Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002964A_C01 KCC002964A_c01
(523 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200667.2| Ran binding protein 1 homolog - like [Arabidops... 122 2e-27
dbj|BAA97328.1| contains similarity to small GTPase Ran binding ... 122 2e-27
emb|CAA66045.1| atranbp1a [Arabidopsis thaliana] 121 5e-27
ref|NP_172194.1| Ran-binding protein (atranbp1a) [Arabidopsis th... 121 5e-27
ref|NP_180567.1| Ran binding protein (AtRanBP1b) [Arabidopsis th... 119 2e-26
>ref|NP_200667.2| Ran binding protein 1 homolog - like [Arabidopsis thaliana]
gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
[Arabidopsis thaliana]
Length = 219
Score = 122 bits (307), Expect = 2e-27
Identities = 57/106 (53%), Positives = 77/106 (71%)
Frame = +2
Query: 206 EEGGDEDGGDAAPEEECQAEFKPVVQLDEVETKSGEEDEDSLVDLKCKLYRFDGDNNEWK 385
E ED + +E+ A+ P+V+L+EV +GEEDED+++DLK K+YRFD + N+WK
Sbjct: 7 ERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWK 66
Query: 386 ERGLGLIKLLQHKENKKVRLLMRQEKTLKIRANHIVMPGTKLQEHS 523
ERG G +KLL+HKE KVRL+MRQ KTLKI ANH++ G +QEHS
Sbjct: 67 ERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHS 112
>dbj|BAA97328.1| contains similarity to small GTPase Ran binding protein
1~gene_id:MZN1.4 [Arabidopsis thaliana]
Length = 248
Score = 122 bits (307), Expect = 2e-27
Identities = 57/106 (53%), Positives = 77/106 (71%)
Frame = +2
Query: 206 EEGGDEDGGDAAPEEECQAEFKPVVQLDEVETKSGEEDEDSLVDLKCKLYRFDGDNNEWK 385
E ED + +E+ A+ P+V+L+EV +GEEDED+++DLK K+YRFD + N+WK
Sbjct: 7 ERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWK 66
Query: 386 ERGLGLIKLLQHKENKKVRLLMRQEKTLKIRANHIVMPGTKLQEHS 523
ERG G +KLL+HKE KVRL+MRQ KTLKI ANH++ G +QEHS
Sbjct: 67 ERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHS 112
>emb|CAA66045.1| atranbp1a [Arabidopsis thaliana]
Length = 234
Score = 121 bits (304), Expect = 5e-27
Identities = 58/111 (52%), Positives = 76/111 (68%)
Frame = +2
Query: 188 APKPADEEGGDEDGGDAAPEEECQAEFKPVVQLDEVETKSGEEDEDSLVDLKCKLYRFDG 367
A + E DE+ A +E+ A+ P+V+L+EV +GEEDED+++DLK KLYRFD
Sbjct: 2 ATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDK 61
Query: 368 DNNEWKERGLGLIKLLQHKENKKVRLLMRQEKTLKIRANHIVMPGTKLQEH 520
D N+WKERG G +K L+HK K+RL+MRQ KTLKI ANH V G +QEH
Sbjct: 62 DANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEH 112
>ref|NP_172194.1| Ran-binding protein (atranbp1a) [Arabidopsis thaliana]
gi|25406956|pir||D86206 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8954032|gb|AAF82206.1|AC067971_14 Identical to
atranbp1a from Arabidopsis thaliana gb|X97377. It
contains a RanBP1 domain PF|00638. ESTs gb|H76544,
gb|H76880, gb|AA389814, gb|AA712542, gb|T88156,
gb|N65434 and gb|AA712288 come from this gene
gi|13877581|gb|AAK43868.1|AF370491_1 Unknown protein
[Arabidopsis thaliana]
gi|15294206|gb|AAK95280.1|AF410294_1 At1g07140/F10K1_27
[Arabidopsis thaliana] gi|20453283|gb|AAM19880.1|
At1g07140/F10K1_27 [Arabidopsis thaliana]
gi|25084245|gb|AAN72204.1| Unknown protein [Arabidopsis
thaliana]
Length = 228
Score = 121 bits (304), Expect = 5e-27
Identities = 58/111 (52%), Positives = 76/111 (68%)
Frame = +2
Query: 188 APKPADEEGGDEDGGDAAPEEECQAEFKPVVQLDEVETKSGEEDEDSLVDLKCKLYRFDG 367
A + E DE+ A +E+ A+ P+V+L+EV +GEEDED+++DLK KLYRFD
Sbjct: 2 ATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDK 61
Query: 368 DNNEWKERGLGLIKLLQHKENKKVRLLMRQEKTLKIRANHIVMPGTKLQEH 520
D N+WKERG G +K L+HK K+RL+MRQ KTLKI ANH V G +QEH
Sbjct: 62 DANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEH 112
>ref|NP_180567.1| Ran binding protein (AtRanBP1b) [Arabidopsis thaliana]
gi|7484994|pir||T00592 GTP-binding protein RanBP1b
homolog T27E13.20 - Arabidopsis thaliana
gi|3150414|gb|AAC16966.1| Ran binding protein
(AtRanBP1b) [Arabidopsis thaliana]
gi|20197228|gb|AAM14982.1| Ran binding protein
(AtRanBP1b) [Arabidopsis thaliana]
Length = 217
Score = 119 bits (298), Expect = 2e-26
Identities = 55/107 (51%), Positives = 78/107 (72%)
Frame = +2
Query: 203 DEEGGDEDGGDAAPEEECQAEFKPVVQLDEVETKSGEEDEDSLVDLKCKLYRFDGDNNEW 382
+ E DE+ A +E+ A+ P+V+L+EV +GEEDED+++DLK KLYRFD D ++W
Sbjct: 9 ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68
Query: 383 KERGLGLIKLLQHKENKKVRLLMRQEKTLKIRANHIVMPGTKLQEHS 523
KERG G +K L+H+ + K+RL+MRQ KTLKI ANH+V G +QEH+
Sbjct: 69 KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHA 115
