KCC003012A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003012A_C01 KCC003012A_c01
tcattactacttgataagaatcacCAGCACTTGGGCGACCACAGCGAGCGAACGATTATT
CTTCACTGTTACGTTGCACTACATCTTGGCCCTGTTCCGATCAATCCCTAGGCTGCCGCA
CTAGTGCGATGGCTCTCGCCTCAGGCGTTGGCCGTCGCCAGCATGTGTCGGCCTCGCCCT
CGCGCAGTCGGGGTGTGCCAAGCCCACGCTTGAGCCCTGTCCACGCGAACGCGCCTGCGG
TTGCGGAGCGTCGCACAGAGCCCCTCTTAAAGCAGGAGCTGGTGGATTACCTGAAATCGG
GGTGTAGGCCTCGCAGCGCGTGGCGAATCGGCACCGAGCACGAGAAGCTGGGTTTCAACC
TGGCAGACAACAGCCGCATGAACTACGACCAGATTGCACAGGTGCTACGCAAGCTGGAGG
CCCGGTTTGGTTGGGAGCCCATCATGGAGGAGGGCCGTATCATCGGCGTGCAGTTGGATG
GTCAGAGTGTGACGCTGGAGCCCGGCGGCCAGTTTGAACTGAGCGGTGCTGCCCGTGGAG
ACCATTCACAAGACGTGTGCGGAGGTGAACAGCCACCTCTACCAGGTCAAGGCCATCTGC
GAGGAGCTTCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003012A_C01 KCC003012A_c01
         (611 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO45821.1| gamma-glutamylcysteine synthetase [Lotus cornicul...   123  4e-36
gb|AAF22137.1|AF128455_1 gamma-glutamylcysteine synthetase precu...   122  1e-35
gb|AAG13459.1|AF128453_1 gamma-glutamylcysteine synthetase precu...   120  3e-35
gb|AAF22136.1|AF128454_1 gamma-glutamylcysteine synthetase precu...   120  4e-35
sp|Q9ZNX6|GSH1_MEDTR Glutamate--cysteine ligase, chloroplast pre...   117  3e-34

>gb|AAO45821.1| gamma-glutamylcysteine synthetase [Lotus corniculatus var.
           japonicus]
          Length = 495

 Score =  123 bits (309), Expect(2) = 4e-36
 Identities = 69/132 (52%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
 Frame = +3

Query: 138 ASGVGRRQHVSASPSRSRGVPSPRLSPVHANAPAV-AERRTEPLLKQELVDYLKSGCRPR 314
           AS   +   V+AS S  RG    R   V A+ P   A   TEPL KQ+LVDYL SGC+P+
Sbjct: 23  ASHARKSSFVAASGSSRRG----RRLIVAASPPTEDAVVATEPLTKQDLVDYLASGCKPK 78

Query: 315 SAWRIGTEHEKLGFNLADNSRMNYDQIAQVLRKLEARFGWEPIMEEGRIIGVQLDGQSVT 494
             WRIGTEHEK GF L     M Y+QIA++L  +  RF W+ IME  +IIG++   QS++
Sbjct: 79  QNWRIGTEHEKFGFELGSLRPMKYEQIAELLNGIAERFDWDKIMEGDKIIGLKQGKQSIS 138

Query: 495 LEPGGQFELSGA 530
           LEPGGQFELSGA
Sbjct: 139 LEPGGQFELSGA 150

 Score = 50.1 bits (118), Expect(2) = 4e-36
 Identities = 20/26 (76%), Positives = 25/26 (95%)
 Frame = +1

Query: 532 PVETIHKTCAEVNSHLYQVKAICEEL 609
           P+ET+H+TCAEVNSHLYQVKA+ EE+
Sbjct: 151 PLETLHQTCAEVNSHLYQVKAVAEEM 176

>gb|AAF22137.1|AF128455_1 gamma-glutamylcysteine synthetase precursor [Pisum sativum]
          Length = 499

 Score =  122 bits (306), Expect(2) = 1e-35
 Identities = 64/132 (48%), Positives = 81/132 (60%)
 Frame = +3

Query: 135 LASGVGRRQHVSASPSRSRGVPSPRLSPVHANAPAVAERRTEPLLKQELVDYLKSGCRPR 314
           + S  GRR  V+ASP     V +                 TEPL KQ+L+DYL SGC+P+
Sbjct: 40  IVSSGGRRLIVAASPPTEDAVVA-----------------TEPLTKQDLIDYLASGCKPK 82

Query: 315 SAWRIGTEHEKLGFNLADNSRMNYDQIAQVLRKLEARFGWEPIMEEGRIIGVQLDGQSVT 494
             WRIGTEHEK GF L     + Y+QIA++L  +  RF WE IME  +IIG++   QS++
Sbjct: 83  DKWRIGTEHEKFGFELGSLRPVKYEQIAELLNAIAERFDWEKIMEGDKIIGLKQGKQSIS 142

Query: 495 LEPGGQFELSGA 530
           LEPGGQFELSGA
Sbjct: 143 LEPGGQFELSGA 154

 Score = 49.7 bits (117), Expect(2) = 1e-35
 Identities = 20/26 (76%), Positives = 25/26 (95%)
 Frame = +1

Query: 532 PVETIHKTCAEVNSHLYQVKAICEEL 609
           P+ET+H+TCAEVNSHLYQVKA+ EE+
Sbjct: 155 PLETLHQTCAEVNSHLYQVKAVTEEM 180

>gb|AAG13459.1|AF128453_1 gamma-glutamylcysteine synthetase precursor [Glycine max]
          Length = 308

