KCC003041A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003041A_C01 KCC003041A_c01
tgcgagaccatgggtggtgccacggccatttgctccgacaagaccggcacgctgacggag
aaccgcatgacagtggtggaGGGCTGGTTCGTGGGCCGCCACTTCAGCACTGCGCCCAAG
GCCAATGAGCTGGACCCGGAGGTTTGCGAGCAGCTCAAGATGAACTGTGCCATGAATGCC
AAGGCCTTCATCATCGAGAAGGACAACGGCAAGATGGACTTCGTGGGCAACCGGACGGAG
TGCGCTCTGCTGCTGTTCATGAACAAGGAGCTGGGATCCAACTACAACGATTACCGCCAC
AAGTACGACAAGGCCGTGGTCAAGCTGTACGGCTTTTCCAGTGCCAAGAAGATGGCCAGC
GTGTTGATCCAGCTGCCCGACAAGCTGCGCCTGTACAACAAGGGAGCGGCGGAGTGGGTG
CTAAAGCGCTGCATCCGCTGCCACACCGAGGCGGGTATCGTGGAGATGACTCCGGCCCTG
CGCGGCAAGCTGCTGGACGAGGTGACCAACATGGCCAAGCGCGGCCTGCGCTGCATCTGC
CTCTCCTACACCGACTACCCCATCAGCGACCCCTCGCGCCCCGAGAACTTCTTTGAGGAG
GCGGACACCGTGGACGACAACCTGACCTGCCTGGGCATCGTGGGCATCAAGGACCCCGTG
CGTGCCGAGGTGCCGCTGGCCGTGCGCACCTGCAAGCGCGCCGGCATCGTCGTGCGCATG
GTGACAGGTGACAACATCCACACGGCGCAGCACATCGCGCGCGAGTGCGGCATCCTGTAC
GACATGGGTCCCAACCACCCGGAGCACGTGGCCATGGAGGGACCCGTGTTCCGGGAGATG
CTCAAGGACCCCGACTTCATGGCGCTGCGTGAGCGCATGAACGACCCTAAGGCGGACGGC
CAGAAAGAGGCGCTGCAGGAGATGAAGGAGAAGATCAACCACGTGCGTGTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003041A_C01 KCC003041A_c01
         (952 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P11505|ATB1_RAT Plasma membrane calcium-transporting ATPase 1...   213  3e-54
gb|AAH29045.1| 2810442I22Rik protein [Mus musculus] gi|29351619|...   213  3e-54
ref|NP_445763.1| ATPase, Ca++ transporting, plasma membrane 1 [R...   213  3e-54
ref|XP_125827.3| RIKEN cDNA 2810442I22 [Mus musculus]                 213  3e-54
sp|P54678|ATC1_DICDI Probable calcium-transporting ATPase PAT1 g...   212  7e-54

>sp|P11505|ATB1_RAT Plasma membrane calcium-transporting ATPase 1 (PMCA1) (Plasma
            membrane calcium pump isoform 1) (Plasma membrane calcium
            ATPase isoform 1)
          Length = 1258

 Score =  213 bits (543), Expect = 3e-54
 Identities = 126/304 (41%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
 Frame = +1

Query: 1    CETMGGATAICSDKTGTLTENRMTVVEGWFVGRHFSTAPKANELDPEVCEQL----KMNC 168
            CETMG ATAICSDKTGTLT NRMTVV+ +   +H+   P+   + P +   L     +NC
Sbjct: 463  CETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNC 522

Query: 169  AMNAKAFIIEKDNGKMDFVGNRTECALLLFMNKELGSNYNDYRHKY-DKAVVKLYGFSSA 345
            A  +K    EK+ G    VGN+TECALL F+  +L  +Y D R++  ++A+ K+Y F+S 
Sbjct: 523  AYTSKILPPEKEGGLPRHVGNKTECALLGFL-LDLKRDYQDVRNEIPEEALYKVYTFNSV 581

Query: 346  KKMASVLIQLPD-KLRLYNKGAAEWVLKRCIRCHTEAGIVEM-TPALRGKLLDEVTN-MA 516
            +K  S +++  D   R+++KGA+E +LK+C +  +  G  ++  P  R  ++  V   MA
Sbjct: 582  RKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMA 641

Query: 517  KRGLRCICLSYTDYPISDPSRPENFFEEADTVDDNLTCLGIVGIKDPVRAEVPLAVRTCK 696
              GLR ICL++ D+P  +P  PE  ++  + V   LTC+ +VGI+DPVR EVP A++ C+
Sbjct: 642  SEGLRTICLAFRDFPAGEPE-PE--WDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQ 698

Query: 697  RAGIVVRMVTGDNIHTAQHIARECGILYDMGPNHP--EHVAMEGPVFREMLKDPDFMALR 870
            RAGI VRMVTGDNI+TA+ IA +CGIL      HP  + + +EG  F   +++      +
Sbjct: 699  RAGITVRMVTGDNINTARAIATKCGIL------HPGEDFLCLEGKDFNRRIRNEKGEIEQ 752

