KCC002983A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002983A_C01 KCC002983A_c01
gtgtggttgtcgaTCATGATGGCACGAACTGGTGCTATCTTTGTCGCGCTCGCCGTTCTG
GCAACACTGGCCAGCGCGATATCTGATCAGGGCATCGTGTACCTGGATGATTATACGTTC
GACAAGGTGGTGGACGGGTCCCGTGATGTGCTAGTGCGCTTTGATAAGGAGTATGCTTGG
GGAGATGAGCATGACGCCTTCAAGGACCTGGCGAAGAAGGTGGGCGAGGCCGGCACCTCG
GTGCTGGTGGCCAGTGTGCCTGTGGCCAAGCGGGAGTTCGAGCCCAAGAACGTGGAACTG
GCGGAGAAGTACAAGGCTGACGACGAGGGCAAGTTCCCGCTCTACTACATCTTCCGCAAG
GGCGCCACCGAGCCGCTGCGCTACACCGGCGCCGGCAAGAAGGCCAACGACCTGCTGGCC
TGGTTGGCACAGAACACCGGGGCCTTCTTCGGCCTCAAGGGTCAGGTGAAGGAGCTGGAC
GCGTTGGCTCGGGAGCTGATGGCGGCGGCGGACGCGGCGGGCCGCAAGGCGGTGCTGGCC
AAGGCCGAGGGGCTGCTGGGCGGCGTGGCGGCGGAGCACCAGGAGGCCGCAAAGTACTAC
GTCAAGGTGATGGGAAAGGCGGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002983A_C01 KCC002983A_c01
         (624 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_446413.1| endoplasmic retuclum protein 29 [Rattus norvegi...   108  6e-23
ref|NP_006808.1| endoplasmic reticulum protein 29 precursor; end...   107  1e-22
ref|NP_080405.1| endoplasmic reticulum protein ERp29 precursor; ...   104  9e-22
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    82  8e-15
emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox...    79  7e-14

>ref|NP_446413.1| endoplasmic retuclum protein 29 [Rattus norvegicus]
           gi|2507015|sp|P52555|ER29_RAT Endoplasmic reticulum
           protein ERp29 precursor (ERp31)
           gi|1772594|emb|CAA71313.1| ERp29 precursor [Rattus
           norvegicus] gi|2317800|gb|AAC15239.1| endoplasmic
           reticulum protein ERp29 precursor [Rattus norvegicus]
           gi|13177515|gb|AAF93170.1| endoplasmic reticulum protein
           29 precursor [Rattus norvegicus]
          Length = 260

 Score =  108 bits (270), Expect = 6e-23
 Identities = 68/184 (36%), Positives = 108/184 (57%), Gaps = 1/184 (0%)
 Frame = +1

Query: 70  ASAISDQGIVYLDDYTFDKVVDGSRDVLVRFDKEYAWGDEHDAFKDLAKKVGEAGTSVLV 249
           AS +  +G + LD  TF KV+  S+ VLV+FD +Y +G++ D FK LA+    +   +LV
Sbjct: 30  ASGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAEN-SASSDDLLV 88

Query: 250 ASVPVAKREFEPKNVELAEKYKADDEGKFPLYYIFRKGATE-PLRYTGAGKKANDLLAWL 426
           A V ++    +  N+EL+EKYK D E  +P++Y+FR G  E P+ Y+GA  K   +  WL
Sbjct: 89  AEVGISDYG-DKLNMELSEKYKLDKE-SYPVFYLFRDGDFENPVPYSGA-VKVGAIQRWL 145

Query: 427 AQNTGAFFGLKGQVKELDALARELMAAADAAGRKAVLAKAEGLLGGVAAEHQEAAKYYVK 606
            +  G + G+ G +   DALA + + A+    R+A+L + +  L GV    ++ A  Y+K
Sbjct: 146 -KGQGVYLGMPGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWASQYLK 204

Query: 607 VMGK 618
           +MGK
Sbjct: 205 IMGK 208

>ref|NP_006808.1| endoplasmic reticulum protein 29 precursor; endoplasmic reticulum
           lumenal protein ERp28 [Homo sapiens]
           gi|6015110|sp|P30040|ER29_HUMAN Endoplasmic reticulum
           protein ERp29 precursor (ERp31) (ERp28)
           gi|7512406|pir||T09549 endoplasmic-reticulum-lumenal
           protein 28 - human gi|3413293|emb|CAA64397.1| ERp28
           [Homo sapiens]
          Length = 261

 Score =  107 bits (267), Expect = 1e-22
 Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
 Frame = +1

Query: 73  SAISDQGIVYLDDYTFDKVVDGSRDVLVRFDKEYAWGDEHDAFKDLAKKVGEAGTSVLVA 252
           S +  +G + LD  TF KV+  S+ VLV+FD +Y +G++ D FK LA+    +   +LVA
Sbjct: 31  SGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAEN-SASSDDLLVA 89

