KCC003048A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003048A_C01 KCC003048A_c01
ctgctgttcgccacgcccggcggcgagtgccacgtgtacgacggcaacggcaacggggtg
gccaaggtgccgctctactgCAATGAGGGCTACGCCGGCGCCTCCAAGATCATCGGCGTG
GAGTGGTACGACGGCGTGGAGGGCTATGCCGAGCCCAACTGCCCCGTGCTGGCCATCTGC
CTGGACAACGGCCGCATGCAGCTGATGCGCTACGAGTCGGACGACAACGCGGTGTGCATC
GACACCGGCATCAAACCCGTCAAGGTCAAGTGGAACATGAACGGCACGATCTTGGCGGTG
GCGGGCTTCCAGATGAGCAGCGCGGTGGCGGACGGGCGCGAGCTGTGGATGGTGCAGTTC
TACAACCACAACGGCGAGCACCTGCGCACACTGCGTGTGCCGGGCGGCGGCATCAGCGGC
ATCTCGTGGGAGGGCAACGGCCTGCGCCTGGCGCTGTCGGTGGACAGCTACGTGTACTTC
GCCAACGTGCGGCCCGACTACAAGTGGGGCTACTTCTGCAACACGCTGGTGTACGCCTTC
AACCGGCCCGACCGCAGCGAGCACTGCGTCATGTTCTGGGACACCAAGAACAACGACAAG
TACCCCAAGTACGTGCGCAAGCTGGTGGCCATCCAGGCCTTCGGCGACTTCTGCGTGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003048A_C01 KCC003048A_c01
         (659 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_065830.1| KIAA1336 protein [Homo sapiens] gi|22477171|gb|...   275  3e-73
dbj|BAA92574.2| KIAA1336 protein [Homo sapiens]                       275  3e-73
ref|XP_233960.2| similar to KIAA1336 protein [Rattus norvegicus]      273  2e-72
dbj|BAC27232.1| unnamed protein product [Mus musculus]                271  5e-72
dbj|BAB29866.1| unnamed protein product [Mus musculus]                271  5e-72

>ref|NP_065830.1| KIAA1336 protein [Homo sapiens] gi|22477171|gb|AAH36659.1| KIAA1336
           protein [Homo sapiens]
          Length = 1170

 Score =  275 bits (704), Expect = 3e-73
 Identities = 124/219 (56%), Positives = 160/219 (72%)
 Frame = +1

Query: 1   LLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKIIGVEWYDGVEGYAEPNCPVLAIC 180
           LLF    GE H+YD  GN + K+ L C     GA  I G+ WY G EGY EP+CP LA+C
Sbjct: 171 LLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAVC 230

Query: 181 LDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSAVADGRELWMVQF 360
            DNGR Q+MR+E+D N V IDTG+  V ++WN  G++LAVAGFQ   A    +++ +VQF
Sbjct: 231 FDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQ--KAAMQDKDVNIVQF 288

Query: 361 YNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVYAF 540
           Y   GEHL TL+VPG  IS +SWEG GL++AL+VDS++YFAN+RP+YKWGY  NT+VYA+
Sbjct: 289 YTPFGEHLGTLKVPGKEISALSWEGGGLKIALAVDSFIYFANIRPNYKWGYCSNTVVYAY 348

Query: 541 NRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCV 657
            RPDR E+CV+FWDTKNN+KY KYV+ L++I   GDFC+
Sbjct: 349 TRPDRPEYCVVFWDTKNNEKYVKYVKGLISITTCGDFCI 387

>dbj|BAA92574.2| KIAA1336 protein [Homo sapiens]
          Length = 1219

 Score =  275 bits (704), Expect = 3e-73
 Identities = 124/219 (56%), Positives = 160/219 (72%)
 Frame = +1

Query: 1   LLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKIIGVEWYDGVEGYAEPNCPVLAIC 180
           LLF    GE H+YD  GN + K+ L C     GA  I G+ WY G EGY EP+CP LA+C
Sbjct: 209 LLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAVC 268

Query: 181 LDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSAVADGRELWMVQF 360
            DNGR Q+MR+E+D N V IDTG+  V ++WN  G++LAVAGFQ   A    +++ +VQF
Sbjct: 269 FDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQ--KAAMQDKDVNIVQF 326

Query: 361 YNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVYAF 540
           Y   GEHL TL+VPG  IS +SWEG GL++AL+VDS++YFAN+RP+YKWGY  NT+VYA+
Sbjct: 327 YTPFGEHLGTLKVPGKEISALSWEGGGLKIALAVDSFIYFANIRPNYKWGYCSNTVVYAY 386

Query: 541 NRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCV 657
            RPDR E+CV+FWDTKNN+KY KYV+ L++I   GDFC+
Sbjct: 387 TRPDRPEYCVVFWDTKNNEKYVKYVKGLISITTCGDFCI 425

