KCC002974A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002974A_C01 KCC002974A_c01
taGAAACATGGCCGCCACTATGCAGATGAACAAGCAGGCCACGCGCCAGGCTGCTCAGCA
GGGCCGCGTCGCCCCTTTCAAGGCGACCGGTGTTGTGCGCAAGGTCGCTCAGCTGCCCAG
CTCCACCTTCTCCGGCGTGACCGTGCCTCAGCGTCAGTTCGCTGTCAGCGGTGCCCGCAG
CGTGTCGCGCGCCGTGCAGTCGGTGTTCGCTGTTAAGGATGGCGCTGCCCTGGAGGGCCG
CAAGCTCCGCGTTGCCGTCATCGGCGGTGGCCCGTCGGGTGCCTGCGCTGCGGAGACCCT
GGCTAAGGGTGGTGTGGAGACCTTCCTGCTGGAGCGCAAGCTGGACAACTGCAAGCCCTG
CGGTGGTGCCATCCCTCTGTGCATGGTTGAGGAGTTCGACCTGCCCATGGAGATTATTGA
CCGGCGCGTCACCAAGATGAAGATGATCTCCCCCTCCAACCGCGAGGTCGATGTGGGCAA
GACCCTCAGCGAGACCGAGTGGATTGGCATGTGCCGCCGCGAGGTCGTTTGATGACTACC
TGCGCAACCGTGCCCAGAAGCTGGGCGCCAACATCGTGAACGGCCTGTTCATGCGCTCGG
AGCAGCAGAGCGCTGAGGGCCCCTTCACCATCCACTACAACAGCTACGAGGATGGCAGCA
AGATGGGCAAGCCCGCCACCCTGGAGGTCGACATGATCATCGGTGCCGACGGCGCCAACA
GCCGCATCGCCAAGGAGATCGACGCCGGCGAGTACGACTACGCCATTGCCTTCCAGGAGC
GCATCCGCATCCCCGACGACAAGATGAAGTACTATG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002974A_C01 KCC002974A_c01
(816 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD28640.2| geranylgeranyl hydrogenase [Glycine max] 168 1e-70
gb|AAN31803.1| putative geranylgeranyl reductase [Arabidopsis th... 164 2e-69
emb|CAA74372.1| geranylgeranyl reductase [Arabidopsis thaliana] 164 2e-69
ref|NP_177587.1| geranylgeranyl reductase [Arabidopsis thaliana]... 164 2e-69
emb|CAA07683.1| geranylgeranyl reductase [Nicotiana tabacum] 165 5e-68
>gb|AAD28640.2| geranylgeranyl hydrogenase [Glycine max]
Length = 462
Score = 168 bits (425), Expect(2) = 1e-70
Identities = 82/109 (75%), Positives = 92/109 (84%)
Frame = +2
Query: 203 VFAVKDGAALEGRKLRVAVIGGGPSGACAAETLAKGGVETFLLERKLDNCKPCGGAIPLC 382
V A K L GR LRVAV+GGGP+G AAETLAKGGVETFL+ERK+DNCKPCGGAIPLC
Sbjct: 37 VLAGKFSPKLNGRNLRVAVVGGGPAGGAAAETLAKGGVETFLIERKMDNCKPCGGAIPLC 96
Query: 383 MVEEFDLPMEIIDRRVTKMKMISPSNREVDVGKTLSETEWIGMCRREVV 529
MV EFDLP++IIDRRVTKMKMISPSN VD+G+TL E+IGM RREV+
Sbjct: 97 MVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVL 145
Score = 121 bits (304), Expect(2) = 1e-70
Identities = 56/97 (57%), Positives = 78/97 (79%), Gaps = 2/97 (2%)
Frame = +3
Query: 531 DDYLRNRAQKLGANIVNGLFMRSE-QQSAEGPFTIHYNSYEDGSK-MGKPATLEVDMIIG 704
D YLR+RA++ GAN++NGLF++ + + P+ +HY+SY+ + +G+ TLEVD +IG
Sbjct: 146 DAYLRDRAKEYGANVINGLFLKMDIPKDKNSPYVLHYSSYDGKTNGVGEKRTLEVDAVIG 205
Query: 705 ADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKMKYY 815
ADGANSR+AK IDAG+Y+YAIAFQER++IPDDKM YY
Sbjct: 206 ADGANSRVAKSIDAGDYEYAIAFQERVKIPDDKMVYY 242
>gb|AAN31803.1| putative geranylgeranyl reductase [Arabidopsis thaliana]
Length = 467
Score = 164 bits (416), Expect(2) = 2e-69
Identities = 86/142 (60%), Positives = 107/142 (74%)
Frame = +2
Query: 104 VAQLPSSTFSGVTVPQRQFAVSGARSVSRAVQSVFAVKDGAALEGRKLRVAVIGGGPSGA 283
V+ +PSS +++PQR+ ++ V A + L RKLRVAVIGGGP+G
