Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002979A_C01 KCC002979A_c01
(531 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA92139.1| UL26 protease 37 0.16
ref|XP_342677.1| similar to Rho guanine nucleotide exchange fact... 37 0.16
emb|CAE03850.1| OSJNBb0089K06.12 [Oryza sativa (japonica cultiva... 37 0.21
ref|ZP_00082015.1| COG0455: ATPases involved in chromosome parti... 36 0.27
ref|NP_648164.1| extra-extra CG8254-PA [Drosophila melanogaster]... 36 0.27
>gb|AAA92139.1| UL26 protease
Length = 638
Score = 37.0 bits (84), Expect = 0.16
Identities = 43/156 (27%), Positives = 55/156 (34%), Gaps = 10/156 (6%)
Frame = -2
Query: 440 VPTRGCQCKLSSHMSKQSMSLPPVLCAHKQPASPRPY---APLTAITSPCH--PLVGTGK 276
V R Q ++ H Q+ + A PA R Y AP TSP P
Sbjct: 230 VAERRRQAGIAGHTYLQASEKFKIWGAESAPAPERGYKTGAPGAMDTSPAASVPAPQVAV 289
Query: 275 MLRQVSPHIRTQGAYP-----NTTT*TACPAANTRGEGLPAWSPKKLQTARCDTNLATIG 111
RQV+ + ++P N + + PA G+G W P A L T
Sbjct: 290 RARQVASSSSSSSSFPAPADMNPVSASGAPAPPPPGDGSYLWIP-----ASHYNQLVTGQ 344
Query: 110 GHPHAPPLCWCDPIRSGTAGYLH*RQFLSPTLP*AP 3
P PPL C +GT Y H SP P P
Sbjct: 345 SAPRHPPLTACGLPAAGTVAYGHPGAGPSPHYPPPP 380
>ref|XP_342677.1| similar to Rho guanine nucleotide exchange factor 5; oncogene TIM;
transforming immortalized mammary oncogene; guanine
nucleotide regulatory protein TIM [Rattus norvegicus]
Length = 1589
Score = 37.0 bits (84), Expect = 0.16
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
Frame = -2
Query: 506 HHTNRQCTCRLPCNKPAPPQNGVPTRGCQCKLSSHMSKQSMSLPPVLCAHKQPASPRPYA 327
HHT RL NKP PP +P SS++S+ LPPV P+S P
Sbjct: 791 HHTQTSIPSRLRYNKPLPPTPDMPEPCHSSISSSNISRIYRPLPPVPIT--DPSSEPPPL 848
Query: 326 PLTAITSPCHPLVGTGKMLRQVSPHIRTQGAYPNTTT--*TACPAANTRG-EGLPAWSPK 156
P + VG + Q +P Q +T + T+ P A R E LP
Sbjct: 849 PPKSRERSRSVQVGVMHSMGQANPRTTGQDWTVSTLSVGRTSWPPATGRSTESLP----- 903
Query: 155 KLQTARCDTNLA 120
T+RC++ ++
Sbjct: 904 --PTSRCNSEVS 913
>emb|CAE03850.1| OSJNBb0089K06.12 [Oryza sativa (japonica cultivar-group)]
Length = 146
Score = 36.6 bits (83), Expect = 0.21
Identities = 25/92 (27%), Positives = 35/92 (37%)
Frame = -2
Query: 461 PAPPQNGVPTRGCQCKLSSHMSKQSMSLPPVLCAHKQPASPRPYAPLTAITSPCHPLVGT 282
PAPP +G+P LPP A ++P P P I +PC P
Sbjct: 52 PAPPSDGIPA----------------LLPPAPLACERPVQPPP----VGIPAPCTPASTN 91
Query: 281 GKMLRQVSPHIRTQGAYPNTTT*TACPAANTR 186
RQ P +R +P+ + P NT+
Sbjct: 92 AATCRQHRPQLR---VFPSAVSKLEAPVGNTK 120
>ref|ZP_00082015.1| COG0455: ATPases involved in chromosome partitioning [Geobacter
metallireducens]
Length = 463
Score = 36.2 bits (82), Expect = 0.27
Identities = 27/75 (36%), Positives = 33/75 (44%)
Frame = -2
Query: 461 PAPPQNGVPTRGCQCKLSSHMSKQSMSLPPVLCAHKQPASPRPYAPLTAITSPCHPLVGT 282
P PP P Q +S + ++ PV K PA P P P A T P HP VGT
Sbjct: 292 PQPPAPAAPPTAAQ---ASSPGATAPAVTPV----KIPAQPEPQRPPQAATPP-HPPVGT 343
Query: 281 GKMLRQVSPHIRTQG 237
G L Q+ I +G
Sbjct: 344 GGGLAQLPSFIPREG 358
>ref|NP_648164.1| extra-extra CG8254-PA [Drosophila melanogaster]
gi|7295179|gb|AAF50503.1| CG8254-PA [Drosophila
melanogaster] gi|19527577|gb|AAL89903.1| RE39081p
[Drosophila melanogaster]
Length = 525
Score = 36.2 bits (82), Expect = 0.27
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Frame = -1
Query: 348 RIATPLRPSDRDNQSLPSARRHGKNVAAGIATY---------PHTGCLPQHY--YLNRLP 202
R + P+ P D Q P H ++++ ++ + PH+ PQ + Y P
Sbjct: 316 RSSPPISPGCEDQQQ-PHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHP 374
Query: 201 RRQYARGGLACVEPKKIANSPLRHKSGHNWRPPTCSSTLLVRSHPLRYSRVSTLAPVP 28
+ A+GG A P + P+ GHN+ P L R+ L + R+ LA P
Sbjct: 375 YQLLAQGGSAFHRPLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHH-RIPELAAYP 431
