Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002982A_C01 KCC002982A_c01
(556 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_069281.3| similar to fibroin-3 [Homo sapiens] 40 0.021
gb|AAP82232.1| ORF1 [Rubella virus] 39 0.036
ref|NP_036046.1| 5'-3' exoribonuclease 1 [Mus musculus] gi|75137... 38 0.10
ref|XP_130959.1| RIKEN cDNA 2210403N08 [Mus musculus] gi|3385971... 37 0.18
gb|AAH56360.1| 2210403N08Rik protein [Mus musculus] 37 0.18
>ref|XP_069281.3| similar to fibroin-3 [Homo sapiens]
Length = 842
Score = 40.0 bits (92), Expect = 0.021
Identities = 26/72 (36%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Frame = -2
Query: 537 HPLHGALCHFSRLAGAGLGTCRCPLVCWCSPCSP------PARRPLACRAQTEPRSVK*P 376
HP G H S G TC CP C C P +P P R PL R PR P
Sbjct: 575 HPQRGRHRHLSGFRSTGSCTCPCPPTCPCPPGAPDPHVPLPPRVPLPPRVPLPPRVPLHP 634
Query: 375 DWSSPATDPACH 340
P PA H
Sbjct: 635 MCPCPPCVPAPH 646
>gb|AAP82232.1| ORF1 [Rubella virus]
Length = 2116
Score = 39.3 bits (90), Expect = 0.036
Identities = 31/82 (37%), Positives = 34/82 (40%), Gaps = 1/82 (1%)
Frame = -2
Query: 537 HPLHGALCHFSRLAGAGLGTCRCPLVCWCSPCSPPARRPLA-CRAQTEPRSVK*PDWSSP 361
HP L H S L GAGL R SPP PLA C A RS +
Sbjct: 970 HPDRATLMHASVLVGAGLAARR---------VSPPPTEPLASCPADDPGRSTQ-----RT 1015
Query: 360 ATDPACHRHAASVPSSRGC*RC 295
A+ PA A+ P SRGC C
Sbjct: 1016 ASPPAAPPGDAAAPESRGCQGC 1037
>ref|NP_036046.1| 5'-3' exoribonuclease 1 [Mus musculus] gi|7513771|pir||T30244
phosphodiesterase I (EC 3.1.4.1) - mouse
gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 37.7 bits (86), Expect = 0.10
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +2
Query: 107 CARGSGVACIAERLECLAGRQHCTTAQQAYT*H-GPQPSPSPAVHRPPA-LTGIHH*PTY 280
C+ G G L L+ C T Q T PQPS S P L G++H P
Sbjct: 1156 CSPGRGYRLPTSALVNLSHGSRCETGNQKLTAIVKPQPSVSHCSAAPSGHLGGLNHSPQS 1215
Query: 281 PAAL*HL*QPREEGTDAAC-LWQAGSVAGLLQSGYLT--ERGSV*ARHASGLRAGGEHGL 451
P Q +G D C +WQ+ AG +Q T E+G+V + S + G + G
Sbjct: 1216 PFLPT---QVPTKGDDEFCNIWQSLQGAGKIQHLQPTVQEKGAVLPQEISQVTEGHKSGF 1272
Query: 452 HQHTSGHRQVPNPAPARREKWHSAP 526
H+ H+Q + + + ++ + +P
Sbjct: 1273 TDHSVRHQQRKHDSQRKFKEEYKSP 1297
>ref|XP_130959.1| RIKEN cDNA 2210403N08 [Mus musculus] gi|33859712|ref|NP_082464.1|
RIKEN cDNA 2210403N08 [Mus musculus]
gi|26328159|dbj|BAC27820.1| unnamed protein product [Mus
musculus] gi|26333387|dbj|BAC30411.1| unnamed protein
product [Mus musculus] gi|26335265|dbj|BAC31333.1|
unnamed protein product [Mus musculus]
gi|34784960|gb|AAH57034.1| Unknown (protein for
MGC:67218) [Mus musculus]
Length = 431
Score = 37.0 bits (84), Expect = 0.18
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Frame = +1
Query: 175 HHSPAGVHLTWTTTQPKPSRPQTTST--YWHSPLAHVPRSALAPLTAARGRHGCRVPVAS 348
HH P G+ + P P+ QT +W LA R T R P S
Sbjct: 200 HHLPVGLQQAPAPSCPPPALQQTMQAVLHWGERLAQSLRGTSGESTTDSSTPSARPPAGS 259
Query: 349 WVSRWATPIRLFD*ARLSLSPARKRPARRRRTWAAPAHKWAPASSQSSTGKA 504
W + R++ P + RR T A A + P + Q++ G++
Sbjct: 260 WWDQLTQASRVYASGGTEGFPLLRWGPRRHGTTAEAAQEAPPPTEQTTPGRS 311
>gb|AAH56360.1| 2210403N08Rik protein [Mus musculus]
Length = 893
Score = 37.0 bits (84), Expect = 0.18
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Frame = +1
Query: 175 HHSPAGVHLTWTTTQPKPSRPQTTST--YWHSPLAHVPRSALAPLTAARGRHGCRVPVAS 348
HH P G+ + P P+ QT +W LA R T R P S
Sbjct: 662 HHLPVGLQQAPAPSCPPPALQQTMQAVLHWGERLAQSLRGTSGESTTDSSTPSARPPAGS 721
Query: 349 WVSRWATPIRLFD*ARLSLSPARKRPARRRRTWAAPAHKWAPASSQSSTGKA 504
W + R++ P + RR T A A + P + Q++ G++
Sbjct: 722 WWDQLTQASRVYASGGTEGFPLLRWGPRRHGTTAEAAQEAPPPTEQTTPGRS 773
