KCC002984A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002984A_C01 KCC002984A_c01
ctttCACGGGAATTAGGGTCGCCTGGCAAGAATGCAGGCTCTCAGCGCAAACCGCAATGC
TGTGCGCCCGGTCGCCAAGAGCACTCGCTCTGTGGTGTCGGTGGCCCGCCCTTTCGGCAC
CAAATGCGTGCGCCCAGCCCTAGGCCGCGTGGCGCTGAAGGCCATGAACCAGCAGGCCAC
CGAGGAGAAGAGCGACACCAACAGCGCTGCTCGCCAGATGCTGGGCATGAAGGGCGCTGC
CTTGGAGACGGACATCTGGAAAATCCGCGTGCAGCTTACCAAGCCTGTGACTTGGATCCC
CCTCATTTGGGGTGTTGCTTGCGGTGCTGCCGCTTCGGGCCACTACCAGTGGAACAACCC
CACCCAAATTGCGCAGCTGCTGACCTGCATGATGATGTCGGGCCCCTTCCTGACTGGCTA
CACCCAGACCATTAACGACTGGTATGACCGCGAGATTGACGCAATCAACGAGCCCTACCG
CCCCATCCCCTCGGGCCGCATCTCGGAGCGCGACGTGATCGTGCAGATCTGGGTGCTGCT
GCTAGGCGGCATCGGCCTGGCCTACACCCTGGACCAGTGGGCCGGCCACACCACGCCCGT
GATGCTGCAGCTGACCATCTTCGGCTCCTTCATCTCCTACATCTACTCGGCGCCGGCGCT
CAAGCTCAAGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002984A_C01 KCC002984A_c01
(671 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190750.1| chlorophyll synthetase, putative [Arabidopsis t... 236 2e-61
emb|CAB85464.1| chlorophyll synthase [Avena sativa] 228 6e-59
ref|NP_894105.1| chlorophyll synthase 33 kD subunit [Prochloroco... 227 1e-58
gb|AAP79186.1| chlorophyll synthetase [Bigelowiella natans] 224 7e-58
ref|ZP_00107657.1| COG0382: 4-hydroxybenzoate polyprenyltransfer... 224 1e-57
>ref|NP_190750.1| chlorophyll synthetase, putative [Arabidopsis thaliana]
gi|2129675|pir||S60222 probable chlorophyll synthetase
G4 [imported] - Arabidopsis thaliana
gi|972938|gb|AAA96740.1| putative chlorophyll synthetase
gi|3068709|gb|AAC14409.1| putative chlorophyll
synthetase [Arabidopsis thaliana]
gi|14596067|gb|AAK68761.1| putative chlorophyll
synthetase [Arabidopsis thaliana]
gi|20148305|gb|AAM10043.1| chlorophyll synthetase
[Arabidopsis thaliana]
Length = 387
Score = 236 bits (603), Expect = 2e-61
Identities = 114/182 (62%), Positives = 137/182 (74%), Gaps = 7/182 (3%)
Frame = +2
Query: 146 RVALKAMNQQATEEKSDT-------NSAARQMLGMKGAALETDIWKIRVQLTKPVTWIPL 304
R ++A + KS T S+ Q+LG+KGA+ ET+ WKIR+QLTKPVTW PL
Sbjct: 53 RFVVRAAETDTDKVKSQTPDKAPAGGSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPL 112
Query: 305 IWGVACGAAASGHYQWNNPTQIAQLLTCMMMSGPFLTGYTQTINDWYDREIDAINEPYRP 484
+WGV CGAAASG++ W P +A+ + CMMMSGP LTGYTQTINDWYDR+IDAINEPYRP
Sbjct: 113 VWGVVCGAAASGNFHWT-PEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRP 171
Query: 485 IPSGRISERDVIVQIWVLLLGGIGLAYTLDQWAGHTTPVMLQLTIFGSFISYIYSAPALK 664
IPSG ISE +VI Q+WVLLLGG+G+A LD WAGHTTP + L + GS +SYIYSAP LK
Sbjct: 172 IPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLK 231
Query: 665 LK 670
LK
Sbjct: 232 LK 233
>emb|CAB85464.1| chlorophyll synthase [Avena sativa]
Length = 378
Score = 228 bits (581), Expect = 6e-59
Identities = 118/221 (53%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
Frame = +2
Query: 23 LARMQALSANRNAVRPVAKSTRS-----VVSVARPFGTKCVRPALGRVALKAMNQQATEE 187
LA A S++ RP + S ++ R F C A + K ++
Sbjct: 7 LAAAAATSSSSATFRPPLRFLSSPPSSLTLNRRRSFPVVCAADADAKETTK--KPTIPDK 64
Query: 188 KSDTNSAARQMLGMKGAALETDIWKIRVQLTKPVTWIPLIWGVACGAAASGHYQWNNPTQ 367
S+ Q+LG+KGA ET+IWKIR+QLTKPVTW PL+WGV CGAAASG++ W
Sbjct: 65 APAAGSSFNQLLGIKGAKQETNIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWT-VED 123
Query: 368 IAQLLTCMMMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGRISERDVIVQIWVLLLG 547
+ + + CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSG ISE +VI QIWVLLLG
Sbjct: 124 VTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLG 183
Query: 548 GIGLAYTLDQWAGHTTPVMLQLTIFGSFISYIYSAPALKLK 670
G+GL LD WAGH P++ L + GS +SYIYSAP LKLK
Sbjct: 184 GLGLGALLDIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLK 224
>ref|NP_894105.1| chlorophyll synthase 33 kD subunit [Prochlorococcus marinus str.