Query: 253 SVPVAKREFEPKNVELAEKYKADDEGKFPLYYIFRKGATE-PLRYTGAGKKANDLLAWLA 429
            V ++    +  N+EL+EKYK D E  +P++Y+FR G  E P+ YTGA  K   +  WL 
Sbjct: 90  EVGISDYG-DKLNMELSEKYKLDKE-SYPVFYLFRDGDFENPVPYTGA-VKVGAIQRWL- 145

Query: 430 QNTGAFFGLKGQVKELDALARELMAAADAAGRKAVLAKAEGLLGGVAAEHQEAAKYYVKV 609
           +  G + G+ G +   DALA E + A+    R+A+L + +  L  V    ++ A+ Y+K+
Sbjct: 146 KGQGVYLGMPGCLPVYDALAGEFIRASGVEARQALLKQGQDNLSSVKETQKKWAEQYLKI 205

Query: 610 MGK 618
           MGK
Sbjct: 206 MGK 208

>ref|NP_080405.1| endoplasmic reticulum protein ERp29 precursor; endoplasmic retuclum
           protein 29 [Mus musculus]
           gi|14285434|sp|P57759|ER29_MOUSE Endoplasmic reticulum
           protein ERp29 precursor gi|12836245|dbj|BAB23570.1|
           unnamed protein product [Mus musculus]
           gi|12844948|dbj|BAB26559.1| unnamed protein product [Mus
           musculus] gi|16877776|gb|AAH17125.1| Endoplasmic
           reticulum protein ERp29 precursor [Mus musculus]
          Length = 262

 Score =  104 bits (260), Expect = 9e-22
 Identities = 67/183 (36%), Positives = 105/183 (56%), Gaps = 1/183 (0%)
 Frame = +1

Query: 73  SAISDQGIVYLDDYTFDKVVDGSRDVLVRFDKEYAWGDEHDAFKDLAKKVGEAGTSVLVA 252
           S +  +G + LD  TF KV+  S+ VLV+FD +Y +G++ D FK LA+    +   +LVA
Sbjct: 33  SGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAEN-SASSEELLVA 91

Query: 253 SVPVAKREFEPKNVELAEKYKADDEGKFPLYYIFRKGATE-PLRYTGAGKKANDLLAWLA 429
            V ++    +  N+EL+EKYK D E  +P++Y+FR G  E P+ Y GA  K   +  WL 
Sbjct: 92  EVGISDYG-DKLNMELSEKYKLDKE-SYPVFYLFRDGDLENPVLYNGA-VKVGAIQRWL- 147

Query: 430 QNTGAFFGLKGQVKELDALARELMAAADAAGRKAVLAKAEGLLGGVAAEHQEAAKYYVKV 609
           +  G + G+ G +   DALA E + A+    R+A+L + +  L  V    ++ A  Y+K+
Sbjct: 148 KGQGVYLGMPGCLPAYDALAGEFIKASSIEARQAILKQGQDGLLSVKETEKKWASQYLKI 207

Query: 610 MGK 618
           MGK
Sbjct: 208 MGK 210

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 81.6 bits (200), Expect = 8e-15
 Identities = 61/181 (33%), Positives = 67/181 (36%), Gaps = 4/181 (2%)
 Frame = -3

Query: 619 PFPSP*RSTLRPPGAPPPRRPAAPRPWPAP--PCGPPRPPPPSAPEPTRPAPSPDP*GRR 446
           P  +P R    PP A PP  PAAP P  AP  P  PP PPPP A  P  P P P P   +
Sbjct: 60  PPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPK 119

Query: 445 RPRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAW 266
           +P       P    P+       AAR                 P  +PP P   A     
Sbjct: 120 QPSPPPAAAPQQHAPTPPPPAPPAAR-----------------PAPTPPAPPPAAAPQHA 162

Query: 265 PQAHWPPAPRCRPRPPSSP--GP*RRHAHLPKHTPYQSALAHHGTRPPPCRTYNHPGTRC 92
           P    PPA R  P PP  P  GP  R    P  TP   A       PPP      PG+  
Sbjct: 163 PPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVA-------PPPAAPTARPGSPA 215

Query: 91  P 89
           P
Sbjct: 216 P 216

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 45/144 (31%), Positives = 54/144 (37%), Gaps = 4/144 (2%)
 Frame = -3

Query: 622 PPFPSP*RSTLR-PPGAPPPRRPAAPRPWPAPPCGP---PRPPPPSAPEPTRPAPSPDP* 455
           PP P P  +    PP  PPP     P P P PP GP   P P P + P P  P P+    
Sbjct: 150 PPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAP-- 207

