Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003020A_C01 KCC003020A_c01
(527 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC82365.1| unknown [Myxococcus xanthus] 48 9e-05
pir||S06705 hypothetical HTLV-1 related endogenous sequence HRES... 46 3e-04
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens] 46 3e-04
ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-... 45 4e-04
gb|AAD31829.1| NapG oxidoreductase [Streptomyces collinus] 45 6e-04
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 47.8 bits (112), Expect = 9e-05
Identities = 47/140 (33%), Positives = 55/140 (38%)
Frame = +3
Query: 36 PTPSTPRRRCSPTRAFCPRSSTWPSASSAWTSRTCQRRCASTCSPTCRAPAK*APAGCGA 215
P STP R C+P A PR PSA + RTC S+C+ C C
Sbjct: 110 PRKSTPTRCCTPCPA-PPRCRARPSAPAPSAGRTCPTAGPSSCASGC----------CPT 158
Query: 216 ARCATRWRAPRTGRRPRPAAPSQASR*PSRKRRPPSPCPRD*RRWSG*SRRRPALLRAAA 395
RC + AP G P A PS S+ PS P+P RR R P RA+A
Sbjct: 159 GRCGS---AP--GPTPHGAEPSPPSQSPS-----PAPASSGGRR-----RTHPRPARASA 203
Query: 396 WRPAAQTALSAARPLCCTAP 455
A L P CC P
Sbjct: 204 AGATAPACLPP--PRCCGRP 221
>pir||S06705 hypothetical HTLV-1 related endogenous sequence HRES1 25K - human
gi|38035|emb|CAA34646.1| p25 protein [Homo sapiens]
Length = 223
Score = 45.8 bits (107), Expect = 3e-04
Identities = 53/174 (30%), Positives = 62/174 (35%), Gaps = 14/174 (8%)
Frame = +3
Query: 6 PCSRRTPSWTPT---PSTPRRRCSPTRAFCPRSSTWPSASSAWTSRTCQRRCASTCSPTC 176
P R+P P P P R P RA R TWPSA+S W R SP
Sbjct: 46 PQDPRSPGPAPRHRRPPRPDPRAPPARASYRRFRTWPSATS-WERR--------RLSPGH 96
Query: 177 RAPAK*APA---GCGAARCATRWRAPRTGRRPRPAAPSQASR*PSRKRRPPSP------- 326
RA A+ PA G G R P R P P+ A++ S + P P
Sbjct: 97 RALARGPPARLGGEGPGAGDRRREGPDRSPRQPPVLPAAAAQPDSSSAQAPGPSTLRPAA 156
Query: 327 CPRD*RRWSG*SRRRPALLRAAAWRPAAQTALSAARPLCCTAPLSRTW-LWHSA 485
R RRW+ PA RA A + SA C W LW A
Sbjct: 157 TARRKRRWATRGPAHPAFARAHGEAGAGRVRTSARAGSTCAG-----WALWRCA 205
Score = 35.8 bits (81), Expect = 0.35
Identities = 29/90 (32%), Positives = 36/90 (39%), Gaps = 14/90 (15%)
Frame = -1
Query: 413 LGGWPPGCRPQKCRSSS*SPAPPPLVPWTRRWWPSFSAWSP-------TCLRWRRRAWAA 255
LGG PG ++ SP PP++P S SA +P R+R WA
Sbjct: 107 LGGEGPGAGDRRREGPDRSPRQPPVLPAAAAQPDSSSAQAPGPSTLRPAATARRKRRWAT 166
Query: 254 ARPWCPPARRASG-------RAAARWGSFC 186
P P RA G R +AR GS C
Sbjct: 167 RGPAHPAFARAHGEAGAGRVRTSARAGSTC 196
>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
Length = 250
Score = 45.8 bits (107), Expect = 3e-04
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Frame = +3
Query: 15 RRTPSWTPTPSTPRR---RCSPTRAFCPRSSTWPSASSAWTSRTCQRRCASTCSPTCRAP 185
R +P TP ++PRR R SPTRA PR+S + A +RT R + T +P +P
Sbjct: 132 RASPRRTPPRASPRRTPPRASPTRA-PPRASPKRTPPRASPTRT-PPRASPTRTPPTESP 189
Query: 186 AK*APAGCGA---ARCATRWRAPRTG--RRPRPAAPSQASR*PSRKRRPPSPCP 332
A+ P A +R + R PR R P A+P++ S KR PP+ P
Sbjct: 190 ARTPPTASPARTPSRASPRRMPPRASPTRTPPRASPTRTPPRASPKRTPPTASP 243
Score = 38.9 bits (89), Expect = 0.041
Identities = 43/122 (35%), Positives = 52/122 (42%), Gaps = 16/122 (13%)
Frame = +3
Query: 15 RRTPSWTPTPSTPRR---RCSPTRAFCPRSS---TWPSASSAWTSRT-CQRRCASTCSPT 173
R +P TP ++PRR R SP RA PR+S T P+AS T T R T SP
