Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003027A_C01 KCC003027A_c01
(605 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96DP5|FMT_HUMAN Methionyl-tRNA formyltransferase, mitochondr... 38 0.13
dbj|BAC83313.1| unknown protein [Oryza sativa (japonica cultivar... 36 0.49
ref|NP_519534.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solan... 35 0.63
ref|ZP_00019470.1| hypothetical protein [Chloroflexus aurantiacus] 35 0.83
pir||A45512 cold-regulated protein 1 - barley (fragment) 34 1.8
>sp|Q96DP5|FMT_HUMAN Methionyl-tRNA formyltransferase, mitochondrial precursor (MtFMT)
Length = 389
Score = 37.7 bits (86), Expect = 0.13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 576 LARRCWHPLLSRSARAGQPAPYWR 505
L RRCW P L+ AR G+P+P WR
Sbjct: 4 LVRRCWGPPLAHGARRGRPSPQWR 27
>dbj|BAC83313.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 171
Score = 35.8 bits (81), Expect = 0.49
Identities = 32/91 (35%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Frame = +1
Query: 172 SVLP*QSDV*VGSEPVLPVLPSSAEFCRVLPRPL----CCLTPELDKPAKSQRLRR---R 330
S P Q + G P L SS CR P P CCL P L PA LRR R
Sbjct: 48 SAPPRQPTLPPGVSP-LTARASSRAPCRPPPPPAVPATCCLLPRLPPPASCYHLRRCELR 106
Query: 331 KWSS*FRQANLSPLSQRSLRRMPSGRWPPPE 423
+ + + S S+R+ R+P PPPE
Sbjct: 107 RSETCLAMTSASSASRRTAPRVP----PPPE 133
>ref|NP_519534.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
gi|17428428|emb|CAD15115.1| PROBABLE TRANSMEMBRANE
PROTEIN [Ralstonia solanacearum]
Length = 184
Score = 35.4 bits (80), Expect = 0.63
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +3
Query: 228 SAEFCRVLPSSAEAIMLPN--ARAGQASEESATAQAEMEQLIQAGKLVATLSEKFKKDAK 401
+A+ R+ ++E I+ + A+A QA E+ A+ + E A KL A +S+K KD
Sbjct: 35 TAQEARIAAVNSERILRDSQPAKAAQAKLETEFAKRDRELQDMAAKLKA-MSDKLDKDTA 93
Query: 402 WTLAAARAITQITTAERSVIFASSEGRQLEFLNELANRELAGL 530
+ R Q A+ F + E LN+ N ELAG+
Sbjct: 94 VLADSDRTRRQRELADMDRDFQRKQREFREDLNQRRNEELAGV 136
>ref|ZP_00019470.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 391
Score = 35.0 bits (79), Expect = 0.83
Identities = 30/106 (28%), Positives = 46/106 (43%)
Frame = +3
Query: 255 SSAEAIMLPNARAGQASEESATAQAEMEQLIQAGKLVATLSEKFKKDAKWTLAAARAITQ 434
++AE A A A+EE A +AE A + VA + + +A+ AAARA+ +
Sbjct: 252 AAAEEQARREAEARAAAEEQARREAEARAAEAAARAVAEEQARREAEARAAEAAARAVAE 311
Query: 435 ITTAERSVIFASSEGRQLEFLNELANRELAGLRVQSATGAGASTGA 572
+ A++E R E A RE ++A A A A
Sbjct: 312 EQARREAEARAAAEER-ARLAEEQARREAEARAAEAAARAAAEEQA 356
>pir||A45512 cold-regulated protein 1 - barley (fragment)
Length = 164
Score = 33.9 bits (76), Expect = 1.8
Identities = 22/67 (32%), Positives = 33/67 (48%), Gaps = 1/67 (1%)
Frame = +1
Query: 406 RWPPPERLP-KSQLQSARSFSPVRKVASWSF*MNSPIGSWLACACRARQERVPAPARQTR 582
R PPP P ++L R+ SP+ + S + A AC+ ER+P P+R+ R
Sbjct: 40 RGPPPSPAPLPARLFPGRASSPLARTPS----------AGAASACKPLLERLPTPSRRRR 89
Query: 583 STRATSK 603
RAT +
Sbjct: 90 RRRATRR 96
