KCC002994A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002994A_C01 KCC002994A_c01
ctgcagcaggaggtggcgggcacgcgcgcagcagcgggctgtgccagcgccgttcagctg
ctgggctatacggagccgcaGACGGATGACGATCCGCATGAGCTGCTGCTTTCCTACGTG
CCGGGAATGACCCTGTCTGCCTACCTGGACCTGGTGCACCGCGCGGACGTGGTCAAGCGC
TTCGTCGCCAAGAAAGGCAAGAAGGGCAAGAAGGGCAAGACTCTGATCCCCCGTACCAGT
ACCATTCTGTCAACTCCACTCCTCAAGCAGCTGGCCATCTCGGTGCTCACGGCGGTCAAC
GTCATGCACAACAACAACATGTGTCACGGTGATATCAAAAGTGACAACGTATACGTCAAC
ACGGGCGACGCAGATGGCGTCATCCACTTTGTCCTTGGGGATTTCGGGAGTGCGGAGCCT
ACCGACAGCGAGGGCATGCTGATAAGTGGTGCGGTTGGGGGCTCCCGGGCGACAGCGGCA
CCCGAGCAGCGCGTGCACCTGGCCGGGGGCACGCCGGCGTGTGGACTGAGCCGCATGATT
GACATGGCGTCGGTGGGGCTGCTGCTGGCGGAGGCAGCTCAGTTCCGCCCAATGCCAACA
CGGCTGTGGGCGTACTCGCTGTTTGAGGACGACCTGGACGAGTGGGTGCCCGAGGGCTGn
cgcgacctgtgcgcgcagctgc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002994A_C01 KCC002994A_c01
         (682 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL14118.1| Ca/CaM-dependent kinase-1 [Neurospora crassa]           54  2e-06
ref|XP_331515.1| hypothetical protein [Neurospora crassa] gi|289...    54  2e-06
dbj|BAA21906.1| serine/threonine protein kinase [Streptomyces gr...    52  1e-05
ref|NP_869262.1| probable serine/threonine-protein kinase pknH [...    50  3e-05
pir||S45285 probable serine/threonine-specific protein kinase (E...    48  1e-04

>gb|AAL14118.1| Ca/CaM-dependent kinase-1 [Neurospora crassa]
          Length = 415

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +1

Query: 283 VLTAVNVMHNNNMCHGDIKSDNVYVNTGDADGVIHFVLGDFGSAEPTDSEGMLISGAVGG 462
           VL AVN +H NN+ H D+K +N+   T DAD     VL DFG A+  D++  +++  + G
Sbjct: 126 VLGAVNYLHENNVVHRDLKPENLLYLTRDADS--DLVLADFGIAKMLDNKDEVLT-TMAG 182

Query: 463 SRATAAPEQRVHLAGGTPACGLSRMIDMASVGLL 564
           S   AAPE  +    G P       +DM S+G++
Sbjct: 183 SFGYAAPEVMLKQGHGKP-------VDMWSMGVI 209

>ref|XP_331515.1| hypothetical protein [Neurospora crassa] gi|28920286|gb|EAA29659.1|
           hypothetical protein [Neurospora crassa]
          Length = 574

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +1

Query: 283 VLTAVNVMHNNNMCHGDIKSDNVYVNTGDADGVIHFVLGDFGSAEPTDSEGMLISGAVGG 462
           VL AVN +H NN+ H D+K +N+   T DAD     VL DFG A+  D++  +++  + G
Sbjct: 287 VLGAVNYLHENNVVHRDLKPENLLYLTRDADS--DLVLADFGIAKMLDNKDEVLT-TMAG 343

Query: 463 SRATAAPEQRVHLAGGTPACGLSRMIDMASVGLL 564
           S   AAPE  +    G P       +DM S+G++
Sbjct: 344 SFGYAAPEVMLKQGHGKP-------VDMWSMGVI 370

>dbj|BAA21906.1| serine/threonine protein kinase [Streptomyces griseus]
          Length = 555

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 47/158 (29%), Positives = 73/158 (45%)
 Frame = +1

Query: 118 VPGMTLSAYLDLVHRADVVKRFVAKKGKKGKKGKTLIPRTSTILSTPLLKQLAISVLTAV 297
           V G  L+  +DL+   D+  R++ + G        L P  +++L+  +   LA S     
Sbjct: 87  VEGDLLALVMDLIDGPDL-HRYLRENGP-------LTPVAASLLTAQIADALAAS----- 133

Query: 298 NVMHNNNMCHGDIKSDNVYVNTGDADGVIHFVLGDFGSAEPTDSEGMLISGAVGGSRATA 477
              H + + H D+K  NV V+  + DG +H +L DFG A   DS G+  +    G+ A  
Sbjct: 134 ---HADGVVHRDLKPANVLVD--ERDGQMHPMLTDFGIARLADSPGLTRTHEFVGTPAYV 188

Query: 478 APEQRVHLAGGTPACGLSRMIDMASVGLLLAEAAQFRP 591
           APE     A G P    +  +D+   G+LL E    RP
Sbjct: 189 APES----AEGRPQ---TSAVDIYGAGILLYELVTGRP 219

>ref|NP_869262.1| probable serine/threonine-protein kinase pknH [Pirellula sp.]
           gi|32446813|emb|CAD78719.1| probable
           serine/threonine-protein kinase pknH [Pirellula sp.]
          Length = 364

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 42/139 (30%), Positives = 64/139 (45%)
 Frame = +1

Query: 235 TSTILSTPLLKQLAISVLTAVNVMHNNNMCHGDIKSDNVYVNTGDADGVIHFVLGDFGSA 414
           T+  L+ P++  +A  V +A+   HN+ + H D+K  N+++ T DA    H  LGDFG A
Sbjct: 112 TNGALAWPVVVDVARQVCSALQCAHNHGVIHRDLKPGNLFL-TRDA----HVKLGDFGIA 166

Query: 415 EPTDSEGMLISGAVGGSRATAAPEQRVHLAGGTPACGLSRMIDMASVGLLLAEAAQFRPM 594
               S  +   G   G+ A  APEQ   + G      +S   D+ ++G +L E    R +
Sbjct: 167 RDQHSSDLTSQGLTVGTHAYMAPEQ---ITGDE---AISGKADLYALGCVLFEMLANRKV 220

Query: 595 PTRLWAYSLFEDDLDEWVP 651
                   LFE  L    P
Sbjct: 221 FAGENFAQLFEQHLRTKAP 239

>pir||S45285 probable serine/threonine-specific protein kinase (EC 2.7.1.-) -
           Entamoeba histolytica gi|158975|gb|AAA19876.1| protein
           serine/threonine kinase
          Length = 290

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 26/85 (30%), Positives = 43/85 (50%)
 Frame = +1

Query: 175 KRFVAKKGKKGKKGKTLIPRTSTILSTPLLKQLAISVLTAVNVMHNNNMCHGDIKSDNVY 354
           K  V +  K G   K +  + S  LS  +  ++ + +   +  +HNN + H DIK DN+ 
Sbjct: 92  KCMVTEYAKYGSVQKMIESKPSNSLSKSIKIKMLLDIARGIEYLHNNGILHRDIKPDNML 151

Query: 355 VNTGDADGVIHFVLGDFGSAEPTDS 429
           + + D D  ++  L DFGSA   +S
Sbjct: 152 ITSLDNDIPVNAKLTDFGSARNINS 176



EST assemble image


clone accession position
1 MX221f06_r BP090292 1 434
2 LC075a02_r AV624243 230 682




Chlamydomonas reinhardtii
Kazusa DNA Research Institute