>ref|XP_233960.2| similar to KIAA1336 protein [Rattus norvegicus]
          Length = 1129

 Score =  273 bits (698), Expect = 2e-72
 Identities = 123/219 (56%), Positives = 158/219 (71%)
 Frame = +1

Query: 1   LLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKIIGVEWYDGVEGYAEPNCPVLAIC 180
           LLF    GE H+YD  GN + K+ L C     GA  I G+ WY G EGY EP+CP LAIC
Sbjct: 304 LLFGMANGEIHIYDNQGNFIMKMKLNCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAIC 363

Query: 181 LDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSAVADGRELWMVQF 360
            DNGR Q+MR+E+D N V IDTG+  V ++WN  G++LAVAG Q    V   +++ +VQF
Sbjct: 364 FDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIGSVLAVAGSQ--KVVTQDKDVNIVQF 421

Query: 361 YNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVYAF 540
           Y   GEHL TL+VPG  +  +SWEG GL++AL+VDS++YFAN+RPDYKWGY  NT+VYA+
Sbjct: 422 YTPFGEHLGTLKVPGKQMCSLSWEGGGLKIALAVDSFIYFANIRPDYKWGYCSNTVVYAY 481

Query: 541 NRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCV 657
            RPDR E+CV+FWDTKNN+KY KYV+ L++I   GDFC+
Sbjct: 482 TRPDRPEYCVVFWDTKNNEKYVKYVKSLISITTCGDFCI 520

>dbj|BAC27232.1| unnamed protein product [Mus musculus]
          Length = 412

 Score =  271 bits (694), Expect = 5e-72
 Identities = 122/219 (55%), Positives = 158/219 (71%)
 Frame = +1

Query: 1   LLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKIIGVEWYDGVEGYAEPNCPVLAIC 180
           LLF    GE H+YD  GN + K+ L C     GA  I G+ WY G EGY EP+CP LAIC
Sbjct: 171 LLFGMANGEIHIYDNQGNFIMKMKLNCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAIC 230

Query: 181 LDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSAVADGRELWMVQF 360
            DNGR Q+MR+E+D N V IDTG+  V ++WN  G++LAVAG Q    V   +++ +VQF
Sbjct: 231 FDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIGSVLAVAGSQ--KVVTQDKDINIVQF 288

Query: 361 YNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVYAF 540
           Y   GEHL TL+VPG  +  +SWEG GL++AL+VDS++YFAN+RPDYKWGY  NT+VYA+
Sbjct: 289 YTPFGEHLGTLKVPGKQMCSLSWEGGGLKIALAVDSFIYFANIRPDYKWGYCSNTVVYAY 348

Query: 541 NRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCV 657
            RPDR E+CV+FWDTKN++KY KYV+ L++I   GDFC+
Sbjct: 349 TRPDRPEYCVVFWDTKNSEKYVKYVKSLISITTCGDFCI 387

>dbj|BAB29866.1| unnamed protein product [Mus musculus]
          Length = 452

 Score =  271 bits (694), Expect = 5e-72
 Identities = 122/219 (55%), Positives = 158/219 (71%)
 Frame = +1

Query: 1   LLFATPGGECHVYDGNGNGVAKVPLYCNEGYAGASKIIGVEWYDGVEGYAEPNCPVLAIC 180
           LLF    GE H+YD  GN + K+ L C     GA  I G+ WY G EGY EP+CP LAIC
Sbjct: 171 LLFGMANGEIHIYDNQGNFIMKMKLNCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAIC 230

Query: 181 LDNGRMQLMRYESDDNAVCIDTGIKPVKVKWNMNGTILAVAGFQMSSAVADGRELWMVQF 360
            DNGR Q+MR+E+D N V IDTG+  V ++WN  G++LAVAG Q    V   +++ +VQF
Sbjct: 231 FDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIGSVLAVAGSQ--KVVTQDKDINIVQF 288

Query: 361 YNHNGEHLRTLRVPGGGISGISWEGNGLRLALSVDSYVYFANVRPDYKWGYFCNTLVYAF 540
           Y   GEHL TL+VPG  +  +SWEG GL++AL+VDS++YFAN+RPDYKWGY  NT+VYA+
Sbjct: 289 YTPFGEHLGTLKVPGKQMCSLSWEGGGLKIALAVDSFIYFANIRPDYKWGYCSNTVVYAY 348

Query: 541 NRPDRSEHCVMFWDTKNNDKYPKYVRKLVAIQAFGDFCV 657
            RPDR E+CV+FWDTKN++KY KYV+ L++I   GDFC+
Sbjct: 349 TRPDRPEYCVVFWDTKNSEKYVKYVKSLISITTCGDFCI 387



EST assemble image


clone accession position
1 MXL061a03_r BP096575 1 460
2 LCL002g05_r AV626125 358 659




Chlamydomonas reinhardtii
Kazusa DNA Research Institute