Sbjct: 24 VSHVPSS----LSLPQRRTSLR-----------VTAARATPKLSNRKLRVAVIGGGPAGG 68
Query: 284 CAAETLAKGGVETFLLERKLDNCKPCGGAIPLCMVEEFDLPMEIIDRRVTKMKMISPSNR 463
AAETLA+GG+ET L+ERK+DNCKPCGGAIPLCMV EF+LP++IIDRRVTKMKMISPSN
Sbjct: 69 AAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNI 128
Query: 464 EVDVGKTLSETEWIGMCRREVV 529
VD+G+TL E E+IGM RREV+
Sbjct: 129 AVDIGRTLKEHEYIGMVRREVL 150
Score = 121 bits (303), Expect(2) = 2e-69
Identities = 57/97 (58%), Positives = 74/97 (75%), Gaps = 2/97 (2%)
Frame = +3
Query: 531 DDYLRNRAQKLGANIVNGLFMRSEQ-QSAEGPFTIHYNSYED-GSKMGKPATLEVDMIIG 704
D YLR RA+K GA ++NGLF++ + ++ + P+T+HY Y+ G T+EVD +IG
Sbjct: 151 DAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKAGATGTKKTMEVDAVIG 210
Query: 705 ADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKMKYY 815
ADGANSR+AK IDAG+YDYAIAFQERIRIPD+KM YY
Sbjct: 211 ADGANSRVAKSIDAGDYDYAIAFQERIRIPDEKMTYY 247
>emb|CAA74372.1| geranylgeranyl reductase [Arabidopsis thaliana]
Length = 472
Score = 164 bits (416), Expect(2) = 2e-69
Identities = 86/142 (60%), Positives = 107/142 (74%)
Frame = +2
Query: 104 VAQLPSSTFSGVTVPQRQFAVSGARSVSRAVQSVFAVKDGAALEGRKLRVAVIGGGPSGA 283
V+ +PSS +++PQR+ ++ V A + L RKLRVAVIGGGP+G
Sbjct: 29 VSHVPSS----LSLPQRRTSLR-----------VTAARATPKLSNRKLRVAVIGGGPAGG 73
Query: 284 CAAETLAKGGVETFLLERKLDNCKPCGGAIPLCMVEEFDLPMEIIDRRVTKMKMISPSNR 463
AAETLA+GG+ET L+ERK+DNCKPCGGAIPLCMV EF+LP++IIDRRVTKMKMISPSN
Sbjct: 74 AAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNI 133
Query: 464 EVDVGKTLSETEWIGMCRREVV 529
VD+G+TL E E+IGM RREV+
Sbjct: 134 AVDIGRTLKEHEYIGMVRREVL 155
Score = 120 bits (302), Expect(2) = 2e-69
Identities = 57/97 (58%), Positives = 75/97 (76%), Gaps = 2/97 (2%)
Frame = +3
Query: 531 DDYLRNRAQKLGANIVNGLFMRSEQ-QSAEGPFTIHYNSYEDGS-KMGKPATLEVDMIIG 704
D YLR RA+K GA ++NGLF++ + ++ + P+T+HY Y+ + G T+EVD +IG
Sbjct: 156 DAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIG 215
Query: 705 ADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKMKYY 815
ADGANSR+AK IDAG+YDYAIAFQERIRIPD+KM YY
Sbjct: 216 ADGANSRVAKSIDAGDYDYAIAFQERIRIPDEKMTYY 252
>ref|NP_177587.1| geranylgeranyl reductase [Arabidopsis thaliana]
gi|25326665|pir||F96773 geranylgeranyl reductase,
47568-49165 [imported] - Arabidopsis thaliana
gi|12324810|gb|AAG52372.1|AC011765_24 geranylgeranyl
reductase; 47568-49165 [Arabidopsis thaliana]
gi|15292919|gb|AAK92830.1| putative geranylgeranyl
reductase [Arabidopsis thaliana]
gi|15450455|gb|AAK96521.1| At1g74470/F1M20_15
[Arabidopsis thaliana] gi|16648981|gb|AAL24342.1|
geranylgeranyl reductase [Arabidopsis thaliana]
gi|18700167|gb|AAL77695.1| At1g74470/F1M20_15
[Arabidopsis thaliana] gi|20259041|gb|AAM14236.1|
putative geranylgeranyl reductase [Arabidopsis thaliana]
gi|20857316|gb|AAM26711.1| At1g74470/F1M20_15
[Arabidopsis thaliana] gi|23397186|gb|AAN31876.1|
