GGTTT-----TTPSTTTIQSLPTEVLTAI 79
Query: 266 GNFLPQNDLLAARLVCKLWKELL 334
+ L DL + R C+ W E++
Sbjct: 80 FHHLRVPDLASVRQTCRHWYEIV 102
>ref|XP_346819.1| hypothetical protein XP_346818 [Rattus norvegicus]
Length = 926
Score = 33.5 bits (75), Expect = 0.80
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = -1
Query: 201 PLPVSLPPSLTSSVGVDGPAGMSCVALLRRGRSREPCMLHLAVAVPPAVPLSVAFPCLVR 22
P P PPS V G G + V+ + S C+L+ A PP PC
Sbjct: 421 PAPPRAPPSRPGEAAVAGGPGSAAVSPVSSSGSALECILYKAEGAPPTQGSFAPLPCKPP 480
Query: 21 SRISC 7
+ SC
Sbjct: 481 AASSC 485
>ref|NP_736838.1| putative NADH plastoquinone oxidoreductase [Corynebacterium
efficiens YS-314] gi|23492063|dbj|BAC17038.1| putative
NADH plastoquinone oxidoreductase [Corynebacterium
efficiens YS-314]
Length = 547
Score = 33.5 bits (75), Expect = 0.80
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = -1
Query: 339 RGSNSFQSLQTRRAASRSFCGRKLPIWCARTVEIWASVAGLGEDGIPLPVSLPPSLTSSV 160
RGS F + + S CG IW ++A GL GI +P+ + +
Sbjct: 26 RGSRMFHAFVLLAVLTASLCGAGALIWLTSDGGVYAHSIGLWPGGIAIPLVADMFSSLML 85
Query: 159 GVDGPAGMSCVAL-LRRGRSREPCMLHLAVAVPPAV 55
G ++CVA L G R P L + + V
Sbjct: 86 AATGIITIACVAFALAAGFYRSPYFAPLVLVMVTGV 121
>ref|ZP_00008374.1| COG1028: Dehydrogenases with different specificities (related to
short-chain alcohol dehydrogenases) [Rhodopseudomonas
palustris]
Length = 450
Score = 33.5 bits (75), Expect = 0.80
Identities = 18/48 (37%), Positives = 25/48 (51%)
Frame = +3
Query: 126 RHKTFLLVHLRPRRM*G*AASSRAAVSHPRRAPQRSPRFRRFSRTKSA 269
R + L + +RP R G AA+ A+V HPR+ P RF R +A
Sbjct: 90 RRRGVLRLEIRPARAVGVAAAGAASVRHPRQLRDAGPGRHRFCRRAAA 137
>ref|NP_113789.2| calcium channel, voltage-dependent, T type, alpha 1G subunit [Rattus
norvegicus] gi|5921700|sp|O54898|CCAG_RAT
Voltage-dependent T-type calcium channel alpha-1G subunit
gi|7514003|pir||T09053 low voltage-activated, T-type
calcium channel alpha chain - rat
gi|3786351|gb|AAC67372.1| low voltage-activated, T-type
calcium channel alpha subunit; alpha-1G calcium channel
alpha subunit [Rattus norvegicus]
gi|11422004|gb|AAG35186.2|AF290212_1 calcium channel
alpha-1-G subunit [Rattus norvegicus]
Length = 2254
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 281 VEESCRFGAREPSKSGRALRGSARMGYRCP*ACRLALHPPWA 156
V E+ G+R S SG A G+A +CP + R + H PW+
Sbjct: 1036 VGEALGSGSRRTSSSGSAEPGAAHHEMKCPPSARSSPHSPWS 1077