Query: 871  ERMN 882
            ER++
Sbjct: 753  ERID 756

>gb|AAH29045.1| 2810442I22Rik protein [Mus musculus] gi|29351619|gb|AAH49262.1|
            Unknown (protein for IMAGE:5365647) [Mus musculus]
          Length = 914

 Score =  213 bits (543), Expect = 3e-54
 Identities = 126/304 (41%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
 Frame = +1

Query: 1    CETMGGATAICSDKTGTLTENRMTVVEGWFVGRHFSTAPKANELDPEVCEQL----KMNC 168
            CETMG ATAICSDKTGTLT NRMTVV+ +   +H+   P+   + P +   L     +NC
Sbjct: 157  CETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNC 216

Query: 169  AMNAKAFIIEKDNGKMDFVGNRTECALLLFMNKELGSNYNDYRHKY-DKAVVKLYGFSSA 345
            A  +K    EK+ G    VGN+TECALL F+  +L  +Y D R++  ++A+ K+Y F+S 
Sbjct: 217  AYTSKILPPEKEGGLPRHVGNKTECALLGFL-LDLKRDYQDVRNEIPEEALYKVYTFNSV 275

Query: 346  KKMASVLIQLPD-KLRLYNKGAAEWVLKRCIRCHTEAGIVEM-TPALRGKLLDEVTN-MA 516
            +K  S +++  D   R+++KGA+E +LK+C +  +  G  ++  P  R  ++  V   MA
Sbjct: 276  RKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMA 335

Query: 517  KRGLRCICLSYTDYPISDPSRPENFFEEADTVDDNLTCLGIVGIKDPVRAEVPLAVRTCK 696
              GLR ICL++ D+P  +P  PE  ++  + V   LTC+ +VGI+DPVR EVP A++ C+
Sbjct: 336  SEGLRTICLAFRDFPAGEPE-PE--WDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQ 392

Query: 697  RAGIVVRMVTGDNIHTAQHIARECGILYDMGPNHP--EHVAMEGPVFREMLKDPDFMALR 870
            RAGI VRMVTGDNI+TA+ IA +CGIL      HP  + + +EG  F   +++      +
Sbjct: 393  RAGITVRMVTGDNINTARAIATKCGIL------HPGEDFLCLEGKDFNRRIRNEKGEIEQ 446

Query: 871  ERMN 882
            ER++
Sbjct: 447  ERID 450

>ref|NP_445763.1| ATPase, Ca++ transporting, plasma membrane 1 [Rattus norvegicus]
            gi|92025|pir||A28065 Ca2+-transporting ATPase (EC
            3.6.3.8) 1 - rat gi|203047|gb|AAA73898.1| ATPase
          Length = 1176

 Score =  213 bits (543), Expect = 3e-54
 Identities = 126/304 (41%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
 Frame = +1

Query: 1    CETMGGATAICSDKTGTLTENRMTVVEGWFVGRHFSTAPKANELDPEVCEQL----KMNC 168
            CETMG ATAICSDKTGTLT NRMTVV+ +   +H+   P+   + P +   L     +NC
Sbjct: 463  CETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNC 522

Query: 169  AMNAKAFIIEKDNGKMDFVGNRTECALLLFMNKELGSNYNDYRHKY-DKAVVKLYGFSSA 345
            A  +K    EK+ G    VGN+TECALL F+  +L  +Y D R++  ++A+ K+Y F+S 
Sbjct: 523  AYTSKILPPEKEGGLPRHVGNKTECALLGFL-LDLKRDYQDVRNEIPEEALYKVYTFNSV 581

Query: 346  KKMASVLIQLPD-KLRLYNKGAAEWVLKRCIRCHTEAGIVEM-TPALRGKLLDEVTN-MA 516
            +K  S +++  D   R+++KGA+E +LK+C +  +  G  ++  P  R  ++  V   MA
Sbjct: 582  RKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMA 641

Query: 517  KRGLRCICLSYTDYPISDPSRPENFFEEADTVDDNLTCLGIVGIKDPVRAEVPLAVRTCK 696
              GLR ICL++ D+P  +P  PE  ++  + V   LTC+ +VGI+DPVR EVP A++ C+
Sbjct: 642  SEGLRTICLAFRDFPAGEPE-PE--WDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQ 698

Query: 697  RAGIVVRMVTGDNIHTAQHIARECGILYDMGPNHP--EHVAMEGPVFREMLKDPDFMALR 870
            RAGI VRMVTGDNI+TA+ IA +CGIL      HP  + + +EG  F   +++      +
Sbjct: 699  RAGITVRMVTGDNINTARAIATKCGIL------HPGEDFLCLEGKDFNRRIRNEKGEIEQ 752

Query: 871  ERMN 882
            ER++
Sbjct: 753  ERID 756

>ref|XP_125827.3| RIKEN cDNA 2810442I22 [Mus musculus]
          Length = 1220

 Score =  213 bits (543), Expect = 3e-54
 Identities = 126/304 (41%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
 Frame = +1

