>KCC002998A_C01 KCC002998A_c01
cTTACAATTAAACTAGCAAGGCAGCAGTATTGCGTGTTGCAAACCTGCGGAAGAACAAGT
TAGCAGACAGTTCGCTTGGTATTTCTTTAATCTTTTTCATCAATACATCTCGCTTCGTTC
CTTTGTTCACGTATAGCATGAAGACTATCGCCCACAAGTCGCTTGCGCCTGCTAGCCATG
GCCATGTCGTTCAAGCTCGCTCTGTAATCTGCCGCGGCGGTGGCTTCGGGAAAAGTAACA
AGAAGGCGGAGACAGGCGGCAGCGGCATTTACACGGCGCCCAAGTCTAAGAAGCGTGTGG
ATCTGGTGAAGGAGCTAGGACTAGACAACAGCGCAGCTGCTGCGGCGGCCCCGGTGGTGG
CGGCGCCCGCCTCAGAGACGGAGCTGCTGTCCAAGGGCAACTGGTTCCCATTGGCCAAGC
TGTCGGACTTTGCAGGCGAGAAGAAGCGCAAGATCTGCGAGCTCAAGGGCAACAAGCAGG
TCGTTGTGCTTCATCAGTACCAGGACACCATCTACGCCACT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002998A_C01 KCC002998A_c01
         (521 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]            46  3e-04
gb|AAM93448.1| hypothetical protein [Oryza sativa (japonica cult...    44  0.001
gb|AAP04194.1| hypothetical protein [Oryza sativa (japonica cult...    41  0.011
emb|CAE05632.1| OSJNBb0061C13.14 [Oryza sativa (japonica cultiva...    39  0.031
gb|AAL25171.1|AC079852_4 Putative TNP-like transposable element ...    39  0.031

>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
          Length = 274

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
 Frame = -3

Query: 507 CPGTDEAQRPACCP*ARRSCASSRLQSPTAWPMGT------SCPWTAAPSLR-RAPPPPG 349
           CPGT    RP+ C     S A+S   +P   P GT      S PWTA+P    R P P G
Sbjct: 50  CPGTSRGSRPSPC----SSTATSSTSAPGRRPRGTTTSTAWSSPWTASPCASCREPTPRG 105

Query: 348 PPQQLRCCLVLAPSPDPHAS*TWAPCKCRCRLSPPS 241
            P   R C    PSP P        C  R     PS
Sbjct: 106 RPAPCRRC----PSPAPARP---TACSSRSTAGSPS 134

>gb|AAM93448.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|31430675|gb|AAP52556.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 886

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = -3

Query: 447 ASSRLQSPTAWPMGTSCPWTAAPSLRRAPPPPGPPQQLRCCLVLAPSPDPHAS*TWAPCK 268
           A+SR  SP A P   S P   APS   APP P PPQ        AP+P P  +   AP K
Sbjct: 450 AASRAPSPPAPP---SPPQDPAPSPPHAPPAPSPPQAPAPTPPQAPAPTPPQAPLPAPSK 506

Query: 267 CRCRLSPPSCYFSRSHRRGRLQS 199
            R   +PP  + +R+ ++ ++ +
Sbjct: 507 SRATPAPPPAH-TRATKKAKVDA 528

>gb|AAP04194.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 541

 Score = 40.8 bits (94), Expect = 0.011
 Identities = 33/93 (35%), Positives = 44/93 (46%), Gaps = 7/93 (7%)
 Frame = -3

Query: 447 ASSRLQSPTAWPMGTSCPWTAAPSLRRAP-------PPPGPPQQLRCCLVLAPSPDPHAS 289
           A+SR  SP A P   S P  AAPS   AP       P P PPQ        +P+P P  +
Sbjct: 304 AASRAPSPPAPP---SPPQDAAPSPPHAPAPSPPQAPAPTPPQAPAPTPPRSPTPTPPQA 360

Query: 288 *TWAPCKCRCRLSPPSCYFSRSHRRGRLQSELE 190
              AP K R   +PP     R+HRR   +++++
Sbjct: 361 PLPAPSKSRAPQAPP-----RTHRRATKKAKID 388

>emb|CAE05632.1| OSJNBb0061C13.14 [Oryza sativa (japonica cultivar-group)]
           gi|32492243|emb|CAE03740.1| OSJNBa0019D11.2 [Oryza
           sativa (japonica cultivar-group)]
          Length = 983

 Score = 39.3 bits (90), Expect = 0.031
 Identities = 31/89 (34%), Positives = 43/89 (47%), Gaps = 6/89 (6%)
 Frame = -3

Query: 447 ASSRLQSPTAWPMGTSCPWTAAPSLRRAPPPPGPPQ------QLRCCLVLAPSPDPHAS* 286
           A+SR  SP A P   S P   APS   APP P PPQ      Q       AP+P P  + 
Sbjct: 479 AASRAPSPPAPP---SPPQDPAPSPPHAPPAPSPPQAPASTPQDPAPTPRAPTPTPPQAP 535

Query: 285 TWAPCKCRCRLSPPSCYFSRSHRRGRLQS 199
             AP K R   +PP  + +R+ ++ ++ +
Sbjct: 536 LPAPSKSRAPPAPPLAH-TRATKKAKVDA 563

>gb|AAL25171.1|AC079852_4 Putative TNP-like transposable element [Oryza sativa]
            gi|19919979|gb|AAM08427.1|AC112513_13 Putative TNP-like
            transposable element [Oryza sativa]
            gi|31430117|gb|AAP52075.1| putative TNP-like transposable
            element [Oryza sativa (japonica cultivar-group)]
          Length = 2535

 Score = 39.3 bits (90), Expect = 0.031
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
 Frame = -3

Query: 447  ASSRLQSPTAWPMGTSCPWTAAPSLRRAPPPPGPPQQLRCCLVL--------APSPDPHA 292
            A+SR  SP A P   S P   APS   APP P PPQ       L        AP+P P  
Sbjct: 1658 AASRAPSPPAPP---SPPQDPAPSPPHAPPAPSPPQAPASTPPLDPAPTPPRAPTPTPPQ 1714

Query: 291  S*TWAPCKCRCRLSPPSCYFSRSHRRGRLQS 199
            +   AP K R   +PP  + +R+ ++ ++ +
Sbjct: 1715 APLPAPSKSRAPPAPPPAH-TRATKKAKVDA 1744

EST assemble image

clone accession position 1 LCL056d02_r AV629311 1 521 2 MX209g02_r BP089558 2 352

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