Query: 454 GRRRPRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWART 275
              RP    P       P+     + A    P       G+ P   P   P  P    R 
Sbjct: 208 -TARPGSPAPAATPAPTPTPAPTATPAPTATPA-----PGSTPGAPPAGRPGAPPPGVRP 261

Query: 274 PAWPQAHWPPAPRCRPRPPSSPGP 203
            + P A  PPAP   P P ++P P
Sbjct: 262 GSPPAAGSPPAPGATPAPTTTPAP 285

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 62/176 (35%), Positives = 67/176 (37%), Gaps = 21/176 (11%)
 Frame = -3

Query: 583 PGAPPPRRPAAP----RPWPAPPCGPPRPPPPSAPEP-TRPAP---SPDP*GRRRPRCSV 428
           PGAPP  RP AP    RP   P  G P P P + P P T PAP   +  P GR  P  S 
Sbjct: 244 PGAPPAGRPGAPPPGVRPGSPPAAGSP-PAPGATPAPTTTPAPGGTATPPSGRPGP-AST 301

Query: 427 PTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWPQAHW- 251
           P   A             A   P GR   AG  P  Q  T PP     A TPA P     
Sbjct: 302 PAPGAATPAPTATPAPGGALTPPPGR-PGAGPTPGPQGGT-PPAGAPAAGTPAAPPQAGG 359

Query: 250 ----PPAPRCRPRPPSSPG-------P*RRHAHLPKHTP-YQSALAHHGTRPPPCR 119
               P AP     P + PG       P R     P  TP +Q+A       PPP R
Sbjct: 360 LPARPAAPAGAAAPSTVPGSAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPPPPR 415

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 45/153 (29%), Positives = 52/153 (33%)
 Frame = -3

Query: 532 PPCGPPRPPPPSAPEPTRPAPSPDP*GRRRPRCSVPTRPAGRWPSCRRRCSAAARWRPCG 353
           PP GPP   PP+AP   RPA  P       P  + P  PA   P                
Sbjct: 51  PPKGPPGAAPPAAP--ARPAAPP-------PAAAPPHPPAAPPP---------------- 85

Query: 352 RCSRAGTCPRRQPCTSPPVPRSWARTPAWPQAHWPPAPRCRPRPPSSPGP*RRHAHLPKH 173
               A   PR  P   PP P   A  PA P    PPA   +P PP +  P +     P  
Sbjct: 86  ----AAAPPR--PAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPP 139

Query: 172 TPYQSALAHHGTRPPPCRTYNHPGTRCPDQISR 74
            P  +  A     PPP     H     P   +R
Sbjct: 140 APPAARPAPTPPAPPPAAAPQHAPPPPPPPAAR 172

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 50/185 (27%), Positives = 59/185 (31%), Gaps = 8/185 (4%)
 Frame = -3

Query: 619 PFPSP*RSTLRPPGAPPPRRPAAPRPWP-APPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           P P+P   T  P   P P    AP   P APP G P  PPP     + PA    P     
Sbjct: 220 PAPTP---TPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGAT 276

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P  +    P G       R   A+   P          P      +PP  R  A     P
Sbjct: 277 PAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGP 336

Query: 262 QAHWPPAPRCRPRPPSSPGP*RRHAHLPKHTPYQSALAHHGT-------RPPPCRTYNHP 104
           Q   PPA       P++P    +   LP      +  A   T        PPP R    P
Sbjct: 337 QGGTPPAGAPAAGTPAAP---PQAGGLPARPAAPAGAAAPSTVPGSAAATPPPNRAQFAP 393

Query: 103 GTRCP 89
            T  P
Sbjct: 394 PTVTP 398

>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
           nagariensis]
          Length = 409

 Score = 78.6 bits (192), Expect = 7e-14
 Identities = 58/168 (34%), Positives = 65/168 (38%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           PP P P  S   PP  PPP  P+ P P P PP  PP PPPP  P P  P+P P P     
Sbjct: 102 PPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSP----- 156

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P    P+ P    PS                       P   P  SPP PR     P  P
Sbjct: 157 PPSPPPSPPPSPPPS-------------------PPPSPPPSPPPSPP-PRPPPSPPPSP 196

Query: 262 QAHWPPAPRCRPRPPSSPGP*RRHAHLPKHTPYQSALAHHGTRPPPCR 119
               PP+P   PRPP SP P          +P   + +    RPPP R
Sbjct: 197 PPSPPPSP--PPRPPPSPNP---------PSPRPPSPSPPSPRPPPRR 233

 Score = 76.3 bits (186), Expect = 3e-13
 Identities = 63/178 (35%), Positives = 68/178 (37%), Gaps = 4/178 (2%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPP-RPPPPSAPEPTRPAPSPDP*GRR 446
           PP PSP      P   PPPRRP  P P P PP  PP  PPPP  P P+ P P P P    
Sbjct: 219 PPSPSP------PSPRPPPRRPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPP---P 269

