KCC002991A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002991A_C01 KCC002991A_c01
CACGGTTGAGTTGTTACACAGCGACTCAGGATCAACGCGGGGAGGCAAGCACCTCGTCGC
CACCTGTCCTGAAGCGTGGTTCCGGTGATGTGCATGCGGTACCTCACATTCGACAAATAA
TCAGTTGCCCTCATCCATGACATGGCTCGGCGTCCTCGGGTGCTGGGACTGTCCCCTCTG
TAACATCCGCATTCATGACATGTAGTCTTCACTCTGCTGCAAAATGGGCAAAAACACCTG
TGTCTTGCACAAAAGTATACTTCGTCTCTACGGCCAGGCCGCCACTCATCGGCCTACTTA
TCACGCACTTCGTCGACATCCCTCTAACGCAAATGAACGATCTGCGCCATCTAAAATAAA
AGGATACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002991A_C01 KCC002991A_c01
         (368 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB15704.1| unnamed protein product [Homo sapiens]                 33  0.76
gb|AAH48793.1| Similar to hypothetical protein LOC216438 [Homo s...    33  1.00
ref|XP_136697.1| similar to KIAA1399 protein [Homo sapiens] [Mus...    33  1.00
dbj|BAA92637.1| KIAA1399 protein [Homo sapiens]                        33  1.00
dbj|BAC65784.1| mKIAA1399 protein [Mus musculus]                       33  1.00

>dbj|BAB15704.1| unnamed protein product [Homo sapiens]
          Length = 220

 Score = 33.5 bits (75), Expect = 0.76
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -3

Query: 246 KTQVFLPILQQSEDYMS*MRMLQRGQSQHPRTPSHVMDEGN*LFVECEVPHAHHRNHASG 67
           K+   LP    S ++      L+ GQS+  RT           F+ C VPHAHH + A+G
Sbjct: 5   KSYYALPSPAFSRNHTGLRSELRSGQSELSRTGP--------AFLHCHVPHAHHSSPAAG 56

Query: 66  Q 64
           Q
Sbjct: 57  Q 57

>gb|AAH48793.1| Similar to hypothetical protein LOC216438 [Homo sapiens]
          Length = 357

 Score = 33.1 bits (74), Expect = 1.00
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 89  CACGTSHSTNNQLPSSMTWLGVLGCWDCPLCNIRIH 196
           C C  S    +Q P  + W+   GCW C LC  + H
Sbjct: 126 CRCDGSVKCTHQ-PCLIKWISERGCWSCELCYYKYH 160

>ref|XP_136697.1| similar to KIAA1399 protein [Homo sapiens] [Mus musculus]
          Length = 405

 Score = 33.1 bits (74), Expect = 1.00
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 89  CACGTSHSTNNQLPSSMTWLGVLGCWDCPLCNIRIH 196
           C C  S    +Q P  + W+   GCW C LC  + H
Sbjct: 15  CRCDGSVKCTHQ-PCLIKWISERGCWSCELCYYKYH 49

>dbj|BAA92637.1| KIAA1399 protein [Homo sapiens]
          Length = 452

 Score = 33.1 bits (74), Expect = 1.00
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 89  CACGTSHSTNNQLPSSMTWLGVLGCWDCPLCNIRIH 196
           C C  S    +Q P  + W+   GCW C LC  + H
Sbjct: 221 CRCDGSVKCTHQ-PCLIKWISERGCWSCELCYYKYH 255

>dbj|BAC65784.1| mKIAA1399 protein [Mus musculus]
          Length = 471

 Score = 33.1 bits (74), Expect = 1.00
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 89  CACGTSHSTNNQLPSSMTWLGVLGCWDCPLCNIRIH 196
           C C  S    +Q P  + W+   GCW C LC  + H
Sbjct: 241 CRCDGSVKCTHQ-PCLIKWISERGCWSCELCYYKYH 275



EST assemble image


clone accession position
1 LC071b03_r AV623965 1 255
2 MXL023e01_r BP094464 37 407




Chlamydomonas reinhardtii
Kazusa DNA Research Institute