Query: 1    CETMGGATAICSDKTGTLTENRMTVVEGWFVGRHFSTAPKANELDPEVCEQL----KMNC 168
            CETMG ATAICSDKTGTLT NRMTVV+ +   +H+   P+   + P +   L     +NC
Sbjct: 463  CETMGNATAICSDKTGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNC 522

Query: 169  AMNAKAFIIEKDNGKMDFVGNRTECALLLFMNKELGSNYNDYRHKY-DKAVVKLYGFSSA 345
            A  +K    EK+ G    VGN+TECALL F+  +L  +Y D R++  ++A+ K+Y F+S 
Sbjct: 523  AYTSKILPPEKEGGLPRHVGNKTECALLGFL-LDLKRDYQDVRNEIPEEALYKVYTFNSV 581

Query: 346  KKMASVLIQLPD-KLRLYNKGAAEWVLKRCIRCHTEAGIVEM-TPALRGKLLDEVTN-MA 516
            +K  S +++  D   R+++KGA+E +LK+C +  +  G  ++  P  R  ++  V   MA
Sbjct: 582  RKSMSTVLKNSDGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMA 641

Query: 517  KRGLRCICLSYTDYPISDPSRPENFFEEADTVDDNLTCLGIVGIKDPVRAEVPLAVRTCK 696
              GLR ICL++ D+P  +P  PE  ++  + V   LTC+ +VGI+DPVR EVP A++ C+
Sbjct: 642  SEGLRTICLAFRDFPAGEPE-PE--WDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQ 698

Query: 697  RAGIVVRMVTGDNIHTAQHIARECGILYDMGPNHP--EHVAMEGPVFREMLKDPDFMALR 870
            RAGI VRMVTGDNI+TA+ IA +CGIL      HP  + + +EG  F   +++      +
Sbjct: 699  RAGITVRMVTGDNINTARAIATKCGIL------HPGEDFLCLEGKDFNRRIRNEKGEIEQ 752

Query: 871  ERMN 882
            ER++
Sbjct: 753  ERID 756

>sp|P54678|ATC1_DICDI Probable calcium-transporting ATPase PAT1 gi|1362215|pir||S57726 PAT1
            protein - slime mold (Dictyostelium discoideum)
            gi|895788|emb|CAA61551.1| PAT1 protein [Dictyostelium
            discoideum]
          Length = 1115

 Score =  212 bits (540), Expect = 7e-54
 Identities = 128/280 (45%), Positives = 171/280 (60%)
 Frame = +1

Query: 1    CETMGGATAICSDKTGTLTENRMTVVEGWFVGRHFSTAPKANELDPEVCEQLKMNCAMNA 180
            CETMG AT ICSDKTGTLT+N M+VV G   G   +    A ++   V   L    A+N+
Sbjct: 373  CETMGSATTICSDKTGTLTQNVMSVVTGTICGVFPTLDGIAQKIPKHVQSILTDGMAINS 432

Query: 181  KAFIIEKDNGKMDFVGNRTECALLLFMNKELGSNYNDYRHKYDKAVVKLYGFSSAKKMAS 360
             A+      GK++F+G++TECALL F  K  G +YN+ R + +  VV+LY FSSA+K  S
Sbjct: 433  NAYEGVSSKGKLEFIGSKTECALLNF-GKLFGCDYNEVRKRLE--VVELYPFSSARKRMS 489

Query: 361  VLIQLPDKLRLYNKGAAEWVLKRCIRCHTEAGIVEMTPALRGKLLDEVTNMAKRGLRCIC 540
            VL++    LRL+ KGA+E +L +C     EAG +      +    +++ N A   LR I 
Sbjct: 490  VLVKHDQNLRLFTKGASEIILGQCGSYLDEAGNIRPISEAKAYFEEQINNFASDALRTIG 549

Query: 541  LSYTDYPISDPSRPENFFEEADTVDDNLTCLGIVGIKDPVRAEVPLAVRTCKRAGIVVRM 720
            L+Y D+   +       F+E    ++NL  +GIVGIKDP+R EVP AV  CKRAGIVVRM
Sbjct: 550  LAYRDFQYGECD-----FKEPP--ENNLVFIGIVGIKDPLRPEVPEAVEICKRAGIVVRM 602

Query: 721  VTGDNIHTAQHIARECGILYDMGPNHPEHVAMEGPVFREM 840
            VTGDN+ TAQ+IAR CGIL + G      + MEGP FRE+
Sbjct: 603  VTGDNLVTAQNIARNCGILTEGG------LCMEGPKFREL 636



EST assemble image


clone accession position
1 MXL011a08_r BP093619 1 429
2 LCL097d11_r AV631641 86 501
3 MXL019b11_r BP094181 260 781
4 LCL001d10_r AV626036 282 814
5 LCL052c05_r AV629113 399 952




Chlamydomonas reinhardtii
Kazusa DNA Research Institute