Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003029A_C01 KCC003029A_c01
(423 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB78490.1| 26S proteasome regulatory particle non-ATPase su... 88 3e-17
ref|NP_176633.1| 26S proteasome regulatory subunit (RPN12), puta... 84 6e-16
gb|AAL72635.1|AF404120_1 proteasome regulatory non-ATP-ase subun... 52 1e-06
ref|NP_648904.1| CG4157-PA [Drosophila melanogaster] gi|6434966|... 49 2e-05
dbj|BAC34576.1| unnamed protein product [Mus musculus] 48 3e-05
>dbj|BAB78490.1| 26S proteasome regulatory particle non-ATPase subunit12 [Oryza
sativa (japonica cultivar-group)]
gi|34394724|dbj|BAC84087.1| 26S proteasome regulatory
particle non-ATPase subunit12 [Oryza sativa (japonica
cultivar-group)]
Length = 267
Score = 87.8 bits (216), Expect = 3e-17
Identities = 43/91 (47%), Positives = 59/91 (64%)
Frame = +3
Query: 144 LQEATALLGRFKDAIGKKDLSTADSLLGQLKVKLIQLPALPPTFEKSATAQQELLLGREV 323
L E T L RFK A + D T LL QLKV+L + P+LPP+F+++ A +EL + R++
Sbjct: 5 LVEVTQLFSRFKAAFARNDFDTCVDLLSQLKVRLTKFPSLPPSFQQTPNAVEELKIARDI 64
Query: 324 LEQAVLLSCKKQDEAAMERSFTQLRTYYNDT 416
E AV+LS K +D+ A ER F QL+ YY DT
Sbjct: 65 YEHAVVLSVKIEDQDAFERDFCQLKPYYMDT 95
>ref|NP_176633.1| 26S proteasome regulatory subunit (RPN12), putative [Arabidopsis
thaliana] gi|25338454|pir||H96668 protein F1N19.9
[imported] - Arabidopsis thaliana
gi|6633812|gb|AAF19671.1|AC009519_5 F1N19.9 [Arabidopsis
thaliana] gi|14532466|gb|AAK63961.1| At1g64520/F1N19_10
[Arabidopsis thaliana]
gi|15294148|gb|AAK95251.1|AF410265_1 At1g64520/F1N19_10
[Arabidopsis thaliana] gi|23505935|gb|AAN28827.1|
At1g64520/F1N19_10 [Arabidopsis thaliana]
Length = 267
Score = 83.6 bits (205), Expect = 6e-16
Identities = 43/92 (46%), Positives = 56/92 (60%)
Frame = +3
Query: 144 LQEATALLGRFKDAIGKKDLSTADSLLGQLKVKLIQLPALPPTFEKSATAQQELLLGREV 323
L E + RFK A +KD +T LL QLKV L + +LPP FE S A +EL + R++
Sbjct: 5 LTEVSQQFERFKAAFARKDYNTCSDLLSQLKVLLTKFTSLPPLFENSPNAAKELTIARDI 64
Query: 324 LEQAVLLSCKKQDEAAMERSFTQLRTYYNDTR 419
E AV+LS K +D+ A ER F QL+ YY D R
Sbjct: 65 YEHAVVLSVKTEDQDAFERDFFQLKPYYVDAR 96
>gb|AAL72635.1|AF404120_1 proteasome regulatory non-ATP-ase subunit 12 [Trypanosoma brucei]
Length = 274
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/81 (40%), Positives = 45/81 (54%)
Frame = +3
Query: 171 RFKDAIGKKDLSTADSLLGQLKVKLIQLPALPPTFEKSATAQQELLLGREVLEQAVLLSC 350
+ K A + + S +L+ LK +LI LP SAT +E+ L REVLE AVL+S
Sbjct: 20 KLKAAYDQNNDSLCLNLVNGLKKQLILLPTFLNPAAASATWLEEVTLTREVLEYAVLVSA 79
Query: 351 KKQDEAAMERSFTQLRTYYND 413
+ +D A+ E F QL YY D
Sbjct: 80 RLEDLASFELYFNQLSVYYTD 100
>ref|NP_648904.1| CG4157-PA [Drosophila melanogaster]
gi|6434966|gb|AAF08395.1|AF145314_1 26S proteasome
regulatory complex subunit p30 [Drosophila melanogaster]
gi|7294091|gb|AAF49445.1| CG4157-PA [Drosophila
melanogaster] gi|19527567|gb|AAL89898.1| RE36854p
[Drosophila melanogaster]
Length = 264
Score = 48.5 bits (114), Expect = 2e-05
Identities = 27/65 (41%), Positives = 39/65 (59%)
Frame = +3
Query: 219 LLGQLKVKLIQLPALPPTFEKSATAQQELLLGREVLEQAVLLSCKKQDEAAMERSFTQLR 398
LL QLKV L+++ LP + +++++L+L R VLE AV S +D A ER QL+
Sbjct: 28 LLDQLKVALVKMAFLPTDGNDAQSSKKQLILARSVLEVAVEHSVLSKDLLAFERYMAQLK 87
Query: 399 TYYND 413
YY D
Sbjct: 88 CYYYD 92
>dbj|BAC34576.1| unnamed protein product [Mus musculus]
Length = 289
Score = 48.1 bits (113), Expect = 3e-05
Identities = 33/92 (35%), Positives = 49/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 144 LQEATALLGRFKDAIGKKD--LSTADSLLGQLKVKLIQLPALPPTFEKSATAQQELLLGR 317
LQ A + + KD +K+ LS LG+LK+ L++L LP T K +Q+L+L R
Sbjct: 27 LQAAAGMYEQLKDEWNRKNPNLSKCGEELGRLKLVLLELNFLPTTGTK--LTKQQLILAR 84
Query: 318 EVLEQAVLLSCKKQDEAAMERSFTQLRTYYND 413
++LE S +D + ER QL+ YY D
Sbjct: 85 DILEIGAQWSILCKDIPSFERYMAQLKCYYFD 116
