KCC002987A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002987A_C01 KCC002987A_c01
ctgaatgtgctggactggtgtggttgacacgcccggccggatcatcgtcatgaccacgaa
tcaccccgagaagctggaccCCGCACTCATCCGACCCGGTCGCATCAACAAGAAGGTGTA
CATGGGCCGCCTGCGTGTGTGCGAGGCGTTGTCCATGGTGCGCCACTACTTCGGCCCGGT
GTCCGCCGCTGACGAGGCCGCGCTGCGGGCGGTGTTTGAGGACGACGCACTGTCGCCGGC
CGACCTGGAGGCCATGTGTGCGGAGCACGACACCCCCGCGGAGCTGGTGGAGGCTGTGGA
GCGGCGGTTGCGCGAGGGCACCGAGGAGTTTAAGCCATGCTGAGGAGGGGGCTGATGGAG
GGTGCAAAAGGAGGGGGCGAAAGGACGGGGCTCGCTGGTAGGGAGCTACTGGTGGGCGGA
AGAGGCGGCGGCGGGAGTGCCTCCCCTATGTCTGCGCATGCTCGAACGGGCGGTTAGTTT
CTTGCTTTGAGAAGAACAATCTTAACATCTCTTGCATGCACATCTACGTAGTGCGTAGGT
TCAGTGAGACATTACAACTGTGAGCTTTTCAACCGTAGTGCAGCACAGACCAGGTTTCTC
TCCGCCTGCCAATCCGCTTGCAACCAGGCGCAAACCAATTGCCTTTTGTTGCGTGTGTTT
GTGTGAGTCTGTGTGCTCCAGACAGCATCGCGGCTTTTTTTATCAGCGGTGCTGTCGCCC
TTGCATGTCAACGACGTCCACATGTTGGGCTGGGTGACTGGCTTGGGTGTCCGTGTTGGT
GGCGAATGGAACGATGTGCGTGGAGGTGATCAGGTGGTATACAGAGGTTGGGATTTCGAA
GATACCGTAGTTGAAGCATGGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002987A_C01 KCC002987A_c01
         (862 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    65  1e-09
dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]                        65  1e-09
ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref...    65  1e-09
ref|NP_593875.1| similar to yeast Bcs1p mitochondrial protein re...    65  2e-09
ref|NP_176303.1| proline-rich protein family [Arabidopsis thalia...    63  5e-09

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 40/107 (37%), Positives = 49/107 (45%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PPPP PP S S P SP  SPPP  P   P       P  P  +  P+PPP+P     P +
Sbjct: 141 PPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSP-----PPS 195

Query: 254 WPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
            PP  P +   P+ PP+  P   R P  S  +P   PR     P +P
Sbjct: 196 PPPSPPPS-PPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSP 241

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 39/108 (36%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PPP  PP   S P SP  SPPP  P   P       P  P  +  P PPP+P     P  
Sbjct: 152 PPPSPPP---SPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPPRP 208

Query: 254 WPPGRPATVRRPQ-TPPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
            P   P + R P  +PP+ RP  RR P      P   P   A  P  P
Sbjct: 209 PPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAPPPPRP 256

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 34/107 (31%), Positives = 42/107 (38%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PPP +PP + S P  P   PPP  P   P L  + +P  P     P PPP P     P +
Sbjct: 51  PPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPS 110

Query: 254 WPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
            PP  P     P +PP   P     P      P   P + +  P  P
Sbjct: 111 PPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPP 157

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 36/117 (30%), Positives = 42/117 (35%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQ 294
           PP  +  +     PPPP PP    LP SP   PPP  P + P       P  P +   P 
Sbjct: 57  PPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPP-PPPVPPPPPPPPPPPPPPSPPPPP 115

Query: 293 PPPAPRGCRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTPRTHAGGP 123
           PPP P     P   PP  P     P  PP   P     P      P + P +    P
Sbjct: 116 PPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSP 172

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 42/125 (33%), Positives = 49/125 (38%), Gaps = 15/125 (12%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQ 294
           PP+         LPPPP PP  S  P SP L P P  P  SP  +    P  P       
Sbjct: 263 PPLPPPPSPPPPLPPPPSPPPPSPPPPSP-LPPSPRPPKPSPPNNPFPRPPPPNPPPPRP 321

