Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002999A_C01 KCC002999A_c01
(596 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 ... 47 2e-04
emb|CAE05530.1| OSJNBa0053B21.4 [Oryza sativa (japonica cultivar... 47 2e-04
ref|NP_612406.1| hypothetical protein BC012317 [Homo sapiens] gi... 39 7e-04
ref|NP_733671.1| probable translational initiation factor [Strep... 45 8e-04
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 45 8e-04
>pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 (strain F)
gi|330123|gb|AAA45794.1| infected cell protein
Length = 358
Score = 47.0 bits (110), Expect = 2e-04
Identities = 54/162 (33%), Positives = 61/162 (37%), Gaps = 6/162 (3%)
Frame = -3
Query: 588 PASRAPPAAR*VSAGPPQPAHPPYPGRPHCRRT------*PWPVR*RCDPRRRGQWPPSP 427
PA+ A PA A P PA P P R R T W R RG
Sbjct: 180 PATPATPATPATPATPATPATPATPARVRSRPTVRVRHLVVWASAARLRAAARGPASGPT 239
Query: 426 GPG*GAPRARPSRRY*GRRGRTAATWSCKWRGACCA*APPASGPARPTPSPGRPHSWSPA 247
G G GA RP RR GR W C P +GPAR T S P + A
Sbjct: 240 GLGSGAGWRRP-RRSSGR----------AWGPGPCRALP--AGPARRTRSNVTPEA---A 283
Query: 246 QSSSRHRGEPLHTAQDGRGAGEVDLAWRSEPRLAAPGPPTRG 121
SS+ R +PL DGR + R EP GPP+ G
Sbjct: 284 WSSAELRTKPLSRRDDGRSRAYI----RWEPARPRGGPPSEG 321
Score = 34.3 bits (77), Expect = 1.4
Identities = 41/147 (27%), Positives = 48/147 (31%), Gaps = 12/147 (8%)
Frame = -3
Query: 588 PASRAPPAAR*VSAGPPQPAHPPYPGRPHCRRT*PWPVR*RCDPRRRGQWP----PSPGP 421
PA R+ PAA A PP PA P P R D WP P P P
Sbjct: 52 PAVRSAPAA----APPPPPASGPPPSCSLLLRQWLHVPESASDDDDDDDWPDSPPPEPAP 107
Query: 420 G*GAPRARPSRRY*GRRGRTAATWSCKWRGACCA*APPASGP---ARPTPSPGRPHSWSP 250
G P A P R PP +GP A P+ P RP P
Sbjct: 108 EAGPPAAAPRPRS----------------------PPPGAGPGGGANPSHPPSRPFRLPP 145
Query: 249 -----AQSSSRHRGEPLHTAQDGRGAG 184
+ ++ H A+ G GAG
Sbjct: 146 RLALRLRVTAEHLARLRRDARAGGGAG 172
>emb|CAE05530.1| OSJNBa0053B21.4 [Oryza sativa (japonica cultivar-group)]
gi|32490008|emb|CAE05038.1| OSJNBa0044M19.25 [Oryza
sativa (japonica cultivar-group)]
Length = 1802
Score = 47.0 bits (110), Expect = 2e-04
Identities = 51/172 (29%), Positives = 73/172 (41%), Gaps = 12/172 (6%)
Frame = +2
Query: 35 IFQAFGPNSLQQAVHISQNQDNASTKTAIPRVGGPGAARRGSERHAKSTSP--APRPSWA 208
++ A P + A+ + +++DN ++A P P + R G E+ ++ P PRP A
Sbjct: 1002 LYLAATPQVVSAALVVERDEDNP--RSAHPH---PVSTRPGREQGGEAPEPNGGPRPPTA 1056
Query: 209 VCSGSPRCRLELCAGDHE*GRPGLGVGR-----AGPEAGGAQAQHAPRHLQD--HVAAVL 367
P C A D + G PG GR + PE G +A+ APR L D H +
Sbjct: 1057 GAGPLPACPTVPGAPDPQDG-PGATAGRPRLSPSDPEVVGTEAECAPRGLSDEEHPVSTR 1115
Query: 368 PRRPQ*RREGLARGAPQP---GPGLGGHCPRRRGSHLHRTGQGQVRRQ*GRP 514
P R Q G P+P G G CP G+ + G G GRP
Sbjct: 1116 PGREQGGEAPEPNGGPRPPTTGAGPLPACPTVPGAPDPQDGPGATA---GRP 1164
>ref|NP_612406.1| hypothetical protein BC012317 [Homo sapiens]
gi|15147367|gb|AAH12317.1| Hypothetical protein BC012317
[Homo sapiens]
Length = 137
Score = 39.3 bits (90), Expect(2) = 7e-04
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Frame = +1
Query: 265 RTARAGCGTSWARSWWGSSTARPAPLARPRRCCPTAATSVAARRPCA---------WSAS 417
R A ++WA W + A P P RP C PT + RPC WSAS
Sbjct: 48 RRAAGAAASAWASRAW-TPRACPCPACRPS-CAPTWRSRARRGRPCCLRAARSLGTWSAS 105
