Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003010A_C01 KCC003010A_c01
(640 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB53759.1| SCO-spondin [Bos taurus] 38 0.14
ref|NP_777131.1| SCO-spondin [Bos taurus] gi|20145484|emb|CAC949... 38 0.14
emb|CAD36365.1| gp120 protein [Human immunodeficiency virus 1] 37 0.24
pir||C72619 hypothetical protein APE1412 - Aeropyrum pernix (str... 36 0.54
ref|NP_811824.1| putative glycosyslhydrolase [Bacteroides thetai... 35 0.71
>emb|CAB53759.1| SCO-spondin [Bos taurus]
Length = 685
Score = 37.7 bits (86), Expect = 0.14
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 186 SMPCEDSGPSHGPHHAWKVCRARCSALLQSLVCWLSAAPRAAAAPVRNSMTPPSRPALCP 7
S PC++ P+ P W C A C + + + P A + + + S P LCP
Sbjct: 259 SWPCKEGQPTWSPWTPWSECSASCGPARRHKHRFCTRPPGGAPSSMAPPLLLSSVPPLCP 318
Query: 6 GP 1
GP
Sbjct: 319 GP 320
>ref|NP_777131.1| SCO-spondin [Bos taurus] gi|20145484|emb|CAC94914.1| SCO-spondin [Bos
taurus]
Length = 5146
Score = 37.7 bits (86), Expect = 0.14
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 186 SMPCEDSGPSHGPHHAWKVCRARCSALLQSLVCWLSAAPRAAAAPVRNSMTPPSRPALCP 7
S PC++ P+ P W C A C + + + P A + + + S P LCP
Sbjct: 3156 SWPCKEGQPTWSPWTPWSECSASCGPARRHKHRFCTRPPGGAPSSMAPPLLLSSVPPLCP 3215
Query: 6 GP 1
GP
Sbjct: 3216 GP 3217
>emb|CAD36365.1| gp120 protein [Human immunodeficiency virus 1]
Length = 196
Score = 37.0 bits (84), Expect = 0.24
Identities = 17/39 (43%), Positives = 25/39 (63%)
Frame = +3
Query: 63 QRVGQRTANTPVTGEVRCNAPYTLSMRDVDRGLVLSPHK 179
QRVGQ P+ G++RCN+P T + D G+V SP++
Sbjct: 154 QRVGQAIYAPPIQGKIRCNSPITGLLLTRDGGVVNSPNE 192
>pir||C72619 hypothetical protein APE1412 - Aeropyrum pernix (strain K1)
gi|5105095|dbj|BAA80409.1| 156aa long hypothetical
protein [Aeropyrum pernix]
Length = 156
Score = 35.8 bits (81), Expect = 0.54
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = -2
Query: 327 SRAKYAHTGTATYYQTLTRSRMCTLASTLSKDVSGR*P----PTTMNAVYVSMPCEDSGP 160
S A+ TG+A Y M T +S + K + G P P + NA VS P
Sbjct: 40 SAARPPITGSALY-------AMATTSSLVKKPLKGGTPARLSPASQNAAAVSFMYLAKPP 92
Query: 159 SHGPHHAWKVC----RARCSALLQSLVCWLSAAPR--AAAAPVRNSMTPPSR 22
+ W C AR SA L++ WL+ PR A A+P + +PP+R
Sbjct: 93 ILSMNLLWAACITHPAARNSAALKT--AWLTRWPRPAATASPASSRASPPAR 142
>ref|NP_811824.1| putative glycosyslhydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|29340225|gb|AAO78018.1| putative glycosyslhydrolase
[Bacteroides thetaiotaomicron VPI-5482]
Length = 1544
Score = 35.4 bits (80), Expect = 0.71
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Frame = +2
Query: 11 HRAGRDGGVIELRTGAAAARGAADSQHTSDW------------RSALQRALHT---FHA* 145
HR G GGV L G +GA + +S+W R + +H + +
Sbjct: 393 HRIGV-GGVFNLEGGTGIPKGAV-TYLSSEWSELKAHAVKEAARLGIDYVMHNCPGWSSS 450
Query: 146 CGPWLGPESSQGMLTYTAFMVVGGYLPDTSL 238
GPW+ PE S LT++ VVGG DT L
Sbjct: 451 GGPWITPEYSMQKLTWSEIEVVGGEQIDTLL 481