Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003017A_C01 KCC003017A_c01
(585 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG45120.1|AF310889_1 unknown [Dictyostelium discoideum] 35 1.0
ref|ZP_00094533.1| hypothetical protein [Novosphingobium aromati... 35 1.0
ref|ZP_00088552.1| COG0019: Diaminopimelate decarboxylase [Azoto... 33 2.2
ref|XP_305794.1| hypothetical protein XP_305794 [Homo sapiens] 33 2.9
emb|CAB62536.1| hypothetical protein [Enterobacter cloacae] 33 2.9
>gb|AAG45120.1|AF310889_1 unknown [Dictyostelium discoideum]
Length = 1220
Score = 34.7 bits (78), Expect = 1.0
Identities = 27/80 (33%), Positives = 37/80 (45%)
Frame = -2
Query: 524 PLRRSLRLSAVPNVPSRALTVTRPGNCKTLLQPAAPLIAR*FPTPSSSPVV*SPLFNNHQ 345
PL++S +A P+ P+ T T P A P +A PSS+P SPL Q
Sbjct: 804 PLKKSAAAAAPPSPPNEEATTTSPPTLA-----AKPKVAL-RNGPSSAPT--SPLSQPQQ 855
Query: 344 PAPSMTAAKNESANRTTSKQ 285
P P T +N S TT+ +
Sbjct: 856 PLPPSTHKRNLSNPNTTNNE 875
>ref|ZP_00094533.1| hypothetical protein [Novosphingobium aromaticivorans]
Length = 630
Score = 34.7 bits (78), Expect = 1.0
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = -2
Query: 551 PPGS*APSYPLRRSLRLSAVPNVPSRALTVTRPGNCKTLLQPAAPL--IAR*FPTPSSSP 378
PPG +P+ P R + + S P P A RP PAA + + P S+ P
Sbjct: 29 PPGFDSPATPARPAQQRSTAPAAPRLATPAARPSAASAPSSPAATSSPVVQPIPVSSAPP 88
Query: 377 VV*SPLFNNHQPA-----PSMTAAKNESA 306
V SPL + Q P++ A ESA
Sbjct: 89 PVQSPLGVSDQALLDSLDPALLAKLIESA 117
>ref|ZP_00088552.1| COG0019: Diaminopimelate decarboxylase [Azotobacter vinelandii]
Length = 1027
Score = 33.5 bits (75), Expect = 2.2
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = -2
Query: 521 LRRSL--RLSAVPNVPSRALTVTRPGNCKTLLQPAAPLIAR*FPTPSSSPVV*SPLFNNH 348
LRR+ RL+A+P VPSR T P L+ A P + R P P H
Sbjct: 459 LRRTAARRLAALP-VPSRRGARTAPAEHPARLRRARPALPRVGPRPG-----------RH 506
Query: 347 QPAPSMTAAKNESANRTTSKQLSLLKKRQ 261
Q P A + R +L+LL++RQ
Sbjct: 507 QAGPRALAGRAPRPPRRAHPRLALLRRRQ 535
>ref|XP_305794.1| hypothetical protein XP_305794 [Homo sapiens]
Length = 252
Score = 33.1 bits (74), Expect = 2.9
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 567 APPLHTAGELSPLIPTPPITPPFSRAECSLSCTDRHSARQL*NTAPACCP 418
A P HT+ SPL PP T P S A + C H +R+L P CP
Sbjct: 117 AQPAHTSTLGSPLPAPPPPTAPHSGA--APVCHQSHQSRRLHTPLPPSCP 164
>emb|CAB62536.1| hypothetical protein [Enterobacter cloacae]
Length = 101
Score = 33.1 bits (74), Expect = 2.9
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 249 CHVLLSFLQEGKLLARGAICAFVLGGGHRRCRLVIIEKRRSHYWRRRRRRKLASNQG 419
C + LS L RG CAF GG R +V E RSH+ R RRR L +G
Sbjct: 39 CRLFLSHAGACSLFLRG--CAFSAWGGKRLASVVKAE--RSHHGRERRRHPLGHVRG 91
