>KCC002967A_C01 KCC002967A_c01
gatgcagtagcagacacTTGTTACTGGACAATACATATAATACCCAGCGCCAGGCCCCCG
CTATTTCGCGACTAGTGCTACTGCCCTTAATTTCTGCACAGACCTAACCCGGCACAAGCG
TTAAGTTGGCTTTACAATTTGACAGTCCCACCCAAGCTCCTGCGACCCTTCGTTAACCCC
AGGCCCAGGCACCTTCCTTCCTGAACCAGAGCAAATGAAGCTTGTAGGCGTGGGCCTGCT
TACCTACAAGGGCGATGCCACGCCGCCAGCGTTTATTGGAATGGCGGTGGACGTGTCAAA
CTTCGGGTACTTCCAGCGCGGAGCTGTCCGCGAGGGCATCATGTTCATCGCGCGAACTAT
CACGCAGCGCACGGCGCCGGGCATGCGGCAAACCGTGAAGAACGAGGAGTACCTGTGTCA
CGTGCACGTGAAGGACAACGGCGTTGCCGGCATCGTAGTGGCGGACGGGGAGTACCCCAC
CACAGCGGCCTTCTCGGTCATCGGCAAGGTGCTGGACGATTTCATGCAGCAGCATGCGAA
C

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002967A_C01 KCC002967A_c01
         (541 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC26834.1| prenylated SNARE protein Ykt6 [Mus musculus]            99  4e-20
ref|NP_062635.2| SNARE protein Ykt6 [Mus musculus] gi|12833253|d...    99  5e-20
gb|AAC72948.1| SNARE protein Ykt6 [Homo sapiens]                       98  6e-20
gb|AAP36789.1| Homo sapiens SNARE protein Ykt6 [synthetic constr...    98  6e-20
ref|NP_006546.1| SNARE protein Ykt6; YKT6, S. cerevisiae, homolo...    98  6e-20

>gb|AAC26834.1| prenylated SNARE protein Ykt6 [Mus musculus]
          Length = 198

 Score = 99.0 bits (245), Expect = 4e-20
 Identities = 48/106 (45%), Positives = 74/106 (69%)
 Frame = +2

Query: 215 MKLVGVGLLTYKGDATPPAFIGMAVDVSNFGYFQRGAVREGIMFIARTITQRTAPGMRQT 394
           MKL  + +L YKGD      +  A DVS+F +FQR +V+E + F ++ I +R+  G R +
Sbjct: 1   MKLYSLSVL-YKGDPKA-VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRAS 58

Query: 395 VKNEEYLCHVHVKDNGVAGIVVADGEYPTTAAFSVIGKVLDDFMQQ 532
           VK +EYLCHV+V+ + +AG+V+AD EYP+  AF+++ KVLD+F +Q
Sbjct: 59  VKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLDKVLDEFSKQ 104

>ref|NP_062635.2| SNARE protein Ykt6 [Mus musculus] gi|12833253|dbj|BAB22455.1|
           unnamed protein product [Mus musculus]
           gi|12841062|dbj|BAB25062.1| unnamed protein product [Mus
           musculus] gi|13879560|gb|AAH06760.1| SNARE protein Ykt6
           [Mus musculus]
          Length = 198

 Score = 98.6 bits (244), Expect = 5e-20
 Identities = 48/106 (45%), Positives = 74/106 (69%)
 Frame = +2

Query: 215 MKLVGVGLLTYKGDATPPAFIGMAVDVSNFGYFQRGAVREGIMFIARTITQRTAPGMRQT 394
           MKL  + +L YKGD      +  A DVS+F +FQR +V+E + F ++ I +R+  G R +
Sbjct: 1   MKLYSLSVL-YKGDPKA-VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRAS 58

Query: 395 VKNEEYLCHVHVKDNGVAGIVVADGEYPTTAAFSVIGKVLDDFMQQ 532
           VK +EYLCHV+V+ + +AG+V+AD EYP+  AF+++ KVLD+F +Q
Sbjct: 59  VKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQ 104

>gb|AAC72948.1| SNARE protein Ykt6 [Homo sapiens]
          Length = 191

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 47/106 (44%), Positives = 77/106 (72%)
 Frame = +2

Query: 215 MKLVGVGLLTYKGDATPPAFIGMAVDVSNFGYFQRGAVREGIMFIARTITQRTAPGMRQT 394
           MKL  + +L YKG+A     +  A DVS+F +FQR +V+E + F ++ I +R++ G R +
Sbjct: 1   MKLYSLSVL-YKGEAKV-VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRAS 58

Query: 395 VKNEEYLCHVHVKDNGVAGIVVADGEYPTTAAFSVIGKVLDDFMQQ 532
           VK ++YLCHV+V+++ +AG+V+AD EYP+  AF+++ KVLD+F +Q
Sbjct: 59  VKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQ 104

>gb|AAP36789.1| Homo sapiens SNARE protein Ykt6 [synthetic construct]
          Length = 199

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 47/106 (44%), Positives = 77/106 (72%)
 Frame = +2

Query: 215 MKLVGVGLLTYKGDATPPAFIGMAVDVSNFGYFQRGAVREGIMFIARTITQRTAPGMRQT 394
           MKL  + +L YKG+A     +  A DVS+F +FQR +V+E + F ++ I +R++ G R +
Sbjct: 1   MKLYSLSVL-YKGEAKV-VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRAS 58

Query: 395 VKNEEYLCHVHVKDNGVAGIVVADGEYPTTAAFSVIGKVLDDFMQQ 532
           VK ++YLCHV+V+++ +AG+V+AD EYP+  AF+++ KVLD+F +Q
Sbjct: 59  VKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQ 104

>ref|NP_006546.1| SNARE protein Ykt6; YKT6, S. cerevisiae, homolog of [Homo sapiens]
           gi|2507637|gb|AAB81131.1| SNARE protein Ykt6 [Homo
           sapiens] gi|13938372|gb|AAH07319.1| SNARE protein Ykt6
           [Homo sapiens] gi|30582995|gb|AAP35741.1| SNARE protein
           Ykt6 [Homo sapiens]
          Length = 198

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 47/106 (44%), Positives = 77/106 (72%)
 Frame = +2

Query: 215 MKLVGVGLLTYKGDATPPAFIGMAVDVSNFGYFQRGAVREGIMFIARTITQRTAPGMRQT 394
           MKL  + +L YKG+A     +  A DVS+F +FQR +V+E + F ++ I +R++ G R +
Sbjct: 1   MKLYSLSVL-YKGEAKV-VLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRAS 58

Query: 395 VKNEEYLCHVHVKDNGVAGIVVADGEYPTTAAFSVIGKVLDDFMQQ 532
           VK ++YLCHV+V+++ +AG+V+AD EYP+  AF+++ KVLD+F +Q
Sbjct: 59  VKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQ 104

EST assemble image

clone accession position 1 LC063a12_r AV623390 1 541 2 LC070e06_r AV623922 18 464

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