KCC003002A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003002A_C01 KCC003002A_c01
ctacctcaacttactgcagtCTCAGCGCAGGAACAACCCCTTCCTTGAACTACAACTCGA
GCATTGTTTTCTGCAATACTTCAGTTTGTTCCAGGCGCGGCTTCAGAAATGTCAAATCGA
CCATGCATATTGCACACACGGCGTTATCGGGCGGTATATGAGGGCCTGGTGAACACGCTT
CGGGACGCGAATGCACTGCAGCCTAACCAGCTCGCTCGGCTGAAGGAGCTGCAACACAGC
TTTTGCAGCTGCAGCGAGGGTACACTACCTGCCCTTGGTGCTGGCGACTCGGGCGCAAGC
CCAAGCCTCGCTGCGGCAACGCCAGCTGCGGACCCAGCGGCCTCCCCACTCACCTCCCCA
GAGCAGCCTCAGCCGCCACAGCAGCAGCCGTCGGGCTGGCGCACGGCGCTGCAGGGCGCC
CAGGCGCAGCTGCTACATCTGGCGCAGCGGCAGGGCGACGCGGCGGTGGAGGTGATGGCG
ACCGCGGTCCAGCGCCTTGGGGGCGTGGTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003002A_C01 KCC003002A_c01
         (511 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA85167.1| dopamine receptor D4 [Hylobates lar]                   56  3e-07
dbj|BAA85168.1| dopamine receptor D4 [Hylobates pileatus]              55  5e-07
dbj|BAA85174.1| dopamine receptor D4 [Hylobates muelleri]              55  7e-07
dbj|BAA85172.1| dopamine receptor D4 [Hylobates moloch] gi|60154...    55  7e-07
sp|P21917|D4DR_HUMAN D(4) dopamine receptor (D(2C) dopamine rece...    54  9e-07

>dbj|BAA85167.1| dopamine receptor D4 [Hylobates lar]
          Length = 169

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 47/128 (36%), Positives = 52/128 (39%), Gaps = 6/128 (4%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRP--AAAPDVA-AAPGRPAAPCASPTAAAVAAEAALGR*VGR 341
           P RP G GP SP+PP PR P     PD A  APG P  PC SP  A++A     G     
Sbjct: 19  PRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPQGPC-SPDCASLAPALPQG----- 72

Query: 340 PLGPQLALPQRGLGLRPSRQHQGQVV--YPRCSC-KSCVAAPSAERAG*AAVHSRPEACS 170
           P  P  A P  GL   PS           PR  C   C  A      G  +    P    
Sbjct: 73  PYNPDCAPPAPGLPRGPSGPDCAHSAPGLPRGPCGPDCAPAVPGLPWGPCS----PNCTV 128

Query: 169 PGPHIPPD 146
           P P +PPD
Sbjct: 129 PAPGLPPD 136

>dbj|BAA85168.1| dopamine receptor D4 [Hylobates pileatus]
          Length = 169

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 47/128 (36%), Positives = 50/128 (38%), Gaps = 6/128 (4%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRP--AAAPDVA-AAPGRPAAPCASPTAAAVAAEAALGR*VGR 341
           P RP G GP SP+PP PR P     PD A  APG P  PC SP  A+ A     G     
Sbjct: 19  PRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPQGPC-SPDCASPAPALPQG----- 72

Query: 340 PLGPQLALPQRGLGLRPSRQHQGQVV--YPRCSC-KSCVAAPSAERAG*AAVHSRPEACS 170
           P  P  ALP  GL   P            PR  C   C  A      G       P    
Sbjct: 73  PYDPNCALPAPGLPRGPCGPDCAHSAPGLPRGPCGPDCAPAVPGLPWGPCG----PNCAV 128

Query: 169 PGPHIPPD 146
           P P +PPD
Sbjct: 129 PAPGLPPD 136

>dbj|BAA85174.1| dopamine receptor D4 [Hylobates muelleri]
          Length = 153