Query: 293 PPPAPRGCR-APHTWPPGRP--------------ATVRRPQTPPAARPRQRRTPGRSSGA 159
           PPP+P   R  P + PP RP               +  +P  PP+  PR  R P R    
Sbjct: 322 PPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRR 381

Query: 158 PWTTP 144
           P T P
Sbjct: 382 PPTAP 386

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 38/115 (33%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PPPP PP S   P  P   PPP  P   P       P  P  +  P PPP+P    +P  
Sbjct: 116 PPPPPPPPSPPPPPPPPPPPPPNPPPPPP-------PPPPSPSPPPSPPPSPP--PSPPP 166

Query: 254 WPPGRPATVRRPQTPPAARPRQRRTPGRS-------SGAPWTTPRTHAGGPCTPS 111
            PP  P     P  PP+  PR   +P  S       S  P   P  +   P  PS
Sbjct: 167 SPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPS 221

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 35/107 (32%), Positives = 40/107 (36%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PPPP PP  S  P  P   PPP +P   P       P  P     P PPP P    +P  
Sbjct: 101 PPPPPPPPPSPPPPPPPPPPPPPSPPPPP------PPPPPPPPNPPPPPPPPPPSPSPPP 154

Query: 254 WPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
            PP  P     P  PP+  P    +P      P   PR     P +P
Sbjct: 155 SPPPSPPPSPPPSPPPSPPPSPPPSP-----PPSPPPRPPPSPPPSP 196

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 31/82 (37%), Positives = 32/82 (38%), Gaps = 2/82 (2%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPV--LSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAP 261
           PPPP PP     P SP   L PPP  P   P       P  P   + P P P P   R P
Sbjct: 246 PPPPAPPPPRPPPPSPPPPLPPPPSPPPPLP------PPPSPPPPSPPPPSPLPPSPRPP 299

Query: 260 HTWPPGRPATVRRPQTPPAARP 195
              PP  P     P  PP  RP
Sbjct: 300 KPSPPNNPFPRPPPPNPPPPRP 321

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 32/87 (36%), Positives = 36/87 (40%), Gaps = 2/87 (2%)
 Frame = -3

Query: 431 PPPLPPTSS--SLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPH 258
           PPP PP S   S P  P  SPPP  P   P       P  P   +   P P+P   R P 
Sbjct: 172 PPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPP 231

Query: 257 TWPPGRPATVRRPQTPPAARPRQRRTP 177
             PP  P +   P+ PP A P  R  P
Sbjct: 232 RRPPFPPPSPPPPRPPPPAPPPPRPPP 258

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 36/98 (36%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -3

Query: 434 PPPPLP-PTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPH 258
           PPPPLP P S   P  P  SPPP  PS  P   +  +PR P+ +    P P P     P+
Sbjct: 261 PPPPLPPPPSPPPPLPPPPSPPP--PSPPPPSPLPPSPRPPKPSPPNNPFPRP---PPPN 315

Query: 257 TWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTP 144
             PP  P     P  PP   P   R P  S   P   P
Sbjct: 316 PPPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPP 353

 Score = 49.3 bits (116), Expect = 8e-05
 Identities = 37/107 (34%), Positives = 40/107 (36%), Gaps = 16/107 (14%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASP------------VLSPPPFAPSISPLLSMA*TPRCPRATAAPQ- 294
           PPPP PP  S LP SP               PPP  P   P       PR P  +  P  
Sbjct: 281 PPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPR 340

Query: 293 -PPPAPRGCRAP--HTWPPGRPATVRRPQTPPAARPRQRRTPGRSSG 162
            PPP+P   R P     PP  P     P  PP   PR  R P  + G
Sbjct: 341 PPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRPPTAPG 387

 Score = 43.5 bits (101), Expect = 0.004
 Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
 Frame = -3

Query: 431 PPPLPPTSS--SLPASPVLSPPPFAP-SISPLLSMA*TPRCPRATAAPQPPPAPRGCRAP 261
           PPP PP S   S P SP  SPPP  P S +P      +P  P     P+ PP P     P
Sbjct: 184 PPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPP 243

