>KCC003038A_C01 KCC003038A_c01
ttctaaatgcgtcgcgCCTTGATATTTTAATAGCTCACGACCATCCTACTTGATTCGCGA
CCTCCTGACTGGTTGAAGATACCTTTGCACAAATTTCCAGCAACCAGACCCCAAATACGT
CGCCAGTGTTATCTTAGACATAAACATCAACGCGCAACCTTGGCCTGGCTGCTTTGGCCT
CGCCAGAACGGTGCAACTCTGTCTTCCCCACTTGGGGTGTGAATTAAAACAAGCAGCATT
TCGCCATCAAGCATGAACTGCATATCACAACGGCTATGTTACTGCCGGTCGAGCGGCGTA
TAGCGCTGAGGCGCTAGGAGTGCGCATCTTAGGCAGGCACAGTCCGCG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003038A_C01 KCC003038A_c01
         (348 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00034343.1| COG0163: 3-polyprenyl-4-hydroxybenzoate decar...    30  6.7
gb|AAK18830.1|AF336151_1 epidermal growth factor precursor [Sus ...    30  6.7
ref|XP_328156.1| hypothetical protein [Neurospora crassa] gi|289...    30  6.7
gb|AAC14024.1| epidermal growth factor precursor [Sus scrofa]          30  6.7
pir||I58411 protein-tyrosine kinase (EC 2.7.1.112) brt - mouse g...    30  8.7

>ref|ZP_00034343.1| COG0163: 3-polyprenyl-4-hydroxybenzoate decarboxylase [Burkholderia
           fungorum]
          Length = 243

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 15/42 (35%), Positives = 24/42 (56%)
 Frame = -3

Query: 166 RPRLRVDVYV*DNTGDVFGVWLLEICAKVSSTSQEVANQVGW 41
           +P+ RV V +   TG ++GV LL+     S T+  V ++ GW
Sbjct: 46  KPQRRVVVAISGATGAIYGVRLLQALRACSVTTHLVVSRAGW 87

>gb|AAK18830.1|AF336151_1 epidermal growth factor precursor [Sus scrofa]
          Length = 1214

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 258  VHA*WRNAACFNSHPKWGRQSCTVLARPKQPGQGC 154
            VH    NA C N+    G  +CT   RP +PG+ C
Sbjct: 920  VHTCGENATCTNTE---GNYTCTCAGRPSEPGRIC 951

>ref|XP_328156.1| hypothetical protein [Neurospora crassa] gi|28917073|gb|EAA26795.1|
           hypothetical protein [Neurospora crassa]
          Length = 402

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 17/64 (26%), Positives = 34/64 (52%), Gaps = 2/64 (3%)
 Frame = +1

Query: 70  WLKIPLHKFPATRPQ--IRRQCYLRHKHQRATLAWLLWPRQNGATLSSPLGV*IKTSSIS 243
           W ++P  ++  +RP+  + RQ  +  +   + L + +WP  +  +LSS L    + S  +
Sbjct: 56  WSRLPPVQWSRSRPERAVARQVGIARRPSASRLFYFVWPATSQQSLSSDLDA--RNSGYT 113

Query: 244 PSSM 255
           PSS+
Sbjct: 114 PSSI 117

>gb|AAC14024.1| epidermal growth factor precursor [Sus scrofa]
          Length = 574

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 258 VHA*WRNAACFNSHPKWGRQSCTVLARPKQPGQGC 154
           VH    NA C N+    G  +CT   RP +PG+ C
Sbjct: 532 VHTCGENATCTNTE---GNYTCTCAGRPSEPGRIC 563

>pir||I58411 protein-tyrosine kinase (EC 2.7.1.112) brt - mouse
           gi|801868|dbj|BAA04216.1| protein tyrosine kinase [Mus
           musculus]
          Length = 856

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 70  WLKIPLHKFPATRPQIRRQCYLRHKHQRATLAWLLWPRQNGAT 198
           W+K   H+ P  +P +       H HQRA L WL  P+ +GA+
Sbjct: 62  WMK-GWHRGPECKPGV-------HLHQRAQLDWLTQPKVSGAS 96

  Database: nr
    Posted date:  Oct 14, 2003 12:26 AM
  Number of letters in database: 498,525,298
  Number of sequences in database:  1,537,769
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,582,494
Number of Sequences: 1537769
Number of extensions: 6625724
Number of successful extensions: 14253
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14252
length of database: 498,525,298
effective HSP length: 91
effective length of database: 358,588,319
effective search space used: 8606119656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 LCL058c03_r AV629408 1 232 2 LCL001b02_r AV626015 17 348 3 LCL096f09_r AV631597 78 259

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