Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002996A_C01 KCC002996A_c01
(531 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC92389.1| hypothetical protein [Oryza sativa (japonica cul... 41 0.011
ref|XP_327762.1| hypothetical protein [Neurospora crassa] gi|289... 37 0.16
ref|NP_065708.1| zinc finger protein 304 [Homo sapiens] gi|23397... 37 0.21
ref|NP_175569.1| KH domain protein [Arabidopsis thaliana] gi|254... 37 0.21
dbj|BAA96767.1| unnamed protein product [Oryza sativa (japonica ... 36 0.27
>dbj|BAC92389.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|35215204|dbj|BAC92556.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 312
Score = 40.8 bits (94), Expect = 0.011
Identities = 37/139 (26%), Positives = 60/139 (42%), Gaps = 12/139 (8%)
Frame = -3
Query: 499 IHHMSVLKCQH*TSVASLAH-------SIACPRHSTEHSEPAAP--VQCTSLKWP---YP 356
IH +S+L ++ +A +H + C R S + P AP C +L P +P
Sbjct: 14 IHSISLLHRRNHLPIARPSHYRHTPPSAGRCRRVSRRRTSPLAPSATPCQALPRPPLRFP 73
Query: 355 QPPPMPLKAEHPPFHRGYHTTINPAALRQTRGPGHVRPQVRHSQVKRLCLRDGSCIVAHA 176
PPP PPFHR T+ +A G P ++ +Q + LR + I+ +
Sbjct: 74 IPPPQ------PPFHRASRATVAISA------SGRAAPPLQSAQCCAVALRGTAAIIRGS 121
Query: 175 ATDQCISGTMSTSELLAPC 119
A C + + L++PC
Sbjct: 122 AIPPC---SPVVAGLISPC 137
>ref|XP_327762.1| hypothetical protein [Neurospora crassa] gi|28925500|gb|EAA34534.1|
hypothetical protein [Neurospora crassa]
Length = 920
Score = 37.0 bits (84), Expect = 0.16
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 451 SLAHSIACPRHSTEHSEPAAPVQCTSLKWPYPQPPPMPLKAEHPP 317
S S+A R ST +S+PA P +S + P PP P + EH P
Sbjct: 18 SQTSSLASSRPSTPNSQPAFPRLSSSSSYSQPSEPPQPSQPEHQP 62
>ref|NP_065708.1| zinc finger protein 304 [Homo sapiens]
gi|23397005|sp|Q9HCX3|Z304_HUMAN Zinc finger protein 304
gi|9968290|emb|CAC06610.1| zinc finger protein 304 [Homo
sapiens]
Length = 659
Score = 36.6 bits (83), Expect = 0.21
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 370 SEMYIAQVQPARCAPCCDVGMQWNGLMMLRKFSAGTSGQTCGEC 501
S+M A+V+P RC PC +V + + L+ RK +G C EC
Sbjct: 241 SQMTHAEVRPFRCLPCGNVFKEKSALINHRKIHSGEISHVCKEC 284
>ref|NP_175569.1| KH domain protein [Arabidopsis thaliana] gi|25405483|pir||D96554
hypothetical protein F19C24.19 [imported] - Arabidopsis
thaliana gi|12321677|gb|AAG50879.1|AC025294_17
hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical
protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis
thaliana]
Length = 621
Score = 36.6 bits (83), Expect = 0.21
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 364 PYPQPPPMPLKAEHPPFHRGYHTTINPAALRQTRGPGHVRP 242
PYP+PPP ++P YH+ + P R GPG RP
Sbjct: 456 PYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRP 496
>dbj|BAA96767.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9757687|dbj|BAB08206.1| ESTs
C26093(C11622),AU090634(C12429) correspond to a region
of the predicted gene.~Similar to Arabidopsis thaliana
chromosome II BAC T3K9; hypothetical protein (AC004261)
[Oryza sativa (japonica cultivar-group)]
Length = 258
Score = 36.2 bits (82), Expect = 0.27
Identities = 20/47 (42%), Positives = 27/47 (56%)
Frame = -2
Query: 398 GCTCAMYISEMALPTAAANAPQSRAPAVPPRISHDHQSCRATTDARA 258
GC ++Y + LP A +AP PAVPP +S S R+ T+ARA
Sbjct: 23 GCNPSVYRGPILLPRQANSAP----PAVPPEMSSSSGSGRSATEARA 65
