Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003001A_C01 KCC003001A_c01
(740 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198866.2| expressed protein [Arabidopsis thaliana] gi|176... 79 6e-14
emb|CAD41106.1| OSJNBb0011N17.23 [Oryza sativa (japonica cultiva... 79 6e-14
ref|NP_824148.1| putative 2-oxoglutarate dehydrogenase [Streptom... 50 5e-05
pir||I50674 retinoic acid receptor alpha isoform 2-1 - chicken g... 45 0.001
gb|AAM08531.1|AC079935_3 Hypothetical protein [Oryza sativa] gi|... 45 0.002
>ref|NP_198866.2| expressed protein [Arabidopsis thaliana] gi|17644175|gb|AAL38785.1|
unknown protein [Arabidopsis thaliana]
gi|21436195|gb|AAM51385.1| unknown protein [Arabidopsis
thaliana]
Length = 123
Score = 79.3 bits (194), Expect = 6e-14
Identities = 36/77 (46%), Positives = 51/77 (65%)
Frame = +2
Query: 419 YEVQVVTPPPRSLGIYALPPNTQCGEEIDVEGQGYVVTTVVLQYKLRGGKYVRHHNRLDV 598
Y+V +TPPP+SLGI LP N QCGE + +EGQ Y ++ V +Y+LR GKY RLDV
Sbjct: 45 YKVIEITPPPKSLGIRCLPHNLQCGENVMIEGQTYTISAVTHRYQLRKGKYEPSERRLDV 104
Query: 599 QPTGRWLVNQMLENLIK 649
R+++N +NL++
Sbjct: 105 LSAARYVLNLYFDNLLQ 121
>emb|CAD41106.1| OSJNBb0011N17.23 [Oryza sativa (japonica cultivar-group)]
gi|32488468|emb|CAE03139.1| OSJNBa0081L15.1 [Oryza
sativa (japonica cultivar-group)]
Length = 125
Score = 79.3 bits (194), Expect = 6e-14
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = +2
Query: 395 KRAKQPGLYEVQVVTPPPRSLGIYALPPNTQCGEEIDVEGQGYVVTTVVLQYKLRGGKYV 574
K K P ++V +TPPPR LG+ P N CGE + +EGQ Y V+ V +Y+LR G+Y
Sbjct: 41 KEHKYP--FKVVEITPPPRCLGVRCFPTNIHCGESVTIEGQAYTVSAVTHRYQLRKGRYE 98
Query: 575 RHHNRLDVQPTGRWLVNQMLENLI 646
RLDV TGR+L+N L+ L+
Sbjct: 99 PSEKRLDVLSTGRYLLNLYLDGLL 122
>ref|NP_824148.1| putative 2-oxoglutarate dehydrogenase [Streptomyces avermitilis
MA-4680] gi|29606622|dbj|BAC70683.1| putative
2-oxoglutarate dehydrogenase [Streptomyces avermitilis
MA-4680]
Length = 1276
Score = 49.7 bits (117), Expect = 5e-05
Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Frame = -1
Query: 617 ASAPWAARLAGCGDVRTCLRAACTAALPSSPRIPAPPRRSPPRTACWGAARRCLASEAAE 438
ASAP AG + T AA TAA P++P PAP +P A AA + AA
Sbjct: 64 ASAPAGTAAAGAAETTTPAPAAPTAAAPAAPAAPAPAAPAPAPAAPAPAAAPAVPKPAAA 123
Query: 437 SPLAPRRGPAASPSCPPHFQALTLACCCCSGRQRGRAQGPVLSTG---------PPPTSA 285
+P PAA+ P A T A G +GP + P TS
Sbjct: 124 APAPAAAKPAAAAPAQPKAAAATEA---AEGPTFVPLRGPAAAVAKNMNASIEVPTATSV 180
Query: 284 RVAPVSLM 261
R PV L+
Sbjct: 181 RAVPVKLL 188
>pir||I50674 retinoic acid receptor alpha isoform 2-1 - chicken
gi|1089846|emb|CAA55134.1| retinoic acid recptor alpha
isoform 2-1 [Gallus gallus]
Length = 453
Score = 45.1 bits (105), Expect = 0.001
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = -1
Query: 641 GSQASGSPASAPWAARLAGCGDVRTCLRAACTAALPSSPRIPAPPRRSPPRTACWGAARR 462
G++ +G P P R+ CG R CL C P PPR +P R WGA+ R
Sbjct: 4 GAEVAGLPPPGP-LPRMDCCGPGRGCLLPQC----------PPPPRTAPRRAPHWGASGR 52
Query: 461 CLASEAAES-PLAPRRGPAASPSCPPHFQALTLACCCCSGRQRGRAQG 321
+ +++ S + P SP PP + C C + G G
Sbjct: 53 SVETQSTSSEEIVP------SPPSPPPLPRIYKPCFVCQDKSSGYHYG 94
>gb|AAM08531.1|AC079935_3 Hypothetical protein [Oryza sativa]
gi|19920232|gb|AAM08664.1|AC113338_20 Hypothetical
protein [Oryza sativa (japonica cultivar-group)]
gi|31431676|gb|AAP53420.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 492
Score = 44.7 bits (104), Expect = 0.002
Identities = 36/100 (36%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = -1
Query: 632 ASGSPASAPWAARLAGCGDVRTCLRAACTAALPSSPRI--PAPPRRSPPRTACWGAARRC 459
AS +PAS A + C AC A+ P PR+ PA PPR AR
Sbjct: 386 ASSTPASRLAATLATLLPRLLRCPHRACPAS-PPPPRLLRPATLASPPPRLLRHRRARLS 444
Query: 458 LASEAAESPLAPRRGPAASPSCPPHFQALTLACCCCSGRQ 339
A A SPL P AA+ + P A AC CC GR+
Sbjct: 445 AAPTALVSPLPPLLSTAAA-AASPRLAAADSACACCLGRR 483