MIT 9313] gi|33640658|emb|CAE20447.1| chlorophyll
synthase 33 kD subunit [Prochlorococcus marinus str. MIT
9313]
Length = 336
Score = 227 bits (578), Expect = 1e-58
Identities = 109/156 (69%), Positives = 127/156 (80%)
Frame = +2
Query: 203 SAARQMLGMKGAALETDIWKIRVQLTKPVTWIPLIWGVACGAAASGHYQWNNPTQIAQLL 382
S ARQ+LG+KGA T+IWK+R+QL KPVTWIPL+WGV CGAAASG YQW P +A
Sbjct: 21 SDARQLLGIKGATGTTNIWKLRLQLMKPVTWIPLLWGVICGAAASGQYQWRVPDVLAAA- 79
Query: 383 TCMMMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGRISERDVIVQIWVLLLGGIGLA 562
CM+MSGP LTGYTQTIND+YDREIDAINEPYRPIPSG I V +QIW+LLLGG+ +A
Sbjct: 80 ACMVMSGPLLTGYTQTINDYYDREIDAINEPYRPIPSGAIPLTQVKLQIWMLLLGGLAVA 139
Query: 563 YTLDQWAGHTTPVMLQLTIFGSFISYIYSAPALKLK 670
Y LD+WA HTTPV+L L + GSF+S+IYSAP LKLK
Sbjct: 140 YGLDRWAEHTTPVVLFLALGGSFVSFIYSAPPLKLK 175
>gb|AAP79186.1| chlorophyll synthetase [Bigelowiella natans]
Length = 498
Score = 224 bits (572), Expect = 7e-58
Identities = 108/169 (63%), Positives = 130/169 (76%), Gaps = 8/169 (4%)
Frame = +2
Query: 188 KSDTNSAARQMLGMKGAALETDIWKIRVQLTKPVTWIPLIWGVACGAAASGHYQ--WNNP 361
+SD +S RQ+LG++G + +IWKIR+QL KPVTW+PLIWGV CGAAASG+Y W+
Sbjct: 173 ESDDDSDVRQLLGVRGGSKTDNIWKIRLQLMKPVTWVPLIWGVICGAAASGNYNAVWSGA 232
Query: 362 T------QIAQLLTCMMMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGRISERDVIV 523
+ + L CM+++GP LTGYTQTINDWYDREIDAINEP RPIPSG I E +VI
Sbjct: 233 PLEVCLEDLGKSLGCMVLAGPLLTGYTQTINDWYDREIDAINEPDRPIPSGAIKENEVIA 292
Query: 524 QIWVLLLGGIGLAYTLDQWAGHTTPVMLQLTIFGSFISYIYSAPALKLK 670
QIW LLLGG+GLAY LDQWAGH P++ L+I GSF+SYIYSAP LKLK
Sbjct: 293 QIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLK 341
>ref|ZP_00107657.1| COG0382: 4-hydroxybenzoate polyprenyltransferase and related
prenyltransferases [Nostoc punctiforme]
Length = 348
Score = 224 bits (570), Expect = 1e-57
Identities = 107/169 (63%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Frame = +2
Query: 167 NQQATEEKSDTNSAARQMLGMKGAAL-ETDIWKIRVQLTKPVTWIPLIWGVACGAAASGH 343
N+QA +D N+ RQ+LGMKGAA ET IWKIR+QL KP+TWIPLIWGV CGAA+SG+
Sbjct: 25 NEQAIAS-ADRNAKTRQLLGMKGAAAGETSIWKIRLQLMKPITWIPLIWGVVCGAASSGN 83
Query: 344 YQWNNPTQIAQLLTCMMMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGRISERDVIV 523
Y W + ++LTCM+++GP +TGYTQ +ND+YDREIDAINEPYRPIPSG I VI+
Sbjct: 84 YTWTLEN-VLKVLTCMLLAGPLMTGYTQILNDYYDREIDAINEPYRPIPSGAIPLPQVII 142
Query: 524 QIWVLLLGGIGLAYTLDQWAGHTTPVMLQLTIFGSFISYIYSAPALKLK 670
QIWVLL+ G GLA+ LD W+GH P + + I GSFI+YIYSAP LKLK
Sbjct: 143 QIWVLLIAGYGLAFALDVWSGHEFPTITAIAIIGSFIAYIYSAPPLKLK 191
EST assemble image
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clone |
accession |
position |
1 |
MX216a04_r |
BP089919 |
1 |
307 |
2 |
MXL011f11_r |
BP093665 |
5 |
520 |
3 |
LC068c06_r |
AV623758 |
120 |
671 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute