Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003047A_C01 KCC003047A_c01
(373 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP85377.1| RNA binding protein Rp120 [Oryza sativa (japonica... 104 4e-22
ref|NP_200986.1| 100 kDa coactivator - like protein [Arabidopsis... 98 3e-20
ref|NP_196352.2| expressed protein [Arabidopsis thaliana] gi|180... 94 4e-19
pir||T49874 hypothetical protein T2I1.60 - Arabidopsis thaliana ... 94 4e-19
dbj|BAC06184.1| 110 kDa 4SNc-Tudor domain protein [Pisum sativum] 86 1e-16
>gb|AAP85377.1| RNA binding protein Rp120 [Oryza sativa (japonica cultivar-group)]
gi|32966012|gb|AAP85378.1| RNA binding protein Rp120
[Oryza sativa (japonica cultivar-group)]
Length = 986
Score = 104 bits (259), Expect = 4e-22
Identities = 50/80 (62%), Positives = 61/80 (75%)
Frame = +3
Query: 126 ATGWLRGTVKEVVSGDTLVVAGTTKGPGPAPEKRITLSSLIAPKLGKRDGSIMDEPFAWE 305
A+GWLRG VK V SGD L++ G+TK P PEK ITLS L+AP+L +R G +DEPFAWE
Sbjct: 7 ASGWLRGKVKGVTSGDCLLIMGSTKADVPPPEKSITLSYLMAPRLARRGG--VDEPFAWE 64
Query: 306 AREFLRKKCVGQACVFRVDY 365
+REFLRK C+G+ FRVDY
Sbjct: 65 SREFLRKLCIGKEVTFRVDY 84
Score = 56.6 bits (135), Expect = 8e-08
Identities = 31/75 (41%), Positives = 45/75 (59%), Gaps = 1/75 (1%)
Frame = +3
Query: 144 GTVKEVVSGDTLVVAGTTKGPG-PAPEKRITLSSLIAPKLGKRDGSIMDEPFAWEAREFL 320
G V EVVSGD ++VA G P+ E+R+ LSS+ APK+G + FA EA+EFL
Sbjct: 383 GKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAPKMGNPRRDEKPDNFAREAKEFL 442
Query: 321 RKKCVGQACVFRVDY 365
R + +G+ ++Y
Sbjct: 443 RTRLIGKQVTVEMEY 457
>ref|NP_200986.1| 100 kDa coactivator - like protein [Arabidopsis thaliana]
gi|10176871|dbj|BAB10078.1| transcription factor-like
protein [Arabidopsis thaliana]
gi|25083258|gb|AAN72055.1| 100 kDa coactivator - like
protein [Arabidopsis thaliana]
Length = 985
Score = 97.8 bits (242), Expect = 3e-20
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Frame = +3
Query: 123 MATG------WLRGTVKEVVSGDTLVVAGTTKG-PGPAPEKRITLSSLIAPKLGKRDGSI 281
MATG WL+G VK V SGD LV+ T GP PEK ITLSSL+APK+ +R G
Sbjct: 1 MATGAATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGG-- 58
Query: 282 MDEPFAWEAREFLRKKCVGQACVFRVDYVV 371
+DEPFAWE+REFLRK C+G+ F+VDY V
Sbjct: 59 IDEPFAWESREFLRKLCIGKEVAFKVDYKV 88
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 144 GTVKEVVSGDTLVVAGTTKGPG-PAPEKRITLSSLIAPKLGKRDGSIMDEPFAWEAREFL 320
G V EVVSGD LVVA + G P E+R+ LSS+ +PK+G P+A EA+EFL
Sbjct: 386 GKVVEVVSGDCLVVADDSIPFGSPMAERRVCLSSIRSPKMGNPRREEKPAPYAREAKEFL 445
Query: 321 RKKCVGQACVFRVDY 365
R+K +G + +++Y
Sbjct: 446 RQKLIGMEVIVQMEY 460
>ref|NP_196352.2| expressed protein [Arabidopsis thaliana] gi|18086332|gb|AAL57629.1|
AT5g07350/T2I1_60 [Arabidopsis thaliana]