Query: 260 HTWPPGRPATVRRPQTPPAARP 195
              PP  P   R P  PP+  P
Sbjct: 244 PRPPPPAPPPPRPP--PPSPPP 263

 Score = 43.5 bits (101), Expect = 0.004
 Identities = 27/80 (33%), Positives = 30/80 (36%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHT 255
           PP P PP+ S     P    PPF P   P       P  P   A P P P P     P  
Sbjct: 214 PPSPRPPSPSPPSPRPPPRRPPFPPPSPP-------PPRPPPPAPPPPRPPPPSPPPPLP 266

Query: 254 WPPGRPATVRRPQTPPAARP 195
            PP  P  +  P +PP   P
Sbjct: 267 PPPSPPPPLPPPPSPPPPSP 286

 Score = 43.1 bits (100), Expect = 0.006
 Identities = 31/98 (31%), Positives = 35/98 (35%), Gaps = 1/98 (1%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPP-PAPRGCRAPH 258
           PPP  PP+    P      P P  PS SP        R P    +P PP P P     P 
Sbjct: 196 PPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAPPPPR 255

Query: 257 TWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTP 144
             PP  P  +  P +PP   P     P  S   P   P
Sbjct: 256 PPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLP 293

 Score = 42.7 bits (99), Expect = 0.008
 Identities = 32/81 (39%), Positives = 35/81 (42%), Gaps = 2/81 (2%)
 Frame = -3

Query: 431 PPPLPPTSSSLPASPVLSPPPF--APSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPH 258
           PPP PP S   P SP   PPP    PS  P      +PR P     P PPP+P   R P 
Sbjct: 192 PPPSPPPSP--PPSPPPRPPPSPNPPSPRPPSPSPPSPR-PPPRRPPFPPPSPPPPRPP- 247

Query: 257 TWPPGRPATVRRPQTPPAARP 195
             PP  P     P +PP   P
Sbjct: 248 --PPAPPPPRPPPPSPPPPLP 266

 Score = 39.3 bits (90), Expect = 0.084
 Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQ--PPPAPRGCRAP 261
           PP P PP+    P  P   PPP  P   P       PR P  +  P   PPP+P     P
Sbjct: 219 PPSPSPPSPRPPPRRPPF-PPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPP 277

Query: 260 HTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAP 156
              PP  P+       PP+ RP +   P      P
Sbjct: 278 PPSPP-PPSPPPPSPLPPSPRPPKPSPPNNPFPRP 311

 Score = 33.9 bits (76), Expect = 3.5
 Identities = 26/93 (27%), Positives = 35/93 (36%)
 Frame = -3

Query: 392 SPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHTWPPGRPATVRRPQT 213
           +P   PPP     SP++++  TP  P       PP +P     P   PP  P+    P  
Sbjct: 19  APARKPPPRR---SPVVALVETPAAP-------PPGSPPPGTPPPGVPPPTPSGPEHPPP 68

Query: 212 PPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
           PP   P   + P   S +P   P      P  P
Sbjct: 69  PPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPP 101

>dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]
          Length = 1134

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 57/146 (39%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
 Frame = -3

Query: 437  LPPPPLPPTSSSLPASPVLSP-PPFAPSISPLLSMA*TPRCPRATAAPQPPP----APRG 273
            LPPPPLP     LP  P+  P PP  P + PLL    T   P A    QPPP     PR 
Sbjct: 972  LPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRR 1031

Query: 272  CRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWT--TPRTHAGGPCTPSC*CD 99
             R+P   PP RPA  R P+  P AR R R +P R   +P +  +PR   G    P     
Sbjct: 1032 RRSPPR-PPSRPAR-RGPRPTPQARRRPRPSPRRLLRSPHSLCSPRLRPGPRADPR---- 1085

Query: 98   RVG*VRGPASRGDSWS*R*SGRACQP 21
            R      P  R  SW    SG AC+P
Sbjct: 1086 RERASTSPPPR--SWP---SGSACRP 1106

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 44/107 (41%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
 Frame = -3

Query: 473  PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPL-LSMA*TPRCPRATAAP 297
            PP RA A   EA  PPP PP     P  P L PPP  P   PL L     P  PR    P
Sbjct: 941  PPPRAPALPSEARAPPPPPPP----PPHPPLPPPPLPPPPLPLRLPPLPPPPLPR-PHPP 995