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 44/125 (35%), Positives = 49/125 (39%), Gaps = 3/125 (2%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRP--AAAPDVA-AAPGRPAAPCASPTAAAVAAEAALGR*VGR 341
           P RP G GP SP+PP PR P     PD A  APG P  PC SP  A+ A     G     
Sbjct: 19  PRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPQGPC-SPDCASPAPALPQG----- 72

Query: 340 PLGPQLALPQRGLGLRPSRQHQGQVVYPRCSCKSCVAAPSAERAG*AAVHSRPEACSPGP 161
           P  P  A P  GL   P            C      +AP   R         P+   P P
Sbjct: 73  PYDPDCAPPAPGLPRGP------------CGPDCAHSAPGLPRG-----PCGPDCAVPAP 115

Query: 160 HIPPD 146
            +PPD
Sbjct: 116 GLPPD 120

>dbj|BAA85172.1| dopamine receptor D4 [Hylobates moloch] gi|6015460|dbj|BAA85173.1|
           dopamine receptor D4 [Hylobates klossii]
          Length = 153

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 44/125 (35%), Positives = 49/125 (39%), Gaps = 3/125 (2%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRP--AAAPDVA-AAPGRPAAPCASPTAAAVAAEAALGR*VGR 341
           P RP G GP SP+PP PR P     PD A  APG P  PC SP  A+ A     G     
Sbjct: 19  PRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPQGPC-SPDCASPAPALPQG----- 72

Query: 340 PLGPQLALPQRGLGLRPSRQHQGQVVYPRCSCKSCVAAPSAERAG*AAVHSRPEACSPGP 161
           P  P  A P  GL   P            C      +AP   R         P+   P P
Sbjct: 73  PYDPDCAPPAPGLPRGP------------CGPDCAHSAPGLPRG-----PCGPDCAVPAP 115

Query: 160 HIPPD 146
            +PPD
Sbjct: 116 GLPPD 120

>sp|P21917|D4DR_HUMAN D(4) dopamine receptor (D(2C) dopamine receptor)
           gi|291946|gb|AAB59386.1| dopamine receptor D4 [Homo
           sapiens] gi|4325160|gb|AAD17291.1| dopamine receptor
           D4-7 [synthetic construct]
          Length = 467

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 44/127 (34%), Positives = 48/127 (37%), Gaps = 5/127 (3%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRP--AAAPDVA-AAPGRPAAPCASPTAAAVAAEAALGR*VGR 341
           P RP G GP SP+PP PR P     PD A  APG P  PC    A A             
Sbjct: 235 PRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPRGPCGPDCAPAAPGLPP------D 288

Query: 340 PLGPQLALPQRGLGLRPSRQHQGQVV--YPRCSCKSCVAAPSAERAG*AAVHSRPEACSP 167
           P GP  A P  GL   P            PR  C    A P+    G       P+   P
Sbjct: 289 PCGPDCAPPAPGLPQDPCGPDCAPPAPGLPRGPCGPDCAPPA---PGLPQDPCGPDCAPP 345

Query: 166 GPHIPPD 146
            P +PPD
Sbjct: 346 APGLPPD 352

 Score = 31.2 bits (69), Expect = 7.9
 Identities = 18/50 (36%), Positives = 20/50 (40%)
 Frame = -1

Query: 511 PPRPQGAGPRSPSPPPPRRPAAAPDVAAAPGRPAAPCASPTAAAVAAEAA 362
           P  P G     P+P  P+ P        APG P  PC S  A   A  AA
Sbjct: 318 PRGPCGPDCAPPAPGLPQDPCGPDCAPPAPGLPPDPCGSNCAPPDAVRAA 367



EST assemble image


clone accession position
1 LCL044f04_r AV628620 1 270
2 LCL026c01_r AV627401 21 239
3 MXL068a12_r BP096976 30 410
4 LCL065d08_r AV629757 33 501
5 LC079h05_r AV624594 39 511
6 LCL078g12_r AV630438 58 354
7 LCL066e05_r AV629808 74 480
8 LCL020d11_r AV627058 126 412




Chlamydomonas reinhardtii
Kazusa DNA Research Institute