Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002980A_C01 KCC002980A_c01
(510 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00030628.1| COG3975: Predicted protease with the C-termin... 36 0.25
dbj|BAB69908.1| ORF1 [TT virus] 35 0.71
ref|NP_174914.1| retroelement pol polyprotein -related [Arabidop... 34 1.2
ref|NP_823711.1| hypothetical protein [Streptomyces avermitilis ... 34 1.2
ref|XP_227155.2| similar to neurobeachin [Rattus norvegicus] 33 2.7
>ref|ZP_00030628.1| COG3975: Predicted protease with the C-terminal PDZ domain
[Burkholderia fungorum]
Length = 702
Score = 36.2 bits (82), Expect = 0.25
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -2
Query: 464 GFLGAGRPTTHLR--CSHCPESQMPRLEPCCNRSARTQTVPRGHRPSEE*RCGAP 306
G + AG H R H + Q PR PC R VPRG PS R G P
Sbjct: 10 GVVDAGPSGAHRRRHLRHRRDRQKPRARPCHERRRHAHGVPRGRPPSARRRAGRP 64
>dbj|BAB69908.1| ORF1 [TT virus]
Length = 750
Score = 34.7 bits (78), Expect = 0.71
Identities = 19/49 (38%), Positives = 27/49 (54%)
Frame = +2
Query: 272 QLVSFLASMPAEERHTFILPMADDPEALFEYVQIGYNKAQGVASGSQDS 418
+LVSF+ S+ A +H F P D+P F+ +Q YNK G + DS
Sbjct: 243 ELVSFVVSL-ASFQHPFCRPQTDNPCVTFQVLQNFYNKCIGTSVNLSDS 290
>ref|NP_174914.1| retroelement pol polyprotein -related [Arabidopsis thaliana]
gi|14475931|gb|AAK62779.1|AC074109_1 retroelement pol
polyprotein, putative [Arabidopsis thaliana]
Length = 492
Score = 33.9 bits (76), Expect = 1.2
Identities = 32/101 (31%), Positives = 44/101 (42%)
Frame = -1
Query: 306 SAGIEARKLTSCPSFAPFTPRSLAAVLNALTTMRNSLSASLLSMLPQNPCHSRNSSPSGC 127
SA I+A S + F L A L L + +SLS L S + H N SP+
Sbjct: 109 SAPIQAPPPPSSETIMEFMLAQLLAGLTKLDSKYDSLSTDLNSKIDNLRSHISNLSPTSA 168
Query: 126 SQQLGRQFAVRLRQAMRISLQHGVHESTQPSST*VAVTNTL 4
S AV LR A +++ S QPSS +A N++
Sbjct: 169 SIN-----AVALRSAKQLNPILQRERSAQPSSFLIAEKNSV 204
>ref|NP_823711.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29606183|dbj|BAC70246.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 595
Score = 33.9 bits (76), Expect = 1.2
Identities = 30/89 (33%), Positives = 41/89 (45%), Gaps = 11/89 (12%)
Frame = -2
Query: 476 GSAPGFLGAGRPTTHLRCSHCPESQMPRLEPC-CNRSARTQTVPRGHRPSEE*RCGAPPP 300
G + G +G GRPTT S ++PR +A ++T G RP + GAP P
Sbjct: 446 GRSNGVVG-GRPTTAGGASGKGGPRIPRGTVIGAEETANSRTAANG-RPGQRGVFGAPEP 503
Query: 299 ASRPGSSRA----------ALASRPSRRD 243
+RPGSS A+ RPS R+
Sbjct: 504 TARPGSSATASRGGAGTSEAVTGRPSARN 532
>ref|XP_227155.2| similar to neurobeachin [Rattus norvegicus]
Length = 1918
Score = 32.7 bits (73), Expect = 2.7
Identities = 29/121 (23%), Positives = 55/121 (44%), Gaps = 11/121 (9%)
Frame = +2
Query: 176 MDNNEADNEFLIVVKAF------KTAAKDRGVKGAKLGQLVSFLASMPAEER-----HTF 322
+D + +I ++AF + KDRGVK +L ++++L +M +E
Sbjct: 655 LDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLL 714
Query: 323 ILPMADDPEALFEYVQIGYNKAQGVASGSQDSASISSELWVDQLPKSLGRYRRTFGRDGK 502
+ M++ P ++ +++ G+ + AS S +WV L K LG + + G K
Sbjct: 715 VALMSEHPASMIP----AFDQRNGIRVIYKLLASKSESIWVQAL-KVLGYFLKHLGHKRK 769
Query: 503 V 505
V
Sbjct: 770 V 770