 Score =  120 bits (302), Expect(2) = 3e-35
 Identities = 62/127 (48%), Positives = 79/127 (61%)
 Frame = +3

Query: 150 GRRQHVSASPSRSRGVPSPRLSPVHANAPAVAERRTEPLLKQELVDYLKSGCRPRSAWRI 329
           GRR  V+ASP     V +                 T+PL KQ+LVDYL SGC+P+  WRI
Sbjct: 50  GRRVIVAASPPTEDAVVA-----------------TDPLTKQDLVDYLASGCKPKDKWRI 92

Query: 330 GTEHEKLGFNLADNSRMNYDQIAQVLRKLEARFGWEPIMEEGRIIGVQLDGQSVTLEPGG 509
           GTEHEK GF +     M YDQIA++L  +  RF W+ +ME  +IIG++   QS++LEPGG
Sbjct: 93  GTEHEKFGFEIGSLRPMKYDQIAELLNGIAERFDWDKVMEGDKIIGLKQGKQSISLEPGG 152

Query: 510 QFELSGA 530
           QFELSGA
Sbjct: 153 QFELSGA 159

 Score = 50.1 bits (118), Expect(2) = 3e-35
 Identities = 20/26 (76%), Positives = 25/26 (95%)
 Frame = +1

Query: 532 PVETIHKTCAEVNSHLYQVKAICEEL 609
           P+ET+H+TCAEVNSHLYQVKA+ EE+
Sbjct: 160 PLETLHQTCAEVNSHLYQVKAVAEEM 185

>gb|AAF22136.1|AF128454_1 gamma-glutamylcysteine synthetase precursor [Phaseolus vulgaris]
          Length = 508

 Score =  120 bits (300), Expect(2) = 4e-35
 Identities = 68/164 (41%), Positives = 89/164 (53%)
 Frame = +3

Query: 39  PQRANDYSSLLRCTTSWPCSDQSLGCRTSAMALASGVGRRQHVSASPSRSRGVPSPRLSP 218
           P+R  D  +      ++ CS+     + S        G R  V+ASP     V +     
Sbjct: 17  PRRHFDGQTKASAPNTFSCSNWDSAKKLSPTQRIVTRGGRVIVAASPPTEDAVVA----- 71

Query: 219 VHANAPAVAERRTEPLLKQELVDYLKSGCRPRSAWRIGTEHEKLGFNLADNSRMNYDQIA 398
                       T+PL KQ+LVDYL SGC+PR  WRIGTEHEK GF       M Y+QIA
Sbjct: 72  ------------TDPLTKQDLVDYLASGCKPREKWRIGTEHEKFGFEFGSLRPMKYEQIA 119

Query: 399 QVLRKLEARFGWEPIMEEGRIIGVQLDGQSVTLEPGGQFELSGA 530
           ++L  +  RF W+ IME  +IIG++   QS++LEPGGQFELSGA
Sbjct: 120 ELLNGIAERFDWDKIMEGDKIIGLKQGKQSISLEPGGQFELSGA 163

 Score = 50.1 bits (118), Expect(2) = 4e-35
 Identities = 20/26 (76%), Positives = 25/26 (95%)
 Frame = +1

Query: 532 PVETIHKTCAEVNSHLYQVKAICEEL 609
           P+ET+H+TCAEVNSHLYQVKA+ EE+
Sbjct: 164 PLETLHQTCAEVNSHLYQVKAVAEEM 189

>sp|Q9ZNX6|GSH1_MEDTR Glutamate--cysteine ligase, chloroplast precursor
           (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS)
           gi|3941322|gb|AAC82334.1| gamma-glutamylcysteine
           synthetase [Medicago truncatula]
          Length = 508

 Score =  117 bits (293), Expect(2) = 3e-34
 Identities = 62/132 (46%), Positives = 79/132 (58%)
 Frame = +3

Query: 135 LASGVGRRQHVSASPSRSRGVPSPRLSPVHANAPAVAERRTEPLLKQELVDYLKSGCRPR 314
           L SG  RR  V+ASP     V +                 TEPL KQ+L+DYL SGC+ +
Sbjct: 49  LTSGGSRRFIVAASPPTEDAVVA-----------------TEPLTKQDLIDYLASGCKTK 91

Query: 315 SAWRIGTEHEKLGFNLADNSRMNYDQIAQVLRKLEARFGWEPIMEEGRIIGVQLDGQSVT 494
             WRIGTEHEK GF L     M Y+QI+++L  +  RF W+ +ME   IIG++   QS++
Sbjct: 92  DKWRIGTEHEKFGFELGSLRPMKYEQISELLNGIAERFDWDKVMEGDNIIGLKQGKQSIS 151

Query: 495 LEPGGQFELSGA 530
           LEPGGQFELSGA
Sbjct: 152 LEPGGQFELSGA 163

 Score = 50.1 bits (118), Expect(2) = 3e-34
 Identities = 20/26 (76%), Positives = 25/26 (95%)
 Frame = +1

Query: 532 PVETIHKTCAEVNSHLYQVKAICEEL 609
           P+ET+H+TCAEVNSHLYQVKA+ EE+
Sbjct: 164 PLETLHQTCAEVNSHLYQVKAVAEEM 189



EST assemble image


clone accession position
1 LC085b02_r AV624963 1 455
2 LCL046g07_r AV628768 25 526
3 MXL065b11_r BP096806 52 428
4 MX255c11_r BP092521 377 612




Chlamydomonas reinhardtii
Kazusa DNA Research Institute