KCC003013A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003013A_C01 KCC003013A_c01
agagagagagggatagcaagcagcaggggttgctgggcgcccccggcttgcaaggatacc
tcccatgactcatgggggggCACTGCAGCTGTAAGGGGTGCAGGGATGGGCTGGCAGGCG
CATGCCAGTGCTCAGGTCGTGTTTGGACGTGGTGACAAGGGATCACTGACCCTCTCATGC
CCCGTTTGCGACCTAGCGACTTCGGCCACTGAAACCTTGCCTGCCTCCTCCCTGCCCTCT
GCTACTGCTGCCTCCTCCCTGCCTCCTCCCTGCTCCTGCGCAGCTACCTGAACGCGCTGT
TCGTGGTGGCTCGCTCCATCGGCCTGGTGGGGCACGCGCTGGACCAGAAGCGCCTGCAGC
AGCCGCTGTACCGCCACCCCTGGGAGGACGTGCTGTACACCAGCTAGGTGTGTGCGGAGG
CGGAGGGATGGAGGTGTGAGGAGGGATGTGGCGGCGGCTTGGCGGCTGGGGCGAATGGCG
CCGCGCACAGGAAGTCTGGGCGGCGGCCGTGCGGTCGGCGGGTGGTGGGCTGCTGATAAC
CCAGGGCTAGCATGCGAGCGAAGGCGGCGTTGGGCATGTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003013A_C01 KCC003013A_c01
         (581 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]            77  2e-13
ref|NP_187317.1| ATP citrate lyase -related [Arabidopsis thalian...    77  2e-13
ref|NP_199757.1| ATP citrate lyase [Arabidopsis thaliana] gi|975...    77  2e-13
gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]           77  2e-13
dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japoni...    77  2e-13

>emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 33/39 (84%), Positives = 36/39 (91%)
 Frame = +3

Query: 285 YLNALFVVARSIGLVGHALDQKRLQQPLYRHPWEDVLYT 401
           YLN LFV+ARSIGL+GH  DQKRL+QPLYRHPWEDVLYT
Sbjct: 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607

>ref|NP_187317.1| ATP citrate lyase -related [Arabidopsis thaliana]
           gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase,
           putative; 38389-41775 [Arabidopsis thaliana]
           gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase,
           putative; 3734-7120 [Arabidopsis thaliana]
           gi|27754223|gb|AAO22565.1| putative ATP citrate lyase
           [Arabidopsis thaliana]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 33/39 (84%), Positives = 36/39 (91%)
 Frame = +3

Query: 285 YLNALFVVARSIGLVGHALDQKRLQQPLYRHPWEDVLYT 401
           YLN LFV+ARSIGL+GH  DQKRL+QPLYRHPWEDVLYT
Sbjct: 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607

>ref|NP_199757.1| ATP citrate lyase [Arabidopsis thaliana] gi|9759429|dbj|BAB09916.1|
           ATP citrate lyase [Arabidopsis thaliana]
           gi|14334788|gb|AAK59572.1| putative ATP citrate lyase
           [Arabidopsis thaliana] gi|16648644|gb|AAL25638.1|
           ATP-citrate lyase subunit B [Arabidopsis thaliana]
           gi|17065616|gb|AAL33788.1| putative ATP citrate lyase
           [Arabidopsis thaliana]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 33/39 (84%), Positives = 36/39 (91%)
 Frame = +3

Query: 285 YLNALFVVARSIGLVGHALDQKRLQQPLYRHPWEDVLYT 401
           YLN LFV+ARSIGL+GH  DQKRL+QPLYRHPWEDVLYT
Sbjct: 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607

>gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 33/39 (84%), Positives = 36/39 (91%)
 Frame = +3

Query: 285 YLNALFVVARSIGLVGHALDQKRLQQPLYRHPWEDVLYT 401
           YLN LFV+ARSIGL+GH  DQKRL+QPLYRHPWEDVLYT
Sbjct: 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607

>dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japonica cultivar-group)]
           gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase
           [Oryza sativa (japonica cultivar-group)]
          Length = 608

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 33/39 (84%), Positives = 36/39 (91%)
 Frame = +3

Query: 285 YLNALFVVARSIGLVGHALDQKRLQQPLYRHPWEDVLYT 401
           YLN LFV+ARSIGL+GH  DQKRL+QPLYRHPWEDVLYT
Sbjct: 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607



EST assemble image


clone accession position
1 LC092b09_r AV625412 1 433
2 LC085c02_r AV624974 137 581




Chlamydomonas reinhardtii
Kazusa DNA Research Institute