Length = 991
Score = 94.4 bits (233), Expect = 4e-19
Identities = 49/88 (55%), Positives = 61/88 (68%), Gaps = 5/88 (5%)
Frame = +3
Query: 123 MATG----WLRGTVKEVVSGDTLVVAGTTKG-PGPAPEKRITLSSLIAPKLGKRDGSIMD 287
MATG WL+G VK V SGD LV+ + GP PEK IT SSL+APK+ +R G +D
Sbjct: 1 MATGAENQWLKGRVKAVTSGDCLVITALSHNRAGPPPEKTITFSSLMAPKMARRGG--ID 58
Query: 288 EPFAWEAREFLRKKCVGQACVFRVDYVV 371
EPFAWE++EFLRK C+G+ F+VDY V
Sbjct: 59 EPFAWESKEFLRKLCIGKEVAFKVDYKV 86
Score = 60.8 bits (146), Expect = 4e-09
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 144 GTVKEVVSGDTLVVAGTTKGPG-PAPEKRITLSSLIAPKLGKRDGSIMDEPFAWEAREFL 320
G V EVVSGD L+VA G PA E+R+ LSS+ +PK+G P+A EAREFL
Sbjct: 382 GKVVEVVSGDCLIVADDAVPFGSPAAERRVCLSSIRSPKMGNPRREEKPAPYAREAREFL 441
Query: 321 RKKCVGQACVFRVDY 365
R++ +G+ + +++Y
Sbjct: 442 RQRLIGKQVIVQMEY 456
>pir||T49874 hypothetical protein T2I1.60 - Arabidopsis thaliana
gi|7576173|emb|CAB87924.1| putative protein [Arabidopsis
thaliana]
Length = 1051
Score = 94.4 bits (233), Expect = 4e-19
Identities = 49/88 (55%), Positives = 61/88 (68%), Gaps = 5/88 (5%)
Frame = +3
Query: 123 MATG----WLRGTVKEVVSGDTLVVAGTTKG-PGPAPEKRITLSSLIAPKLGKRDGSIMD 287
MATG WL+G VK V SGD LV+ + GP PEK IT SSL+APK+ +R G +D
Sbjct: 1 MATGAENQWLKGRVKAVTSGDCLVITALSHNRAGPPPEKTITFSSLMAPKMARRGG--ID 58
Query: 288 EPFAWEAREFLRKKCVGQACVFRVDYVV 371
EPFAWE++EFLRK C+G+ F+VDY V
Sbjct: 59 EPFAWESKEFLRKLCIGKEVAFKVDYKV 86
Score = 60.8 bits (146), Expect = 4e-09
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 144 GTVKEVVSGDTLVVAGTTKGPG-PAPEKRITLSSLIAPKLGKRDGSIMDEPFAWEAREFL 320
G V EVVSGD L+VA G PA E+R+ LSS+ +PK+G P+A EAREFL
Sbjct: 382 GKVVEVVSGDCLIVADDAVPFGSPAAERRVCLSSIRSPKMGNPRREEKPAPYAREAREFL 441
Query: 321 RKKCVGQACVFRVDY 365
R++ +G+ + +++Y
Sbjct: 442 RQRLIGKQVIVQMEY 456
>dbj|BAC06184.1| 110 kDa 4SNc-Tudor domain protein [Pisum sativum]
Length = 989
Score = 85.9 bits (211), Expect = 1e-16
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +3
Query: 129 TGWLRGTVKEVVSGDTLVVAGTTKGP--GPAPEKRITLSSLIAPKLGKRDGSIMDEPFAW 302
+ W + VK V SGD +VV G PEK ITLSSLIAP+L +R G +DE FAW
Sbjct: 9 SAWYKAKVKAVTSGDCVVVVSVAANAKSGVLPEKSITLSSLIAPRLARRGG--VDEAFAW 66
Query: 303 EAREFLRKKCVGQACVFRVDYVV 371
E+REFLRK C+G+ FR+DY V
Sbjct: 67 ESREFLRKLCIGREITFRIDYTV 89
Score = 53.9 bits (128), Expect = 5e-07
Identities = 30/77 (38%), Positives = 46/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 138 LRGTVKEVVSGDTLVVAGTTKGPG-PAPEKRITLSSLIAPKLGKRDGSIMDEPFAWEARE 314
L G + EVVSGD ++VA + G P E+R+ LSS+ PK+G P+A EA+E
Sbjct: 382 LTGKLVEVVSGDCVIVADDSIPYGSPQAERRVNLSSIRCPKMGNPRRDEKPAPYAREAKE 441
Query: 315 FLRKKCVGQACVFRVDY 365
FLR + +G+ +++Y
Sbjct: 442 FLRTRLIGRQVNVQMEY 458