Sbjct: 51 RASPGRTPPRASPRRTPPRASPRRA-PPRASPRRTPPTASPTRTPPTESPARTPPTASPA 109
Query: 174 ---CRAPAK*APAGCGAARCATRWRAPRTGRRPRP------AAPSQASR*PSRKRRPPSP 326
RA + P R R RT R P A+P++A S KR PP
Sbjct: 110 RTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPRRTPPRASPTRAPPRASPKRTPPRA 169
Query: 327 CP 332
P
Sbjct: 170 SP 171
Score = 33.9 bits (76), Expect = 1.3
Identities = 38/113 (33%), Positives = 49/113 (42%), Gaps = 5/113 (4%)
Frame = +3
Query: 12 SRRTPSWTPTPSTPRRRCSPTRAFCPRSS---TWPSASSAWT-SRTCQRRCASTCSPTCR 179
+R P +P + P R SP R PR+S T P AS R RR T SPT R
Sbjct: 37 ARTPPRASPARTPP--RASPGRT-PPRASPRRTPPRASPRRAPPRASPRRTPPTASPT-R 92
Query: 180 APAK*APAGCGAARCATRWRAPRTGRRPRP-AAPSQASR*PSRKRRPPSPCPR 335
P +PA R + + RR P A+P++ S +R PP PR
Sbjct: 93 TPPTESPARTPPTASPARTPSRASPRRTPPRASPTRTPPRASPRRTPPRASPR 145
>ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Azotobacter vinelandii]
Length = 1459
Score = 45.4 bits (106), Expect = 4e-04
Identities = 59/179 (32%), Positives = 69/179 (37%), Gaps = 28/179 (15%)
Frame = +1
Query: 19 VRQAGRQRHQHLGAGAHLRGLSVRAHRRGLPRQAH---GPAVPVRGGARVRAHLRVARLQ 189
+R AGR G G RA L R+A G P G R RA R
Sbjct: 116 LRPAGRATGHRARRGPGAAGTVRRAGADPLRRRAADRGGHPAPPAGAGRPRAPGPAHRGP 175
Query: 190 NEPQRAAA-RPDARRAGGH-------QGRAAAHARRRHR----------KQVGDQAEKEG 315
QR A RP RRAGG Q RAA H R +HR + G +++
Sbjct: 176 GRSQRLRADRPRCRRAGGRHRRAQGRQPRAARHLRGQHRHPRGARRAPGRLAGAAVQRQC 235
Query: 316 HHRRV-HGTKGGGAGDQDDDRH--FCGRQPGG---QPPKQRSQPQGLYAARRH*A-GPG 471
R + H G G + DDRH GR G +PP R L ARR A GPG
Sbjct: 236 PGRVLPHRRDRHGGGRRPDDRHRAAAGRHGGAGRQRPPAARPTGAPLPVARRPKADGPG 294
Score = 34.7 bits (78), Expect = 0.78
Identities = 39/108 (36%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Frame = -1
Query: 335 PWTRRWWPSFSAWSPTCLRWRRRAWAAA----RPWCPPARRASGRAAARW---GSFCRRA 177
P R P+ +A P R RRR A A RP PA RA+G A R RRA
Sbjct: 81 PCRRHGPPTAAAGHPRGDRARRRTGARAAGGGRPELRPAGRATGHRARRGPGAAGTVRRA 140
Query: 176 TRR*ARTRAPPLTGTAGPCA*RGRPRR*ART-----ESPRR*APAPRC 48
R RA G P A GRPR S R A PRC
Sbjct: 141 GADPLRRRAADRGGHPAPPAGAGRPRAPGPAHRGPGRSQRLRADRPRC 188
Score = 31.6 bits (70), Expect = 6.6
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 1/130 (0%)
Frame = +1
Query: 13 QGVRQAGRQRHQHLGAGAHLRGLSVRAHRRGLPRQAHGPAVPVRGGARVRAHLRVARLQN 192
QG + GR+R G G LR L A RG Q
Sbjct: 353 QGQQPPGRRR---AGRGRRLRSLRPPASGRGAGCQG------------------------ 385
Query: 193 EPQRAAARPDARRAG-GHQGRAAAHARRRHRKQVGDQAEKEGHHRRVHGTKGGGAGDQDD 369
P+R R + RRAG G QGRA R R + DQ + HH ++ + GD
Sbjct: 386 -PRRQLRRAEERRAGRGRQGRAPV-LPGRCRDRRADQHRRRHHHLQLRRRQQVQDGDGRG 443
Query: 370 DRHFCGRQPG 399
H ++PG
Sbjct: 444 CVHRLEQRPG 453
>gb|AAD31829.1| NapG oxidoreductase [Streptomyces collinus]
Length = 341
Score = 45.1 bits (105), Expect = 6e-04
Identities = 37/102 (36%), Positives = 44/102 (42%), Gaps = 11/102 (10%)
Frame = +3
Query: 6 PCSRRTPSWTPTPSTPRRRCSPTRAF-----CPRSSTWPSASSAWTSRTCQRRC------ 152
PCS R S PS P R S T A PR + PS S+ RT +R C
Sbjct: 182 PCSARPRS--TRPSAPSRTTSSTPASGPRLPAPRGAASPSPSAPVGPRTRRRTCPWSGSR 239
Query: 153 ASTCSPTCRAPAK*APAGCGAARCATRWRAPRTGRRPRPAAP 278
A+ P C AP+ AP G + + RAP G P PA P
Sbjct: 240 AAPAPPNCAAPSASAPTGSPSPSSPSPGRAPPAG-CPSPAEP 280