putative geranylgeranyl reductase [Arabidopsis thaliana]
gi|27311931|gb|AAO00931.1| geranylgeranyl reductase
[Arabidopsis thaliana]
Length = 467
Score = 164 bits (416), Expect(2) = 2e-69
Identities = 86/142 (60%), Positives = 107/142 (74%)
Frame = +2
Query: 104 VAQLPSSTFSGVTVPQRQFAVSGARSVSRAVQSVFAVKDGAALEGRKLRVAVIGGGPSGA 283
V+ +PSS +++PQR+ ++ V A + L RKLRVAVIGGGP+G
Sbjct: 24 VSHVPSS----LSLPQRRTSLR-----------VTAARATPKLSNRKLRVAVIGGGPAGG 68
Query: 284 CAAETLAKGGVETFLLERKLDNCKPCGGAIPLCMVEEFDLPMEIIDRRVTKMKMISPSNR 463
AAETLA+GG+ET L+ERK+DNCKPCGGAIPLCMV EF+LP++IIDRRVTKMKMISPSN
Sbjct: 69 AAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNI 128
Query: 464 EVDVGKTLSETEWIGMCRREVV 529
VD+G+TL E E+IGM RREV+
Sbjct: 129 AVDIGRTLKEHEYIGMVRREVL 150
Score = 120 bits (302), Expect(2) = 2e-69
Identities = 57/97 (58%), Positives = 75/97 (76%), Gaps = 2/97 (2%)
Frame = +3
Query: 531 DDYLRNRAQKLGANIVNGLFMRSEQ-QSAEGPFTIHYNSYEDGS-KMGKPATLEVDMIIG 704
D YLR RA+K GA ++NGLF++ + ++ + P+T+HY Y+ + G T+EVD +IG
Sbjct: 151 DAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIG 210
Query: 705 ADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKMKYY 815
ADGANSR+AK IDAG+YDYAIAFQERIRIPD+KM YY
Sbjct: 211 ADGANSRVAKSIDAGDYDYAIAFQERIRIPDEKMTYY 247
>emb|CAA07683.1| geranylgeranyl reductase [Nicotiana tabacum]
Length = 464
Score = 165 bits (417), Expect(2) = 5e-68
Identities = 78/107 (72%), Positives = 91/107 (84%)
Frame = +2
Query: 209 AVKDGAALEGRKLRVAVIGGGPSGACAAETLAKGGVETFLLERKLDNCKPCGGAIPLCMV 388
A K + GR LRVAV+GGGP+G AAETLAKGG+ETFL+ERK+DNCKPCGGAIPLCMV
Sbjct: 41 ASKSSPRVNGRNLRVAVVGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMV 100
Query: 389 EEFDLPMEIIDRRVTKMKMISPSNREVDVGKTLSETEWIGMCRREVV 529
EFDLP++IIDR+VTKMKMISPSN VD+G+TL E+IGM RREV+
Sbjct: 101 GEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVL 147
Score = 115 bits (289), Expect(2) = 5e-68
Identities = 55/97 (56%), Positives = 75/97 (76%), Gaps = 2/97 (2%)
Frame = +3
Query: 531 DDYLRNRAQKLGANIVNGLFMRSEQQSA-EGPFTIHYNSYEDGSK-MGKPATLEVDMIIG 704
D YLR+RA + GA+++NGLF++ + A P+ +HY +Y+ + G+ TLEVD +IG
Sbjct: 148 DAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTNGAGEKRTLEVDAVIG 207
Query: 705 ADGANSRIAKEIDAGEYDYAIAFQERIRIPDDKMKYY 815
ADGANSR+AK I+AG+Y+YAIAFQERI+I DDKMKYY
Sbjct: 208 ADGANSRVAKSINAGDYEYAIAFQERIKISDDKMKYY 244
EST assemble image
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clone |
accession |
position |
| 1 |
MXL065h01_r |
BP096847 |
1 |
349 |
| 2 |
MXL002e12_r |
BP093045 |
3 |
349 |
| 3 |
MXL040g12_r |
BP095374 |
3 |
458 |
| 4 |
LCL029h03_r |
AV627637 |
5 |
544 |
| 5 |
LCL039f02_r |
AV628287 |
127 |
515 |
| 6 |
LC065g12_r |
AV623576 |
266 |
816 |
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Chlamydomonas reinhardtii
Kazusa DNA Research Institute