Query: 418 TWTWAGRPLPAAPRIAPS------PDWPRS 489
WT A P + A S P PRS
Sbjct: 106 GWTAAAASSPRSTPAAGSCCVRACPSAPRS 135
Score = 25.4 bits (54), Expect(2) = 7e-04
Identities = 15/32 (46%), Positives = 17/32 (52%)
Frame = +2
Query: 137 PGAARRGSERHAKSTSPAPRPSWAVCSGSPRC 232
P A R R A S + APR + A CS S RC
Sbjct: 4 PRAHRCVWTRVAASRTGAPRSTTASCSASGRC 35
>ref|NP_733671.1| probable translational initiation factor [Streptomyces coelicolor
A3(2)] gi|24413891|emb|CAD55362.1| probable
translational initiation factor [Streptomyces coelicolor
A3(2)]
Length = 1033
Score = 45.1 bits (105), Expect = 8e-04
Identities = 50/158 (31%), Positives = 57/158 (35%), Gaps = 1/158 (0%)
Frame = +2
Query: 122 PRVGGPGAARRGSERHAKSTSPAPRPSW-AVCSGSPRCRLELCAGDHE*GRPGLGVGRAG 298
PR GGPG A G PRP G PR + P G AG
Sbjct: 243 PRPGGPGGAPGGG----------PRPQGPGGQGGGPRPQAPGGNRPSPGSMPRPQGGGAG 292
Query: 299 PEAGGAQAQHAPRHLQDHVAAVLPRRPQ*RREGLARGAPQPGPGLGGHCPRRRGSHLHRT 478
P GG + ++P+RP P+PGPG GG P G R
Sbjct: 293 PRPGGGPRPNP---------GMMPQRPA--------AGPRPGPGGGGRGPGGAG----RP 331
Query: 479 GQGQVRRQ*GRPGYGGCAGCGGPALTQRAAGGAREAGQ 592
G G GRPG GG AG G R GG AG+
Sbjct: 332 GGGG-----GRPGGGGFAGRPGGGGGGRPGGGGGFAGR 364
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 45.1 bits (105), Expect = 8e-04
Identities = 48/151 (31%), Positives = 56/151 (36%), Gaps = 2/151 (1%)
Frame = -3
Query: 573 PPAAR*VSAGPPQPAHPPYPGRPHCRRT*PWPVR*RCDPRRRGQWPPSPGPG*GAPRARP 394
PPAA +A PP+PA PP P P R P P ++ PP+ P AP P
Sbjct: 79 PPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPP 138
Query: 393 SRRY*GRRGRTAATWSCKWRGACCA*APPASGP--ARPTPSPGRPHSWSPAQSSSRHRGE 220
R A T A APP P ARPTP+P P PA ++R
Sbjct: 139 PA---PPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPP---PPAGPAARPTPA 192
Query: 219 PLHTAQDGRGAGEVDLAWRSEPRLAAPGPPT 127
P T A P AA PT
Sbjct: 193 PTATPTPVAPPPAAPTARPGSPAPAATPAPT 223
Score = 37.0 bits (84), Expect = 0.21
Identities = 48/171 (28%), Positives = 59/171 (34%), Gaps = 18/171 (10%)
Frame = -3
Query: 588 PASRA---PPAAR*VSAGPPQPAHPPYPGRPHCRRT*PWPVR*RCDPRRRGQWPPSPGPG 418
PA R PP R PP PP PG T P P P R +P PG
Sbjct: 248 PAGRPGAPPPGVR--PGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPG 305
Query: 417 *GAP----RARPSRRY*GRRGRTAATWSCKWRGACCA*APPASGPARPTPS--------P 274
P P GR A + +G PPA PA TP+ P
Sbjct: 306 AATPAPTATPAPGGALTPPPGRPGAGPTPGPQGG----TPPAGAPAAGTPAAPPQAGGLP 361
Query: 273 GRPHSWSPAQSSSRHRGEPLHTAQDGR---GAGEVDLAWRSEPRLAAPGPP 130
RP + + A + S G T R V A+++ P + AP PP
Sbjct: 362 ARPAAPAGAAAPSTVPGSAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPP 412
Score = 35.8 bits (81), Expect = 0.47
Identities = 35/124 (28%), Positives = 44/124 (35%)
Frame = -3
Query: 588 PASRAPPAAR*VSAGPPQPAHPPYPGRPHCRRT*PWPVR*RCDPRRRGQWPPSPGPG*GA 409
P APPAA A PP A PP+P P P P R PP P P
Sbjct: 55 PPGAAPPAAPARPAAPPPAAAPPHPPAA------PPPA---AAPPRPAAPPPPPPPPAAR 105
Query: 408 PRARPSRRY*GRRGRTAATWSCKWRGACCA*APPASGPARPTPSPGRPHSWSPAQSSSRH 229
P P + + + + PPA ARP P+P P P ++ +H
Sbjct: 106 PAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAP----PPAAAPQH 161
Query: 228 RGEP 217
P
Sbjct: 162 APPP 165