Query: 445 RPRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPV-PRSWARTPA 269
            P   +P  P+   PS           RP          PR  P   PP  P   +  P 
Sbjct: 270 SPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPP 329

Query: 268 WPQAHWPPAPRCRPRPPSSPGP*RRHAHLPKHTPYQSALAHHGTRP--PPCRTYNHPG 101
            P    PP PR  P  P+ P P       PK  P  S       RP  PP R    PG
Sbjct: 330 RPPPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRPPRPPRRPPTAPG 387

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 64/191 (33%), Positives = 68/191 (35%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           PP PSP      PP  PP   P  P P P PP  PP PPPP  P P  P P P P     
Sbjct: 82  PPSPSP-----PPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPP 136

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P    P  P    PS                       P   P + PP P      P  P
Sbjct: 137 PNPPPPPPPPPPSPS----------------------PPPSPPPSPPPSP------PPSP 168

Query: 262 QAHWPPAPRCRPRPPSSPGP*RRHAHLPKHTPYQSALAHHGTRPPPCRTYNHPGTRCPDQ 83
               PP+P   P PP SP P  R    P  +P  S       RPPP  + N P  R P  
Sbjct: 169 PPSPPPSP--PPSPPPSPPP--RPPPSPPPSPPPSPPPSPPPRPPP--SPNPPSPRPPSP 222

Query: 82  ISRWPVLPERR 50
               P  P RR
Sbjct: 223 SPPSPRPPPRR 233

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 58/171 (33%), Positives = 64/171 (36%), Gaps = 5/171 (2%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           PP P P      PP  PPP  P +P P P PP  PP  PPP  P P  P P+P P     
Sbjct: 93  PPVPPP------PPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPP 146

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P    P       P      S      P    S   + P R P + PP P      P  P
Sbjct: 147 PPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPP--PSPPPSP 204

Query: 262 QAHWPPAPR-CRPRPPS----SPGP*RRHAHLPKHTPYQSALAHHGTRPPP 125
               PP+P    PRPPS    SP P  R    P  +P          RPPP
Sbjct: 205 PPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSP-------PPPRPPP 248

 Score = 65.1 bits (157), Expect = 8e-10
 Identities = 58/190 (30%), Positives = 63/190 (32%), Gaps = 2/190 (1%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           PP  SP   T  PPG PPP       P P PP  PP P PP  P P+ P P P P     
Sbjct: 41  PPPGSPPPGT-PPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPP 99

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P    P  P    P                        P   P   PP P      P  P
Sbjct: 100 PPPPPPPPPPSPPPP-----------------PPPPPPPPPSPPPPPPPPPPPPPNPPPP 142

Query: 262 QAHWPPAPRCRPRPPSS--PGP*RRHAHLPKHTPYQSALAHHGTRPPPCRTYNHPGTRCP 89
               PP+P   P PP S  P P       P  +P  S       RPPP    + P +  P
Sbjct: 143 PPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPP 202

Query: 88  DQISRWPVLP 59
               R P  P
Sbjct: 203 SPPPRPPPSP 212

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 56/188 (29%), Positives = 65/188 (33%)
 Frame = -3

Query: 622 PPFPSP*RSTLRPPGAPPPRRPAAPRPWPAPPCGPPRPPPPSAPEPTRPAPSPDP*GRRR 443
           PP  SP  + +  P APPP  P    P   PP G P PP PS PE   P P P P   + 
Sbjct: 25  PPRRSPVVALVETPAAPPPGSP----PPGTPPPGVP-PPTPSGPEHPPPPPPPPPPPPQP 79

Query: 442 PRCSVPTRPAGRWPSCRRRCSAAARWRPCGRCSRAGTCPRRQPCTSPPVPRSWARTPAWP 263
           P    P+ P    P             P          P   P   PP P     +P  P
Sbjct: 80  PLPPSPSPPPPPPPPV-----------PPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPP 128

Query: 262 QAHWPPAPRCRPRPPSSPGP*RRHAHLPKHTPYQSALAHHGTRPPPCRTYNHPGTRCPDQ 83
               PP P   P PP  P P    +  P  +P  S        PPP    + P +  P  
Sbjct: 129 PPPPPPPPPNPPPPPPPPPP----SPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSP 184

Query: 82  ISRWPVLP 59
             R P  P
Sbjct: 185 PPRPPPSP 192



EST assemble image


clone accession position
1 MXL040a10_r BP095330 1 378
2 MX204d03_r BP089283 14 358
3 LC067g03_r AV623721 96 624




Chlamydomonas reinhardtii
Kazusa DNA Research Institute