Query: 296  QPPPAPRGCRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAP 156
             PPP P     P T       T+R+P  P  A PR+RR+P R    P
Sbjct: 996  PPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRP 1042

>ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref|XP_353550.1| KIAA1856
            protein [Homo sapiens]
          Length = 2182

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 57/146 (39%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
 Frame = -3

Query: 437  LPPPPLPPTSSSLPASPVLSP-PPFAPSISPLLSMA*TPRCPRATAAPQPPP----APRG 273
            LPPPPLP     LP  P+  P PP  P + PLL    T   P A    QPPP     PR 
Sbjct: 2020 LPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRR 2079

Query: 272  CRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWT--TPRTHAGGPCTPSC*CD 99
             R+P   PP RPA  R P+  P AR R R +P R   +P +  +PR   G    P     
Sbjct: 2080 RRSPPR-PPSRPAR-RGPRPTPQARRRPRPSPRRLLRSPHSLCSPRLRPGPRADPR---- 2133

Query: 98   RVG*VRGPASRGDSWS*R*SGRACQP 21
            R      P  R  SW    SG AC+P
Sbjct: 2134 RERASTSPPPR--SWP---SGSACRP 2154

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 44/107 (41%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
 Frame = -3

Query: 473  PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPL-LSMA*TPRCPRATAAP 297
            PP RA A   EA  PPP PP     P  P L PPP  P   PL L     P  PR    P
Sbjct: 1989 PPPRAPALPSEARAPPPPPPP----PPHPPLPPPPLPPPPLPLRLPPLPPPPLPR-PHPP 2043

Query: 296  QPPPAPRGCRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAP 156
             PPP P     P T       T+R+P  P  A PR+RR+P R    P
Sbjct: 2044 PPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRP 2090

 Score = 38.1 bits (87), Expect = 0.19
 Identities = 27/80 (33%), Positives = 28/80 (34%)
 Frame = -3

Query: 446  GEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCR 267
            G  LPPP  P   S   A P   PPP  P + P                P  PP P   R
Sbjct: 1985 GAGLPPPRAPALPSEARAPPPPPPPPPHPPLPP----------------PPLPPPPLPLR 2028

Query: 266  APHTWPPGRPATVRRPQTPP 207
             P   PP  P    RP  PP
Sbjct: 2029 LPPLPPPPLP----RPHPPP 2044

>ref|NP_593875.1| similar to yeast Bcs1p mitochondrial protein required for
           expression of functional Rieske iron-sulfur protein; AAA
           family ATPase [Schizosaccharomyces pombe]
           gi|7708586|emb|CAB90134.1| SPAC644.07
           [Schizosaccharomyces pombe]
          Length = 449

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 39/96 (40%), Positives = 51/96 (52%), Gaps = 13/96 (13%)
 Frame = +2

Query: 17  GVVDTPGRIIVMTTNHPEKLDPALIRPGRINKKVYMGRLRVCEALSMVRHYFG--PVSAA 190
           GV  +  RII MTTNHPEKLDPAL+RPGR++ K Y+G     +   M   ++G  P  A 
Sbjct: 333 GVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMAD 392

Query: 191 D-----------EAALRAVFEDDALSPADLEAMCAE 265
           D            A+L+ +F  +  SPAD   M  E
Sbjct: 393 DLSDIVCPKNTSMASLQGLFVMNKSSPADAVDMAKE 428

>ref|NP_176303.1| proline-rich protein family [Arabidopsis thaliana]
           gi|25404307|pir||E96636 hypothetical protein T7P1.21
           [imported] - Arabidopsis thaliana
           gi|12323348|gb|AAG51656.1|AC018908_22 hypothetical
           protein; 92104-88279 [Arabidopsis thaliana]
          Length = 907

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 45/137 (32%), Positives = 51/137 (36%), Gaps = 17/137 (12%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA------------- 333
           PP  A   +    PPPP P   + +P      PPP  P+  PL   A             
Sbjct: 461 PPPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTI 520

Query: 332 ----*TPRCPRATAAPQPPPAPRGCRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSS 165
                 P  PRA  AP PPP P G  A    PP  P T   P  PP   P Q R P   S
Sbjct: 521 AAPPPPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPP-PMQNRAP---S 576

Query: 164 GAPWTTPRTHAGGPCTP 114
             P     + +GGP  P
Sbjct: 577 PPPMPMGNSGSGGPPPP 593

 Score = 50.1 bits (118), Expect = 5e-05
 Identities = 42/125 (33%), Positives = 50/125 (39%), Gaps = 5/125 (4%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQ 294
           PP RA      A PPPP PP +++ P  P   PPP   +  P       P  P    AP 
Sbjct: 528 PPPRAAV----APPPPPPPPGTAAAPPPP--PPPPGTQAAPPP-----PPPPPMQNRAPS 576

Query: 293 PPPAPRG-CRAPHTWPPGRPATVRRPQTPPAARPRQRRTPGRSSGAPWTTPR----THAG 129
           PPP P G   +    PP  P  +    TPP   P      G ++G P   PR      A 
Sbjct: 577 PPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPPMAMANG-AAGPPPPPPRMGMANGAA 635

Query: 128 GPCTP 114
           GP  P
Sbjct: 636 GPPPP 640

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 43/116 (37%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = -3

Query: 434 PPPPLPPTSSSLPAS-PVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPA--PRGCRA 264
           PPPP PP S    AS P+ SPPP  P     +SM      P     P PPPA  P    A
Sbjct: 420 PPPPPPPLSFIKTASLPLPSPPPTPPIADIAISM------PPPPPPPPPPPAVMPLKHFA 473

Query: 263 PHTWPPGRPATV------RRPQTPPAARPRQRRTPGRSSGAPWTTPRTHAGGPCTP 114
           P   PP  PA +        P TPPA +P +   P      P   P T A  P  P
Sbjct: 474 PPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPP--LPTTIAAPPPPP 527

 Score = 42.7 bits (99), Expect = 0.008
 Identities = 29/98 (29%), Positives = 35/98 (35%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQ 294
           PP     + G   PPPP PP   +  A+P   PPP A +                 A P 
Sbjct: 577 PPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPPMAMA--------------NGAAGPP 622

Query: 293 PPPAPRGCRAPHTWPPGRPATVRRPQTPPAARPRQRRT 180
           PPP   G       PP  P   R  +   AA   +R T
Sbjct: 623 PPPPRMGMANGAAGPPPPPGAARSLRPKKAATKLKRST 660

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 42/145 (28%), Positives = 52/145 (34%), Gaps = 25/145 (17%)
 Frame = -3

Query: 473 PPVRACADIGEALPPPPLPPTSSSLPASPVLSPPPFA-----PSISPLLSMA*TPRCPRA 309
           PP    + I  A  P P PP +  +    +  PPP       P++ PL   A  P  P  
Sbjct: 422 PPPPPLSFIKTASLPLPSPPPTPPIADIAISMPPPPPPPPPPPAVMPLKHFAPPPPPPLP 481

Query: 308 TA-------APQPPPAP-----RGCRAPHTWPPGRPATVRRPQTPP------AARPRQRR 183
            A       AP PP  P     +G   P   PP  P T+  P  PP       A P    
Sbjct: 482 PAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPP 541

Query: 182 TPGRSSG--APWTTPRTHAGGPCTP 114
            PG ++    P   P T A  P  P
Sbjct: 542 PPGTAAAPPPPPPPPGTQAAPPPPP 566

 Score = 33.9 bits (76), Expect = 3.5
 Identities = 25/72 (34%), Positives = 27/72 (36%)
 Frame = -3

Query: 392 SPVLSPPPFAPSISPLLSMA*TPRCPRATAAPQPPPAPRGCRAPHTWPPGRPATVRRPQT 213
           S  L PPP  P   P LS   T   P     P PPP P       + PP  P     P  
Sbjct: 411 SSQLFPPPPPPPPPPPLSFIKTASLP----LPSPPPTPPIADIAISMPPPPPP----PPP 462

Query: 212 PPAARPRQRRTP 177
           PPA  P +   P
Sbjct: 463 PPAVMPLKHFAP 474



EST assemble image


clone accession position
1 LC069a08_r AV623815 1 491
2 LC081a05_r AV624669 345 862
3 MX201e08_r BP089143 497 861




Chlamydomonas reinhardtii
Kazusa DNA Research Institute